KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:38:34 2014 Check: 00 .. Name: bmy_08077T0/1-862 Len: 901 Check: 4868 Weight: 1.00 Name: ENSTTRP00000008011/1-836 Len: 901 Check: 3912 Weight: 1.00 Name: ENSBTAP00000009480/1-834 Len: 901 Check: 5876 Weight: 1.00 Name: ENSP00000249344/1-834 Len: 901 Check: 6423 Weight: 1.00 // 1 50 bmy_08077T0/1-862 MEDPAAPGVG NPPANGYSNC NGNGGGKGKP AAPKGRETFR SQRRESEGSV ENSTTRP00000008011/1-836 MEDPAAPGSG NPPANGYG-- NGNGGGKGKP AAPKGRETFR SQRRESEGSV ENSBTAP00000009480/1-834 MEDPAAPGAG NPPTN--G-- NGNGGGKGKP AAPKGREAFR SQRRESEGSV ENSP00000249344/1-834 MEDPAAPGTG GPPAN--G-- NGNGGGKGKQ AAPKGREAFR SQRRESEGSV 51 100 bmy_08077T0/1-862 DCPTLEFEYG DTDGHAAELS ELYSYTENPE FTTNRRCFEE DFKTQEFPIS ENSTTRP00000008011/1-836 DCPTLEFEYG DTDGHAAELS ELYSYTEHPE FTTNRRCFEE DFKTQ----- ENSBTAP00000009480/1-834 DCPTLEFEYG DADGHAAELS ELYSYTENPE FTTNRRCFEE DFKTQ----- ENSP00000249344/1-834 DCPTLEFEYG DADGHAAELS ELYSYTENLE FTNNRRCFEE DFKTQ----- 101 150 bmy_08077T0/1-862 QVERSWSGSK RSLNWVPFPD VKGPENRGMG RWGWTGSLLP AKQGKLLKRR ENSTTRP00000008011/1-836 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009480/1-834 ---------- ---------- ---------- ---------- ---------- ENSP00000249344/1-834 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_08077T0/1-862 IYWGAEIRVQ GKEWLELEED AQKAYVMGLL DRLEVVSRER RLKVARAVLY ENSTTRP00000008011/1-836 --------VQ GKEWLELEED AQKAYVMGLL DRLEVVSRER RLKVARAVLY ENSBTAP00000009480/1-834 --------VQ GEEWLELEED AQKAYVMGLL DRLEVVSRER RLKVARAVLY ENSP00000249344/1-834 --------VQ GKEWLELEED AQKAYIMGLL DRLEVVSRER RLKVARAVLY 201 250 bmy_08077T0/1-862 LAQGTFGECD SEVDVLHWSR YNCFLLYQMG TFSAFLELLH MEIE------ ENSTTRP00000008011/1-836 LAQGTFGECD SEVDVLHWSR YNCFLLYQMG TFSAFLELLH MEIDNSQACS ENSBTAP00000009480/1-834 LAQGTFGECD SEVDVLHWSR YNCFLLYQMG TFSAFLELLH MEIDNSQACS ENSP00000249344/1-834 LAQGTFGECD SEVDVLHWSR YNCFLLYQMG TFSTFLELLH MEIDNSQACS 251 300 bmy_08077T0/1-862 -----PVAVL FGNQPSPLLI A--------- ------QSSG ---------- ENSTTRP00000008011/1-836 SALRKPAISI ADSTELRVLL SVIYLMVENI RLERETDSYG