KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:42 2014 Check: 00 .. Name: ENSP00000358718/1-872 Len: 876 Check: 8624 Weight: 1.00 Name: ENSBTAP00000009529/1-876 Len: 876 Check: 6000 Weight: 1.00 Name: ENSTTRP00000001786/1-873 Len: 876 Check: 1583 Weight: 1.00 Name: BACU004041/1-740 Len: 876 Check: 6956 Weight: 1.00 Name: bmy_19309T0/1-452 Len: 876 Check: 7186 Weight: 1.00 // 1 50 ENSP00000358718/1-872 MAEEKGGKQV LEESAFEEME RDFQGVLHEL SGDKSLEKFR IEYERLHAVM ENSBTAP00000009529/1-876 FEQEKTEKLV LEETAYEEIE RDFQEVLNEL SGDRSLEKFR VEYEKLHAVM ENSTTRP00000001786/1-873 MAEEKSEKLV LEETAYEEIE RDFQEVLSEL TGDKSLERFR VEYEKLHAVM BACU004041/1-740 ---------- ---------- ---------- ---------- ---------M bmy_19309T0/1-452 ---EKSEKLV LEETAYEEIE RDFQEVLSEL SGDKSLERFR VEYEKLHAVM 51 100 ENSP00000358718/1-872 KKSYDNEKRL MAKCRELNAE IVVNSAKVAT ALKLSQDDQT TIASLKKEIE ENSBTAP00000009529/1-876 KKSYDNEKRL MAKCRELNAE IVVNSAKVAT ALKLSQDDQT TIASLKKEIE ENSTTRP00000001786/1-873 KKSYDNEKRL MAKCRELNAE IVVNSAKVAT ALKLSQDDQI TITSLKKEIE BACU004041/1-740 KKSYDNEKRL MAKCRELNAE IVVNSAKVAT ALKLSQDDQT TITSLKKEIE bmy_19309T0/1-452 KKSYDNEKRL MAKCRELNAE IVVNSAKVAT ALKLSQDDQT TITSLKKEIE 101 150 ENSP00000358718/1-872 KAWKMVDSAY DKEQKAKETI LALKEEIVNL TKLVEQGSGL SMDQHSNIRD ENSBTAP00000009529/1-876 KAWKMVDSAY DKEQKAKETI LALKEEIVNL TKLVEQGSGL SMDQDSNIRD ENSTTRP00000001786/1-873 KAWKMVDSAY DKEQKAKETI LALKEEIVNL SKLVEQGSGL SMDQDSNIRD BACU004041/1-740 KAWKMVDSAY DKEQKAKETI LALKEEIVNL TKLVEQGSGL SMDQDSNIRD bmy_19309T0/1-452 KAWKMVDSAY DKEQKAKETI LALKEEIVNL TKLVEQGSGL SMDQDSNIRD 151 200 ENSP00000358718/1-872 LLRFKEEVTK ERDQLLSEVV KLRESLAQTT EQQQETERSK EEAEHAISQF ENSBTAP00000009529/1-876 LLKFKEEVTK ERDQLLSEVV KLRECLAQTI EQQQEMERSR EEAEQAIIQF ENSTTRP00000001786/1-873 LLKFKEEVTK ERDQLFSEVV KLREALAQTT EQQQEMERSR EEAEQTISQF BACU004041/1-740 LLKFKEEVTK ERDQLLSEVV KLREALAQTT EQQQEMERSR EEAELAISQF bmy_19309T0/1-452 LLKFKEEVTK ERDQLLSEVV KLREALAQTT EQQQEMERSR EEAELAISQF 201 250 ENSP00000358718/1-872 QQEIQQRQNE ASREFRKKEK LEKELKQIQA DMDSRQTEIK ALQQYVQKSK ENSBTAP00000009529/1-876 QQEIQQRQNE ASRETRKKEK LEKELRQIQM DMDSRQTEIR ALQQYVQKSK ENSTTRP00000001786/1-873 QQEIQQHQNE ALRETRKKEK LEKELKQIQT DMDTRQTEIK ALQQYVQKSK BACU004041/1-740 QQEIQQHQNE ALRETRKKEK LEKELKQMQT DMDSRQTETK ALQQYVQKSK bmy_19309T0/1-452 QQEIQQHQNE ALRETRKKEK LEKELKQMQT DMDTRQTETK GLQQYVQKSK 251 300 ENSP00000358718/1-872 EELQKLEQQL KEQKILNERA AKELEQFQMR NAKLQQENEQ HSLVCEQLSQ ENSBTAP00000009529/1-876 EELQRLEQQL KEQKILNERA AKELEQFQMR NAKLQQENEQ HSLVCEQLSQ ENSTTRP00000001786/1-873 EELQKLEQQL KEQKILNERA AKELEQFQMR NAKLQQENEQ HSLICEQLSQ BACU004041/1-740 EELQKLAQQL KEQKILNERA AKELEQFQMR NAKLQQENEQ HSLICEQLSQ bmy_19309T0/1-452 EELQKLAQQL KEQKILNERA AKELEQFQMR NAKLQQENEQ HSLICEQLSQ 301 350 ENSP00000358718/1-872 ENQQKALELK AKEEEVHQMR LDIGKLNKIR EQIHKKLHHT EDQKAEVEQH ENSBTAP00000009529/1-876 ENQQKALELK AKEEEVHQMR LDIGKLNKIR EQIHKKLHQI EDQKGEVEQH ENSTTRP00000001786/1-873 ENQQKALELK AKEEEVHQLR LEIGKLNKIR EQIHKKLHQI ESQKGEVEQH BACU004041/1-740 ENQQKALELK AKEEEVHQMR LDIGKLNKIR EQIHKKLHQV EGQKGEVEQH bmy_19309T0/1-452 ENQQKALELK AKEEEVHQMR LDIGKLNKIR EQIHKKLHQI EGQKGEVEQH 351 400 ENSP00000358718/1-872 