KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:35 2014 Check: 00 .. Name: ENSTTRP00000001652/1-638 Len: 641 Check: 4625 Weight: 1.00 Name: bmy_09240T0/1-387 Len: 641 Check: 3954 Weight: 1.00 Name: ENSP00000237853/1-640 Len: 641 Check: 4614 Weight: 1.00 Name: BACU017791/1-640 Len: 641 Check: 2246 Weight: 1.00 Name: ENSBTAP00000009487/1-575 Len: 641 Check: 9975 Weight: 1.00 // 1 50 ENSTTRP00000001652/1-638 MAAGGAAGLR EEQRYGLSCG RLGQDNTTVL HVKLTETAIR ALETYQSHEX bmy_09240T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSP00000237853/1-640 MAAGGTGGLR EEQRYGLSCG RLGQDNITVL HVKLTETAIR ALETYQSHKN BACU017791/1-640 MAAGGAAGLR EEQRYGLSCG RLGQDNTTVL HVKLTETAIR ALETYQSHKN ENSBTAP00000009487/1-575 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001652/1-638 XXXXXXXXXX XXXXXLVKIP KNDPPNEVHT FNFYLSNVGK DNPQGSFDCI bmy_09240T0/1-387 ---------- ---------- ---------M LSFH------ ---------- ENSP00000237853/1-640 LIPFRPSIQF QGLHGLVKIP KNDPLNEVHN FNFYLSNVGK DNPQGSFDCI BACU017791/1-640 LIPFRPSIQF QGLQGLVKIP KNDPLNEVHT FNFYLSNVGK DNPQGSFDCI ENSBTAP00000009487/1-575 ---------- -----LVKIP KNDPLNEVHT FNFYLSNVGK DNPQGSFDCI 101 150 ENSTTRP00000001652/1-638 QQTFSSSGAS QLNCLGFIQD KITVCATNDS YQMTRERMTQ AEEESRNRST bmy_09240T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSP00000237853/1-640 QQTFSSSGAS QLNCLGFIQD KITVCATNDS YQMTRERMTQ AEEESRNRST BACU017791/1-640 QQAFSSSGAS QLNCLGFIQD KITVCATNDS YQMTRERMTQ AEEESRNRST ENSBTAP00000009487/1-575 QQTFSSSGAS QLNCLGFIQD KITVCATNDS YQMTRERMTQ AEEESRNRST 151 200 ENSTTRP00000001652/1-638 KVIKPGGPYV GKRVQIRKAP QA-SDAVPER KRSTPMNPAX XXXXXXXXXX bmy_09240T0/1-387 ---------- ---------- ---------- ---------- ---------- ENSP00000237853/1-640 KVIKPGGPYV GKRVQIRKAP QAVSDTVPER KRSTPMNPAN TIRKTHSSST BACU017791/1-640 KVIKPGGPYV GKRVQIRKAP QAVSDAVPER KRSTPMNPAN TIRKIHSSSS ENSBTAP00000009487/1-575 KVIKPGGPYV GKRVQIRKAP QAVSDAVPER KRSTPMNPAN TIRKTHGSNS 201 250 ENSTTRP00000001652/1-638 XXXXXXXXXX XXXXXXXXXX XPELLARLQK DGVNQKDKNS LGAILQQVAN bmy_09240T0/1-387 ---------- ---------- ---------- ---------- ---TMYQVAN ENSP00000237853/1-640 ISQRPYRDRV IHLLALKAYK KPELLARLQK DGVNQKDKNS LGAILQQVAN BACU017791/1-640 VSQRPYRDRV IHLLALKAYK KPELLARLQK DGVNQKDKNS LGAILQQVAN ENSBTAP00000009487/1-575 VSQRPYRDRV IHLLALKAYK KPELLARLQK DGVNQKDKNS LGAVLQQVAN 251 300 ENSTTRP00000001652/1-638 LNPKDLSYTL KDYVFKELQR DWPGYNEIDR RSLESVLSRK LNPSQNAAST bmy_09240T0/1-387 LNPKDLSYTL KDYVFKELQR DWPGYNEIDR RSLESVL--- ---------- ENSP00000237853/1-640 LNSKDLSYTL KDYVFKELQR DWPGYSEIDR RSLESVLSRK LNPSQNAAGT BACU017791/1-640 LNPKDLSYTL KDYVFKELQR DWPGYNEIDR RSLESVLSRK LNPSQNAAST ENSBTAP00000009487/1-575 LNPKDLSYTL KDYVFKELQR DWPGYNEIDR RSLESVLSRK LNPSQNAAST 301 350 