KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:38:41 2014 Check: 00 .. Name: ENSP00000303468/1-513 Len: 530 Check: 725 Weight: 1.00 Name: ENSBTAP00000009526/1-516 Len: 530 Check: 3494 Weight: 1.00 Name: bmy_02061T0/1-258 Len: 530 Check: 774 Weight: 1.00 Name: ENSTTRP00000002792/1-513 Len: 530 Check: 7975 Weight: 1.00 // 1 50 ENSP00000303468/1-513 MAASRNGFEA VEAEGSAGCR GSSGMEVVLP LDPAVPAPLC PH--GPTLLF ENSBTAP00000009526/1-516 MATSRDRLGT LEAEGSSGRQ GYSGVEVVLS SDPATPAPLC PHELGPTLLF bmy_02061T0/1-258 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002792/1-513 MAASRERLGT VEAEGSSGRQ GNSGVEVVVS SDPAPPAPLC PH--GPTLLF 51 100 ENSP00000303468/1-513 VKVTQGKEET RRFYACSACR DRKDCNFFQW EDEKLSGARL AAREAHNRRC ENSBTAP00000009526/1-516 VKVNQGKEET RRFYACSACR DRKDCNFFQW EDEKLSGARL AAREAHNRSC bmy_02061T0/1-258 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002792/1-513 VKVNQGKEET RRFYACSACR DRKDCNFFQW EDEKLSGARL AARESHNRKC 101 150 ENSP00000303468/1-513 QPPLSRTQCV ERYLKFIELP LTQRKFCQTC QQLLLPDDWG QHSEHQVLGN ENSBTAP00000009526/1-516 QPPLSRSQCV ERYLKFIELP LSQRKFCQSC QQLLLPDDEE KHHEHQVVGD bmy_02061T0/1-258 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002792/1-513 QPPLSRSQCV ERYLKFIELP LSQRKFCQRC QQLLLPDDEE KHRKHQIVGD 151 200 ENSP00000303468/1-513 VSITQLRRPS QLLYPLENKK TNAQYLFADR SCQFLVDLLS ALGFRRVLCV ENSBTAP00000009526/1-516 VSITQLKRPS KLLYPLENKK TNAQYLFADR SCLFLVDLLS NLGFRRVLCV bmy_02061T0/1-258 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002792/1-513 ISITQLKRPS QLLYPLENKK TNAQYLFADR SCLFLVDLLS TLGFRRVLCV 201 250 ENSP00000303468/1-513 GTPRLHELIK LTASGDKKSN IKSLLLDIDF RYSQFYMEDS FCHYNMFNHH ENSBTAP00000009526/1-516 GTPRLHELIR LKESGGTKSN IRSLLLDIDF RYSQFYMEDS FCHYNMFNHH bmy_02061T0/1-258 ---------- ---------- ---------- ------MEDS FCHYNMFNHH ENSTTRP00000002792/1-513 GTPRLHELIR LKASGDKKSN IKSLLLDIDF RYSQFYMEDS FCHYNMFNHH 251 300 ENSP00000303468/1-513 FFDGKTALEV CRAFLQEDKG EGIIMVTDPP FGGLVEPLAI TFKKLIAMWK ENSBTAP00000009526/1-516 FFDGKAALEV CKTFLQEDKG EGVIMVTDPP FGGLVEPLAV TFKKLIAMWK bmy_02061T0/1-258 FFDGKAALEV CRTFLQKDEG EGVIMVTDPP FGGLVEPLAV TFKKLIAMWK ENSTTRP00000002792/1-513 FFDGKAALEV CRTFLQKDKG EGVIMVTDPP FGGLVEPLAV TFKKLIAMWK 301 350 ENSP00000303468/1-513 EGQSQDDSHK ELPIFWIFPY FFESRICQFF PSFQMLDYQ- VDYDNHALYK ENSBTAP00000009526/1-516 EGHSQDNSQK ELPIFWIFPY FFESRICQFF PSFCMLDYQV VDYDNHALYK bmy_02061T0/1-258 EGQSQ----- ---------- ---------- ---------- -DYDNHALYK ENSTTRP00000002792/1-513 EGQSQXXXXX XXXXXXXXXX XXXXXXXQFF PSFCMLDYQ- VDYDNHALYK 351 400 ENSP00000303468/1-513 HGKTGRKQSP VRIFTNIPPN KIILPTEEGY RFCSPCQRYV SLENQHCELC ENSBTAP00000009526/1-516 HGKTGRKQSP VRIFTNIPPN KIILPIEEGY RFCPLCQRYV SLENQHCEHC bmy_02061T0/1-258 HGKTGRKQSP VRIFTNIPPN KIILPIEEGY RFCPLCQRYV SLENQHCEHC ENSTTRP00000002792/1-513 HGKTGRKQSP VRIFTNIPPN KIILPIEEGY RFCPLCQRYV SLENQHCEHC 401 450 ENSP00000303468/1-513 NSCTSKDGRK WNHCFLCKKC VKPSWIHCSI CNHCAVPDHS CEGPKHGCFI ENSBTAP00000009526/1-516 NSCTSKDGRK WNHCFLCKKC VKPSWIHCSI CNHCALPDHS CKGPKDGCFI bmy_02061T0/1-258 NSCTSKDGRK WNHCFLCKKC VKPSWIHCNI CNHCALPDHS CTGPKDGCFI ENSTTRP00000002792/1-513 NSCTSKDGRK WNHCFLCKKC VKPSWIHCNI CNHCALPDHS CNGPKDGCFI 451 500 ENSP00000303468/1-513 CGELDHKRST CPNIATSKRA N--------- -----KAVRK QKQRKSNKMK ENSBTAP00000009526/1-516 CGELDHKRSA CPNISTSKKV N--------- -----KAVRK QKQRKSNKMK bmy_02061T0/1-258 CGELDHKRST CPNISTSKKV NKKNFPCLFV RSNPQKAVRK QKQRKSNKMK ENSTTRP00000002792/1-513 CGELDHKRST CPNIFTSKKV N--------- -----KAVRK RKQRKSNKMK 501 550 ENSP00000303468/1-513 METTKGQSMN HTSATRRKKR RERAHQYLGS ENSBTAP00000009526/1-516 METTKGQSMN HTSATRKKKR RERTHQYLCS bmy_02061T0/1-258 METTKGQSMN HTSVTRKKKR RERAHQYLCS ENSTTRP00000002792/1-513 METTKGQSMN HTTVTGKKKR REKAHQYLCS