KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:29 2014 Check: 00 .. Name: ENSP00000454646/1-462 Len: 463 Check: 359 Weight: 1.00 Name: ENSBTAP00000009438/1-463 Len: 463 Check: 498 Weight: 1.00 Name: BACU018067/1-430 Len: 463 Check: 3484 Weight: 1.00 Name: bmy_05656T0/1-463 Len: 463 Check: 281 Weight: 1.00 Name: ENSTTRP00000009419/1-463 Len: 463 Check: 449 Weight: 1.00 // 1 50 ENSP00000454646/1-462 MAQVSINNDY SEWDLSTDAG ERARLLQSPC VDTAPKSEWE ASPGGLDRGT ENSBTAP00000009438/1-463 MAQVSINRDL GEWGLSTDSG ERARLLQSPS VDIAPKSEGE APPGGVGGGT BACU018067/1-430 MAQVSINSDL GEWGLSTDSG ERARLLQSPS VDIAPKSEGE APPGGLGRGT bmy_05656T0/1-463 MAQVSINSDL GEWGLSTDSG ERARLLQSPS VDIAPKSEGE ALPGGLGRGT ENSTTRP00000009419/1-463 MAQVSINSDL GEWGLSTDSG ERARLLQSPS VDIAPKSEGE APPGGLGRGT 51 100 ENSP00000454646/1-462 TSTLGAIFIV VNACLGAGLL NFPAAFSTAG GVAAGIALQM GMLVFIISGL ENSBTAP00000009438/1-463 TSTLGAIFIV VNACLGAGLL NFPAAFSTAG GVAAGITLQM AMLVFIISGL BACU018067/1-430 TSTLGAIFIV VNACLGAGLL NFPAAFSTAG GVAAGITLQM AMLVFIISGL bmy_05656T0/1-463 TSTLGAIFIV VNACLGAGLL NFPAAFSTAG GVAAGITLQM AMLVFIISGL ENSTTRP00000009419/1-463 TSTLGAIFIV VNACLGAGLL NFPAAFSTAG GVAAGITLQM AMLVFIISGL 101 150 ENSP00000454646/1-462 VILAYCSQAS NERTYQEVVW AVCGKLTGVL CEVAIAVYTF GTCIAFLIII ENSBTAP00000009438/1-463 VILAYCSQAS NERTYQEVVW AVCGKLTGVL CEVAIATYTF GTCIAFLIII BACU018067/1-430 VILAYCSQAS NERTYQEVVW AVCGKLTGVL CEVAIATYTF GTCIAFLIII bmy_05656T0/1-463 VILAYCSQAS NERTYQEVVW AVCGKLTGVL CEVAIATYTF GTCIAFLIII ENSTTRP00000009419/1-463 VILAYCSQAS NERTYQEVVW AVCGKLTGVL CEVAIATYTF GTCIAFLIII 151 200 ENSP00000454646/1-462 GDQQDKIIAV MAKEPEGASG -PWYTDRKFT ISLTAFLFIL PLSIPREIGF ENSBTAP00000009438/1-463 GDQQDKIIAV MAKEPEGPGG SPWYTDRKFT ISLTAFLFIL PLSIPREIGF BACU018067/1-430 GDQQDKIIAV MAKEPEGAGG SPWYTDRKFT ISLTAFLFIL PLSIPREIGF bmy_05656T0/1-463 GDQQDKIIAV MAKEPEGAGG SPWYTDRKFT ISLTAFLFIL PLSIPREIGF ENSTTRP00000009419/1-463 GDQQDKIIAV MAKEPEGAGG SPWYTDRKFT ISLTAFLFIL PLSIPREIGF 201 250 ENSP00000454646/1-462 QKYASFLSVV GTWYVTAIVI IKYIWPDKEM TPGNILTRPA SWMAVFNAMP ENSBTAP00000009438/1-463 