ENSTTRP00000001652/1-638 SRSESPVCSS RDAASSPQXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09240T0/1-387 SSANWLICFP --CSPPSQKR LLDSDFIDPL MNKKARISHL TNRVPPTLNG ENSP00000237853/1-640 SRSESPVCSS RDAVSSPQKR LLDSEFIDPL MNKKARISHL TNRVPPTLNG BACU017791/1-640 SRSESPVCSS RDAASSPQKR LLDSDFIDPL MNKKARISHL TNRVPPTLNG ENSBTAP00000009487/1-575 SRSESPVCSS RDTASSPQKR LLDSDFIDPL MNKKARISHL TNRVPPTLNG 351 400 ENSTTRP00000001652/1-638 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXNSPS bmy_09240T0/1-387 HLNPTSEKSA AGPPLPPAAA AIPTPPPLPS THLPVSNPPQ TVNSHSNSPS ENSP00000237853/1-640 HLNPTSEKSA AGLPLPPAAA AIPTPPPLPS TYLPISHPPQ IVNSNSNSPS BACU017791/1-640 HLNPTSEKSA AGPPLPPAAA AIPTPPPLPS THLPVSNPPQ TVNSHSNSPS ENSBTAP00000009487/1-575 HLNPTSEKSA AGLPPPPAAA AIPSPPPLPS THLPVSNPPQ TVNSNSNSPS 401 450 ENSTTRP00000001652/1-638 TPEGRGTQD- PVDSFSQNGS IYEDQQDKYT SRTSLETLPP GSVLLKCPKL bmy_09240T0/1-387 TPEGRGTQDL PVDSFSQNGS IYEDQQDKYT SRTSLETLPP GSVLLKCPKP ENSP00000237853/1-640 TPEGRGTQDL PVDSFSQNDS IYEDQQDKYT SRTSLETLPP GSVLLKCPKP BACU017791/1-640 TPEGRGTQDL PVDSFSQNGS IYEDQQDKYT SRTSLETLPP GSVLLKCPKP ENSBTAP00000009487/1-575 TPEGRGTQDL PVDSFSQDGS IYEDQQDKYT SRTSLETLPP GSVLLKCPEP 451 500 ENSTTRP00000001652/1-638 MEENHS-SHK KSKKKSIRHK EKDQIKKHDI EMIEEKEEDL KREEEIAKLN bmy_09240T0/1-387 IEENHS-SHK KSKKKSKRHK EKDQIKKHDI EMIEEKEEDL KREEEIAKLN ENSP00000237853/1-640 MEENHSMSHK KSKKKSKKHK EKDQIKKHDI ETIEEKEEDL KREEEIAKLN BACU017791/1-640 IEENHS-SHK KSKKKSKRHK EKDQIKKHDI EMIEEKEEDL KREEEIAKLN ENSBTAP00000009487/1-575 MEENHS-SHK KSKKKSKKHK EKDQIKKQDV EMIEEKEEDL KREEEIAKLN 501 550 ENSTTRP00000001652/1-638 NSSPDSNEGV KEDCTASTEA SSTVELPDYL IKYIAIVSYE QRQNYKDDFN bmy_09240T0/1-387 NSSLDSNEGV KEDCTASTEA SSTIELPDYL IKYIAIVSYE QRQNYKDDFN ENSP00000237853/1-640 NSSPNSSGGV KEDCTASMEP SA-IELPDYL IKYIAIVSYE QRQNYKDDFN BACU017791/1-640 NSSPDSNEGV KEDCTASTEA SSTIELPDYL IKYIAIVSYE QRQNYKDDFN ENSBTAP00000009487/1-575 DSNPDSNEGV KEDCTASTEP SSTIELPDYL IKYIAIVSYE QRQNYKDDFN 551 600 ENSTTRP00000001652/1-638 AEYDEYRALH ARMEMVARRF IKLDAQRKRL SPGSKEYQSV HEEVLQEYQK bmy_09240T0/1-387 AEYDEYRALH ARMETVARRF IKLDXQRKRL SPGSKEYQNV HEEVLQEYQK ENSP00000237853/1-640 AEYDEYRALH ARMETVARRF IKLDAQRKRL SPGSKEYQNV HEEVLQEYQK BACU017791/1-640 AEYDEYRALH ARMETVARRF IKLDAQRKRL SPGSKEYQNV HEEVLQEYQK ENSBTAP00000009487/1-575 AEYDEYRALH ARMETVARRF IKLDAQRKRL SPGSKEYQNV HEEVLQEYQK 601 650 ENSTTRP00000001652/1-638 IKQSSPNYHE EKYRCEYLHN KLAHIKRLIG EFDQQQAESW H bmy_09240T0/1-387 IKQSSPNYHE EKYRCEYLHN KLAHIKRLIG EFDQQQAESW H ENSP00000237853/1-640 IKQSSPNYHE EKYRCEYLHN KLAHIKRLIG EFDQQQAESW S BACU017791/1-640 IKQSSPNYHE EKYRCEYLHN KLAHIKRLIG EFDQQQAESW H ENSBTAP00000009487/1-575 IKQSSPNYHE EKYRCEYLHN KLAHIKRLIG EFDQQQAESW H