KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:36 2014 Check: 00 .. Name: ENSTTRP00000000126/1-492 Len: 642 Check: 4124 Weight: 1.00 Name: BACU011032/1-636 Len: 642 Check: 6513 Weight: 1.00 Name: bmy_14794T0/1-572 Len: 642 Check: 3126 Weight: 1.00 Name: ENSP00000270357/1-494 Len: 642 Check: 8382 Weight: 1.00 Name: ENSBTAP00000009492/1-402 Len: 642 Check: 3913 Weight: 1.00 // 1 50 ENSTTRP00000000126/1-492 ---------- ---------- ---------- ---------- ---------- BACU011032/1-636 MPAELATNAA RCPAKAFRLQ IVKSARPVAE PNPGFWSQLQ KYEEALQSRV bmy_14794T0/1-572 ---------- ---------- --------MG PGLGIWGAVG CEGDSVRQAW ENSP00000270357/1-494 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009492/1-402 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000000126/1-492 ---------- ---------- ---------- ---------- ---------- BACU011032/1-636 DPFTDYGSSL TVTLPPELQA HQPFQVILRY TSTDAPAIWW LDPELTYGSA bmy_14794T0/1-572 KQ-------- ---------- ---------- -------IWW LDPELTYGSA ENSP00000270357/1-494 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009492/1-402 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000000126/1-492 ---------- ---------- ---------- ---------- --MSATQSTY BACU011032/1-636 KPFVFTQGHS VCNRSFFPCF DTPAVKCTYS AVVKAPSGVQ VLMSATQSTY bmy_14794T0/1-572 KPFVFTQGHS VCNRSFFPCF DTPAVKCTYS AVVKAPSGVQ VLMSATQSTY ENSP00000270357/1-494 ---------- ---------- ---------- ---------- --MSATRSAY ENSBTAP00000009492/1-402 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000000126/1-492 VEEEGVYRFH MEHPVPAYLV ALVAGDLQPA DIGPRSRVWA EPCLLPTATS BACU011032/1-636 VEEEGVYRFH MEHPVPAYLV ALVAGDLQPA DIGPRSRVWA EPCLLPTATS bmy_14794T0/1-572 VEEEGVYRFH MEHPVPAYLV ALVAGDLQPA DIGPRSRVWA EPCLLPTATS ENSP00000270357/1-494 MEEEGVFHFH MEHPVPAYLV ALVAGDLKPA DIGPRSRVWA EPCLLPTATS ENSBTAP00000009492/1-402 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000000126/1-492 KLSGAVEQWL SAAERLYGPY LWGRYDIVFL PPSFPIVAME NPCLTFIISS BACU011032/1-636 KLSGAVEQWL SAAERLYGPY LWGRYDIVFL PPSFPIVAME NPCLTFIISS bmy_14794T0/1-572 KLSGAVEQWL SAAERLYGPY LWGRYDIVFL PPSFPIVAME NPCLTFIISS ENSP00000270357/1-494 KLSGAVEQWL SAAERLYGPY MWGRYDIVFL PPSFPIVAME NPCLTFIISS ENSBTAP00000009492/1-402 ---------- ---------- ---RYDIVFL PPSFPIVAME NPCLTFIISS 251 300 ENSTTRP00000000126/1-492 ILESDEFLII DVIHEVAHSW FGNAVTNATW EEMWLSEGLA TYAQRRITTE BACU011032/1-636 ILESDEFLII DVIHEVAHSW FGNAVTNATW EEMWLSEGLA TYAQRRITTE bmy_14794T0/1-572 ILESDEFLII DVIHEVAHSW FGNAVTNATW EEMWLSEGLA TYAQRRITTE ENSP00000270357/1-494 ILESDEFLVI DVIHEVAHSW FGNAVTNATW EEMWLSEGLA TYAQRRITTE ENSBTAP00000009492/1-402 ILESDEFLVI DVIHEVAHSW FGNAVTNATW EEMWLSEGLA TYAQRRITTE 301 350 ENSTTRP00000000126/1-492 TYGAAFTCLE