QKYASFLSVV GTWYVTAIII IKYIWPDKEM TPADILNRPA SWIAVFNAMP BACU018067/1-430 QKYA------ ---------- ---------- -------RPA SWIAVFNAMP bmy_05656T0/1-463 QKYASFLSVV GTWYVTAIVI IKYIWPDKEM TPADILNRPA SWIAVFNAMP ENSTTRP00000009419/1-463 QKYASFLSVV GTWYVTAIVI IKYIWPDKEM TPADILNRPA SWIAVFNAMP 251 300 ENSP00000454646/1-462 TICFGFQCHV SSVPVFNSMQ QPEVKTWGGV VTAAMVIALA VYMGTGICGF ENSBTAP00000009438/1-463 TICFGFQCHV SSVPVFNSMR QPEVKTWGGV VTAAMVIALA VYMGTGICGF BACU018067/1-430 TICFGFQCHV SSVPVFNSMR QPEVKTWGGV VTAAMVIALA VYMGTGICGF bmy_05656T0/1-463 TICFGFQCHV SSVPVFNSMR RPEVKTWGGV VTAAMVIALA VYMGTGICGF ENSTTRP00000009419/1-463 TICFGFQCHV SSVPVFNSMR RPEVKTWGGV VTAAMVIALA VYMGTGICGF 301 350 ENSP00000454646/1-462 LTFGAAVDPD VLLSYPSEDM AVAVARAFII LSVLTSYPIL HFCGRAVVEG ENSBTAP00000009438/1-463 LTFGDAVDPD VLLSYPSEDM AVAVARAFII LSVLTSYPIL HFCGRAVIEG BACU018067/1-430 LTFGAAVDPD VLLSYPSEDM AVAVARAFII LSVLTSYPIL HFCGRAVVEG bmy_05656T0/1-463 LTFGAAVDPD VLLSYPSEDM AVAVARAFII LSVLTSYPIL HFCGRAVVEG ENSTTRP00000009419/1-463 LTFGAAVDPD VLLSYPSEDM AVAVARAFII LSVLTSYPIL HFCGRAVVEG 351 400 ENSP00000454646/1-462 LWLRYQGVPV EEDVGRERRR RVLQTLVWFL LTLLLALFIP DIGKVISVIG ENSBTAP00000009438/1-463 LWLRYQGMPV EEDVGRERRR RVLQTLVWFL LTLLLALFIP DIGKVISVIG BACU018067/1-430 LWLRYQGMPV EEDVGRERRR RVLQTLVWFL LTLLLALFIP DIGKVISVIG bmy_05656T0/1-463 LWLRYQGMPV EEDVGRERRR RVLQTLVWFL LTLLLALFIP DIGKVISVIG ENSTTRP00000009419/1-463 LWLRYQGMPV EEDVGRERRR RVLQTLVWFL LTLLLALFIP DIGKVISVIG 401 450 ENSP00000454646/1-462 GLAACFIFVF PGLCLIQAKL SEMEEVKPAS WWVLVSYGVL LVTLGAFIFG ENSBTAP00000009438/1-463 GLAACFIFVF PGLCLIQAKL SEMEEVKPAS WWAMVSYGVL LVTLGAFIFG BACU018067/1-430 GLAACFIFVF PGLCLIQAKL SEMEEVKPAS WWAMVSYGVL LITLGAFIFG bmy_05656T0/1-463 GLAACFIFVF PGLCLIQAKL SEMEEVKPAS WWAMVSYGVL LVTLGAFIFG ENSTTRP00000009419/1-463 GLAACFIFVF PGLCLIQAKL SEMEEVKPAS WWAMVSYGVL LVTLGAFIFG 451 500 ENSP00000454646/1-462 QTTANAIFVD LLA ENSBTAP00000009438/1-463 QTTANAIFVD LLA BACU018067/1-430 QTTANAIFVD LLA bmy_05656T0/1-463 QTTANAIFVD LLA ENSTTRP00000009419/1-463 QTTANAIFVD LLA