WRTARETFRT ENSBTAP00000009480/1-834 SALRKPAISI ADSTELRVLL SVLYLMVENI RLERETDSCG WRTARETFRT ENSP00000249344/1-834 SALRKPAVSI ADSTELRVLL SVMYLMVENI RLERETDPCG WRTARETFRT 301 350 bmy_08077T0/1-862 ---FSMHNEE PFALLLFSMV TKFCSGLAPH FPIKKVLLLL WKVVMFTLGG ENSTTRP00000008011/1-836 ELSFSMHNEE PFALLLFSMV TKFCSGLAPH FPIKKVLLLL WKVVMFTLGG ENSBTAP00000009480/1-834 ELSFSTHNQE PFALLLFSMV TKFCSGLAPH FPIKKVLLLL WKVVMFTLGG ENSP00000249344/1-834 ELSFSMHNEE PFALLLFSMV TKFCSGLAPH FPIKKVLLLL WKVVMFTLGG 351 400 bmy_08077T0/1-862 FEQLQALKVQ KREELGLPPL AEDSIQVVKS MRAASPPSYT LDLGESQLAP ENSTTRP00000008011/1-836 FEQLQALKVQ KREELGLPPL AEDSIQVVKS MRAASPPSYT LDLGESQLAP ENSBTAP00000009480/1-834 FEHLQALKVQ KRAELGLPPL AEDSIQVVKS MRAASPPSYT LDLGESQLAP ENSP00000249344/1-834 FEHLQTLKVQ KRAELGLPPL AEDSIQVVKS MRAASPPSYT LDLGESQLAP 401 450 bmy_08077T0/1-862 PPSKLRGRRG SRRQLLTKQD SLDIYNERDL FKTEEPATEE EEESAGDGER ENSTTRP00000008011/1-836 PPSKLRGRRG SRRQLLTKQD SLDIYNERDL FKTEEPATEE EEESAGDGER ENSBTAP00000009480/1-834 PPSKLRGRRG SRRQLLTKQD SLDIYNERDL FKTEEPATEE EEESASDGER ENSP00000249344/1-834 PPSKLRGRRG SRRQLLTKQD SLDIYNERDL FKTEEPATEE EEESAGDGER 451 500 bmy_08077T0/1-862 TLDGELDLLE QDPLVPPPPS QAPLSAERVA FPKGLPWTPK VRQKDIEHFL ENSTTRP00000008011/1-836 TLDGELDLLE QDPLVPPPPS QAPLSAERVA FPKGLPWTPK VRQKDIEHFL ENSBTAP00000009480/1-834 TLDGELDLLE QDPLVPPPPS QAPLSAERVA FPKGLPWAPK VRQKDIEHFL ENSP00000249344/1-834 TLDGELDLLE QDPLVPPPPS QAPLSAERVA FPKGLPWAPK VRQKDIEHFL 501 550 bmy_08077T0/1-862 EMSRNKFIGF TLGQDTDTLV GLPRPIHESV KTLKQHKYIS IADVQIKNEE ENSTTRP00000008011/1-836 EMSRNKFIGF TLGQDTDTLV GLPRPIHESV KTLKQHKYIS IADVQIKNEE ENSBTAP00000009480/1-834 EMSRNKFIGF TLGQDTDTLV GLPRPIHESV KTLKQHKYVS IADVQIKNEE ENSP00000249344/1-834 EMSRNKFIGF TLGQDTDTLV GLPRPIHESV KTLKQHKYIS IADVQIKNEE 551 600 bmy_08077T0/1-862 ELEKCPMSLG EEVVPETPCE ILYQGMLCSL PQYMIALLKI LLAAAPTSKA ENSTTRP00000008011/1-836 ELEKCPMSLG EEVVPETPCE ILYQGMLYSL PQYMIALLKI LLAAAPTSKA ENSBTAP00000009480/1-834 ELEKCPMSLG EEVVPETPCE ILYQGMLYSL PQYMIALLKI LLAAAPTSKA ENSP00000249344/1-834 ELEKCPMSLG EEVVPETPCE