TAFRLDALHR QMKLLGEDSP VSKLQVKLEP GVNPSHLMNL BACU011032/1-636 TYGAAFTCLE TAFRLDALHR QMKLLGEDSP VSKLQVKLEP GVNPSHLMNL bmy_14794T0/1-572 TYGAAFTCLE TAFRLDALHR QMKLLGEDSP VSKLQVKLEP GVNPSHLMNL ENSP00000270357/1-494 TYGAAFTCLE TAFRLDALHR QMKLLGEDSP VSKLQVKLEP GVNPSHLMNL ENSBTAP00000009492/1-402 THGAAFTCLE TAFRLDALHR QMKLLGEDSP VSKLQVKLEP GVNPSHLMNL 351 400 ENSTTRP00000000126/1-492 FTYEKGYCFV YYLSQLCGDP QRFDRFLR-A YVEKYKFTSV VAQDLLDSFL BACU011032/1-636 FTYEKGYCFV YYLSQLCGDP QRFDSFLRQA YVEKYKFTSV VAQDLLDSFL bmy_14794T0/1-572 FTYEKGYCFV YYLSQLCGDP QRFDSFLRQA YVEKYKFTSV VAQDLLDSFL ENSP00000270357/1-494 FTYEKGYCFV YYLSQLCGDP QRFDDFLR-A YVEKYKFTSV VAQDLLDSFL ENSBTAP00000009492/1-402 FTYEKGYCFV YYLSQLCGDP QRFDDFLR-A YVEKYKFTSV VAQDLLDSFL 401 450 ENSTTRP00000000126/1-492 TFFPELKEQS VDCRAGLEFE RWLNATGPPL AEPDLSQGSS LTRPVEALFQ BACU011032/1-636 TFFPELKEQS VDCRAGLEFE RWLNATGPPL AEPDLSQGSS LTRPVEALFQ bmy_14794T0/1-572 TFFPELKEQS VDSRAGLEFE RWLNATGPPL AEPDLSQGSS LTRPVEALFQ ENSP00000270357/1-494 SFFPELKEQS VDCRAGLEFE RWLNATGPPL AEPDLSQGSS LTRPVEALFQ ENSBTAP00000009492/1-402 AFFPELKEQS VDCRAGLEFE RWLNATGPPL AEPDLSQGSS LTRPVEALFQ 451 500 ENSTTRP00000000126/1-492 LWTAEPLDQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU011032/1-636 LWTAAPLDQA AASASTIDIS KWRTFQTALF LDRLLDGSPL PQ--APWRWG bmy_14794T0/1-572 LWTAAPLDQA AASASTIDIS KWRTFQTALF LDRLLDGSPL PQEVVTSLSK ENSP00000270357/1-494 LWTAEPLDQA AASASAIDIS KWRTFQTALF LDRLLDGSPL PQEVVMSLSK ENSBTAP00000009492/1-402 LWTAEPLEQA AASASAIDIS KWRTFQTALF LDRLLDGSPL PQDVVMSLSK 501 550 ENSTTRP00000000126/1-492 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXX- --XMSRMYTI BACU011032/1-636 LYRGLQWRRQ GQWGACCGSV SAALGLAGGR GRGAANVTSG RPQMSRMYTI bmy_14794T0/1-572 CYSSLLDSMN AEIRIRWLQI VVRNDYYPDL HRVRRFLES- --QMSRMYTI ENSP00000270357/1-494 CYSSLLDSMN AEIRIRWLQI VVRNDYYPDL HRVRRFLES- --QMSRMYTI ENSBTAP00000009492/1-402 CYSSLLDSMN AEIRIRWLQI VVRNDYYPDL HRVRRFLES- --QMSRMYTI 551 600 ENSTTRP00000000126/1-492 PLYEDLCTGA LKSFALEVFY QTQGRLHPNL RRTIQQILSQ GLG----PGT BACU011032/1-636 PLYEDLCTGA LKSFALEVFY QTQGRLHPNL RRTIQQILSQ GLG----PGT bmy_14794T0/1-572 PLYEDLCTGA LKSFALEVFY QTQGRLHPNL RRTIQQILSQ GLG----PGT ENSP00000270357/1-494 PLYEDLCTGA LKSFALEVFY QTQGRLHPNL RRAIQQILSQ GLGSSTEPAS ENSBTAP00000009492/1-402 PLYEDLCTGA LKSFALEVFY QTQGRLHPNL RRTIQQILSQ GLG----PGA 601 650 ENSTTRP00000000126/1-492 EPSVEQGGAG ADSEADTDAP ALLLGDEAPG GAISLRDVNV SA BACU011032/1-636 EPSVEQGRAR ADSEADAGAP ALLLGDEAPG SAISLRDVNV SA bmy_14794T0/1-572 EPSMEQGGAG ADSEADADAP ALLLGDEAPG SAISLRDVNV SA ENSP00000270357/1-494 EPSTELGKAE ADT--DSDAQ ALLLGDEAPS SAISLRDVNV SA ENSBTAP00000009492/1-402 EP----GGAA ADSE-----P GLLLGDEAPS STISLRDVNV SA