KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:31 2014 Check: 00 .. Name: ENSTTRP00000013076/1-260 Len: 273 Check: 6304 Weight: 1.00 Name: ENSBTAP00000009461/1-261 Len: 273 Check: 94 Weight: 1.00 Name: ENSP00000321239/1-261 Len: 273 Check: 9931 Weight: 1.00 Name: bmy_10639T0/1-237 Len: 273 Check: 9775 Weight: 1.00 Name: BACU000792/1-261 Len: 273 Check: 577 Weight: 1.00 // 1 50 ENSTTRP00000013076/1-260 MAALAREDGA RGQVQGRRGC EHYDRGCLL- APCCDKLYSC RLCHDNNEDH ENSBTAP00000009461/1-261 MAFSALEDGA RGQAQRRRGC EHYDRGCLLK APCCDKLYTC RLCHDNNEDH ENSP00000321239/1-261 MAATAREDGA SGQERGQRGC EHYDRGCLLK APCCDKLYTC RLCHDNNEDH bmy_10639T0/1-237 MAASAREDGA RGQAQGRRGC EHYDRGCLLK APCCDKLYSC RLCHDNNEDH BACU000792/1-261 MAASAWEDGA RGQAQGRRGC EHYDRGCRLK APCCDKLYSC RLCHDNSEDH 51 100 ENSTTRP00000013076/1-260 LLDRFKVKEV QCINCEKIQR AQQTCEECST LFGEYYCSTC HLFDKDKKQY ENSBTAP00000009461/1-261 QLDRFKVKEV QCINCEKIQH AQQTCEECST LFGEYYCSVC HLFDKDKKQY ENSP00000321239/1-261 QLDRFKVKEV QCINCEKIQH AQQTCEECST LFGEYYCDIC HLFDKDKKQY bmy_10639T0/1-237 LLDRFKVKEV QCINCEKIQR ---------- ---------- ---------- BACU000792/1-261 LLDRFKVKEV QCINCEKIQR AQQTCEECST LFGEYYCSMC HLFDKDKKQY 101 150 ENSTTRP00000013076/1-260 HCEDCGICRI GPKEDFFHCL KCNLCLTVNL QGKHK----- -------XXX ENSBTAP00000009461/1-261 HCENCGICRI GPKEDFFHCL KCNLCLAMNL QGKHK----- -------CIE ENSP00000321239/1-261 HCENCGICRI GPKEDFFHCL KCNLCLAMNL QGRHK----- -------CIE bmy_10639T0/1-237 ------LLKI GPKEDFFHCL KCNLCLTINL QGKHKLSFGN FSFAFKQCIE BACU000792/1-261 HCENCGICRI GPKEDFFHCL KCNLCLTINL QGKHK----- -------CIE 151 200 ENSTTRP00000013076/1-260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000009461/1-261 NVSRQNCPIC LEDIHTSRIA AQVLPCGHLL HRTCYEDMLK EGYRCPLCMR ENSP00000321239/1-261 NVSRQNCPIC LEDIHTSRVV AHVLPCGHLL HRTCYEEMLK EGYRCPLCMH bmy_10639T0/1-237 NVSRQNCPVC LEDIHTSRIV AHVLPCGHLL HRTCYEEMLK EGYRCPLCMR BACU000792/1-261 NVSRQNCPIC LEDIHTSRIV AHVLPCGHLL HRTCYEEMLK EGYRCPLCMH 201 250 ENSTTRP00000013076/1-260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XILCNDCNGK STVQFHILGM ENSBTAP00000009461/1-261 SALDMSRSWR QRDDEVAQTP MPSEYQNMTV DILCNDCNGR STVQFHILGM ENSP00000321239/1-261 SALDMTRYWR QLDDEVAQTP MPSEYQNMTV DILCNDCNGR STVQFHILGM bmy_10639T0/1-237 SALDMTRYWR QLDDEVAQTP MPSEYQNMTV DILCNDCNGK STVQFHILGM BACU000792/1-261 SALDMTRYWR QLDDEVAQTP MPSEYQNMTV DILCNDCNGK STVQFHILGM 251 300 ENSTTRP00000013076/1-260 KCNICESYNT AQSGGCRISV DQQ ENSBTAP00000009461/1-261 KCNICESYNT AQAGKYRISI DQQ ENSP00000321239/1-261 KCKICESYNT AQAGGRRISL DQQ bmy_10639T0/1-237 KCNICESYNT AQSGGGRISV DQQ BACU000792/1-261 KCNICESYNT AQSGGRRISV DQQ