ILYQGMLYSL PQYMIALLKI LLAAAPTSKA 601 650 bmy_08077T0/1-862 KTDSINILAD VLPEEMPITV LQSMKLGIDV NRHKEIIVKS ISALLLLLLK ENSTTRP00000008011/1-836 KTDSINILAD VLPEEMPITV LQSMKLGIDV NRHKEIIVKS ISALLLLLLK ENSBTAP00000009480/1-834 KTDSINILAD VLPEEMPITV LQSMKLGIDV NRHKEIIVKS ISALLLLLLK ENSP00000249344/1-834 KTDSINILAD VLPEEMPITV LQSMKLGIDV NRHKEIIVKS ISTLLLLLLK 651 700 bmy_08077T0/1-862 HFKLNHIYQF EYVSQHLVFA NCIPLILKFF NQNILSYITA KNSISVLDYP ENSTTRP00000008011/1-836 HFKLNHIYQF EYVSQHLVFA NCIPLILKFF NQNILSYITA KNSISVLDYP ENSBTAP00000009480/1-834 HFKLNHIYQF EYVSQHLVFA NCIPLILKFF NQNILSYITA KNGISVLDYP ENSP00000249344/1-834 HFKLNHIYQF EYVSQHLVFA NCIPLILKFF NQNILSYITA KNSISVLDYP 701 750 bmy_08077T0/1-862 CCTIQDLPEL TTESLEAGDN NQFCWRNLFS CINLLRLLNK LTKWKHSRTM ENSTTRP00000008011/1-836 CCTIQDLPEL TTESLEAGDN NQFCWRNLFS CINLLRLLNK LTKWKHSRTM ENSBTAP00000009480/1-834 CCTIQDLPEL TTESLEAGDN NQFCWRNLFS CINLLRLLNK LTKWKHSRTM ENSP00000249344/1-834 CCTIQDLPEL TTESLEAGDN SQFCWRNLFS CINLLRLLNK LTKWKHSRTM 751 800 bmy_08077T0/1-862 MLVVFKSAPI LKRALKVKQA MLQLYVLKLL KIQTKYLGRQ WRKSNMKTMS ENSTTRP00000008011/1-836 MLVVFKSAPI LKRALKVKQA MLQLYVLKLL KIQTKYLGRQ WRKSNMKTMS ENSBTAP00000009480/1-834 MLVVFKSAPI LKRALKVKQA MLQLYVLKLL KIQTKYLGRQ WRKSNMKTMS ENSP00000249344/1-834 MLVVFKSAPI LKRALKVKQA MLQLYVLKLL KLQTKYLGRQ WRKSNMKTMS 801 850 bmy_08077T0/1-862 AIYQKVRHRM NDDWAYGNDI DARPWDFQAE ECTLRANIEA FNSRRYDRPQ ENSTTRP00000008011/1-836 AIYQKVRHRM NDDWAYGNDI DARPWDFQAE ECTLRANIEA FNSRRYDRPQ ENSBTAP00000009480/1-834 AIYQKVRHRM NDDWAYGNDI DARPWDFQAE ECTLRANIEA FNSRRYDRPQ ENSP00000249344/1-834 AIYQKVRHRM NDDWAYGNDI DARPWDFQAE ECTLRANIEA FNSRRYDRPQ 851 900 bmy_08077T0/1-862 DSEFSPVDNC LQSVLGQRLD LPEDFHYSYE LWLEREVFSQ PICWEELLQN ENSTTRP00000008011/1-836 DSEFSPVDNC LQSVLGQRLD LPEDFHYSYE LWLEREVFSQ PICWEELLQN ENSBTAP00000009480/1-834 DSEFSPVDNC LQSVLGQRLD LPEDFHYSYE LWLEREVFSQ PICWEELLQN ENSP00000249344/1-834 DSEFSPVDNC LQSVLGQRLD LPEDFHYSYE LWLEREVFSQ PICWEELLQN 901 950 bmy_08077T0/1-862 H ENSTTRP00000008011/1-836 H ENSBTAP00000009480/1-834 H ENSP00000249344/1-834 H