KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:30 2014 Check: 00 .. Name: ENSTTRP00000009427/1-358 Len: 492 Check: 9471 Weight: 1.00 Name: ENSP00000245206/1-430 Len: 492 Check: 5113 Weight: 1.00 Name: ENSBTAP00000009440/1-430 Len: 492 Check: 6824 Weight: 1.00 Name: bmy_05655T0/1-492 Len: 492 Check: 7599 Weight: 1.00 Name: BACU018066/1-430 Len: 492 Check: 8005 Weight: 1.00 // 1 50 ENSTTRP00000009427/1-358 ---------- ---------- ---------- ---------- ---------- ENSP00000245206/1-430 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009440/1-430 ---------- ---------- ---------- ---------- ---------- bmy_05655T0/1-492 QAAPLRPPGC AVTRLGAWRE AALASPGEVA VLTFSRTPRL RVRARWHLRS BACU018066/1-430 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009427/1-358 ---------- --MALLHSGR VLSGIAAAFH PGVAAAASAR ASSWWAHVEM ENSP00000245206/1-430 ---------- --MALLHSGR VLPGIAAAFH PGLAAAASAR ASSWWTHVEM ENSBTAP00000009440/1-430 ---------- --MALLHSGR FLSGVAAAFH PGLAAAASAR ASSWWAHVEM bmy_05655T0/1-492 VLQLPTALLP PTMALLHSGR VLSGVAAAFH PGLAAAASAR ASSWWAQVEM BACU018066/1-430 ---------- --MALLHSGR VLSGVAAAFH PGLAAAASAR ASSWWAHVEM 101 150 ENSTTRP00000009427/1-358 GPPDPILGVT EAFKRDTNSK KMNLGVGAYR DDNGKPYVLP SVRKAEAQIA ENSP00000245206/1-430 GPPDPILGVT EAFKRDTNSK KMNLGVGAYR DDNGKPYVLP SVRKAEAQIA ENSBTAP00000009440/1-430 GPPDPILGVT EAFKRDTNSK KMNLGVGAYR DDNGKPYVLP SVRKAEAQIA bmy_05655T0/1-492 GPPDPILGVT EAYKRDTNSK KMNLGVGAYR DDNGKPYVLP SVRKAEAQIA BACU018066/1-430 GPPDPILGVT EAYKRDTNSK KMNLGVGAYR DDNGKPYVLP SVRKAEAQIA 151 200 ENSTTRP00000009427/1-358 ARNLDKEYLP IGGLAEFCKA SAELALGESN EVLKSGRXXX XXXXXXXXXX ENSP00000245206/1-430 AKNLDKEYLP IGGLAEFCKA SAELALGENS EVLKSGRFVT VQTISGTGAL ENSBTAP00000009440/1-430 AKNLDKEYLP IAGLAEFCKA SAELALGENN EVLKSGRYVT VQTISGTGAL bmy_05655T0/1-492 ARSLDKEYLP IGGLAEFCKA SAELALGENN EVLKSGRYIT VQTISGTGAL BACU018066/1-430 ARSLDKEYLP IGGLAEFCKA SAELALGENN EVLKSGRYIT VQTISGTGAL 201 250 ENSTTRP00000009427/1-358 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000245206/1-430 RIGASFLQRF FKFSRDVFLP KPTWGNHTPI FRDAGMQLQG YRYYDPKTCG ENSBTAP00000009440/1-430 RIGASFLQRF FKFSRDVFLP KPTWGNHTPI FRDAGMQLQS YRYYDPKTCG bmy_05655T0/1-492 RIGANFLQRF FKFSRDVFLP KPSWGNHTPI FRDAGMQLHS YRYYDPKTCG BACU018066/1-430 RIGANFLQRF FKFSRDVFLP KPSWGNHTPI FRDAGMQLHS YRYYDPKTCG 251 300 ENSTTRP00000009427/1-358 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXQWKE MAAVVKKNNL ENSP00000245206/1-430 FDFTGAVEDI SKIPEQSVLL LHACAHNPTG VDPRPEQWKE IATVVKKRNL ENSBTAP00000009440/1-430 FDFTGAIEDI SKIPAQSVIL LHACAHNPTG VDPRPEQWKE MATVVKKNNL bmy_05655T0/1-492 FDFTGAVEDI SKIPAQSVIL LHACAHNPTG VDPRPEQWKE MAAVVKKNNL BACU018066/1-430 FDFTGAIEDI SKIPAQSVIL LHACAHNPTG VDPRPEQWKE MAAVVKKNNL 301 350 ENSTTRP00000009427/1-358 FAFFDMAYQG FASGDGNKDA WAVRYFIEQG INVCLCQSYA KNMGLYGERV ENSP00000245206/1-430 FAFFDMAYQG FASGDGDKDA WAVRHFIEQG INVCLCQSYA KNMGLYGERV ENSBTAP00000009440/1-430 FAFFDMAYQG FASGDGNKDA WAVRHFIEQG INVCLCQSYA KNMGLYGERV bmy_05655T0/1-492 FAFFDMAYQG FASGDGNKDA WAVRHFIEQG INVCLCQSYA KNMGLYGERV BACU018066/1-430 FAFFDMAYQG FASGDGNKDA WAVRHFIEQG INVCLCQSYA KNMGLYGERV 351 400 ENSTTRP00000009427/1-358 GAFTVVCKDA DEAKRVESQL KILIRPMYSN PPLNGARIAS TILTSPDLRK ENSP00000245206/1-430 GAFTMVCKDA DEAKRVESQL KILIRPMYSN PPLNGARIAA AILNTPDLRK ENSBTAP00000009440/1-430 GAFTVVCKDA EEAKRVESQL KILIRPMYSN PPINGARIAS TILTSPDLRK bmy_05655T0/1-492 GAFTVVCKDA DEAKRVESQL KILIRPMYSN PPLNGARIAS TILTSPDLRK BACU018066/1-430 GAFTVVCKDA DEAKRVESQL KILIRPMYSN PPLNGARIAS TILTSPDLRK 401 450 ENSTTRP00000009427/1-358 QWLQEVKGMA DRIISMRTQL ---------- ---------- ---------- ENSP00000245206/1-430 QWLQEVKVMA DRIIGMRTQL VSNLKKEGST HNWQHITDQI GMFCFTGLKP ENSBTAP00000009440/1-430 QWLHEVKGMA DRIISMRTQL VSNLKKEGSS HNWQHIIDQI GMFCYTGLKP bmy_05655T0/1-492 QWLQEVKGMA DRIISMRTQL VSNLKKEGSS HNWQHIVDQI GMFCFTGLKP BACU018066/1-430 QWLQEVKGMA DRIISMRTQL VSNLKKEGSS HNWQHIVDQI GMFCFTGLKP 451 500 ENSTTRP00000009427/1-358 ---------- ---------- ---------- ---------- -- ENSP00000245206/1-430 EQVERLIKEF SIYMTKDGRI SVAGVTSSNV GYLAHAIHQV TK ENSBTAP00000009440/1-430 EQVERLTKEF SIYMTKDGRI SVAGVTSGNV AYLAHAIHQV TK bmy_05655T0/1-492 EQVERLTKEF SIYMTKDGRI SVAGVTSGNV GYLAHAIHQV TK BACU018066/1-430 EQVERLTKEF SIYMTKDGRI SVAGVTSGNV GYLAHAIHQV TK