KETLKNQIVG LER---EVEA SKKQAELDRK AMDELLRERD ILNKNMLKAV ENSBTAP00000009529/1-876 KETLKNQILG LERGDLEVEA SKKQAELDKK AMDELLRERD ILNKNMLKAV ENSTTRP00000001786/1-873 KETLKNQILG LER---EVEA SKKQAELDKK AVDELLRERD LLNKNMLKAV BACU004041/1-740 KETLKNQILG LER---EVEA SKKQAELDKK AMDELLRERD LLNKNMLKAV bmy_19309T0/1-452 KETLKNQILG LER---EVEA SKKQAELDKK AMDELLRERD LLNKNMLKAV 401 450 ENSP00000358718/1-872 NATQKQTDLV KLHEQAKRNL EGEIQNYKDE AQKQRKIIFH LEKERDRYIN ENSBTAP00000009529/1-876 SATQKQIDLV KLHEQAKRNL EEEIQNYKEE AQKQRKIIFQ LEKERDRYIN ENSTTRP00000001786/1-873 SATQKQIDLV KLHEQARRNL EEEIQNYKEE AQKQRKIIFQ LEKERDRYIS BACU004041/1-740 SATQKQIDLV KLHEQAKRNL EEEIQNYKEE AQKQRKIIFQ LEKERDRYIN bmy_19309T0/1-452 SATQKQIDLV KLHEQAKRNL EEEIQNYKEE AQKQRKIIFQ LEKERDRYIN 451 500 ENSP00000358718/1-872 QASDLTQKVL MNMEDIKVRE TQIFDYRKKI AESEIKLKQQ QNLYEAVRSD ENSBTAP00000009529/1-876 EASDLTQKVL MNMEDIKVRE MQIFDYRKKI AESETKLKQQ QNLYEAVRSD ENSTTRP00000001786/1-873 EASDLTQKVL MNMEGIKVRE MQIFDYRKKI AESETKLKQQ QNLYEVVRSD BACU004041/1-740 EASDLTQKVL MNMEGIKVRE MQIFDYRKKI AESETKLKQQ QNLYEAVRSD bmy_19309T0/1-452 EASDLTQK-- ---------- ---------- ---------- ---------- 501 550 ENSP00000358718/1-872 RNLYSKNLVE AQDEITDMKR KLKIMIHQVD ELKEDISAKE SALVKLHLEQ ENSBTAP00000009529/1-876 RNLYSKNLVE AQDEITEMKR KLKIMTHQVD QLKEEISAKE SALVKLHLEQ ENSTTRP00000001786/1-873 RNLYSKNLVE AQDEIMEMNR KLKIMTHHVD QLKEEISAKE SALAKLHLEQ BACU004041/1-740 RNLYSKNLVE AQDEITEMNR KLKIMTHQVD QLKEEISAKE SALVKLHLEQ bmy_19309T0/1-452 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000358718/1-872 QRIEKEKETL KAELQKLRQQ ALETKHFIEK QEAEERKLLR IIAEADGERL ENSBTAP00000009529/1-876 QRIEKEKETL KAELQKLRQQ ALETKHFIEK QEAEERKLLR IIAEADGERL ENSTTRP00000001786/1-873 QHIEKEKETL KAELQKLRQQ ALETKHFIEK QEAEERKLLR IIAEADGERL BACU004041/1-740 QHIEKEKETL KAELQKLRQQ ALETKHFIEK QEAEERKLLR IIAEADGERL bmy_19309T0/1-452 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000358718/1-872 RQKKELDQVI SERDILGSQL VRRNDELALL YEKIKIQQSV LNKGESQYNQ ENSBTAP00000009529/1-876 RQKKELDQVI SERDILGSQL VRRNDELALL YEKIKIQQSV LNKGESQYNQ ENSTTRP00000001786/1-873 RQKKELDQVI SERDILGSQL VRRNDELALL YEKIKIQQSV LNKGESQYNQ BACU004041/1-740 RQKKELDQVI SERDILGSQL VRRNDELALL YEKIKIQQSV LNKGESQYNQ bmy_19309T0/1-452 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000358718/1-872 RLEDMRILRL EIKKLRREKG ILARSMANVE ELRQEFFHMQ RELLKERTRC ENSBTAP00000009529/1-876 RLEDMRILKL EIKKLRREKG ILARSVANVD ELRQELFHTQ REFLKERTRC ENSTTRP00000001786/1-873 RLEDMRILKL EIKKLRWEKG ILARSVANVD ELRQELFHTQ REFLKERTRC BACU004041/1-740 RLEDMRILKL EIKKLRWEKG ILARSVANVD ELRQELFHTQ REFLKERTRC bmy_19309T0/1-452 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000358718/1-872 RALEEELENP LNVHRWRKLE ASDPNAYELI QKIHTLQKRL ISKTEEVVEK ENSBTAP00000009529/1-876 RALEEELENP MNVHRWRKLE ASDPSTFELI QKIHTLQKRL ISKTEEVVEK ENSTTRP00000001786/1-873 RALEEELENP MNVHRWRKLE ASDPSTFELI QKIHTLQKRL ISKTEEVVEK BACU004041/1-740 RALEEELENP MNVHRWRKLE ASDPSTFELI QKIHTLQKRL ISKTEEVVEK bmy_19309T0/1-452 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000358718/1-872 ELLLQEKEKL YMELKHVLAR QPGPEAAEQL KLYRRTLHDK KQQLKVLSSE ENSBTAP00000009529/1-876 ELLLQEKEKL YVELKHILAR QPGPEAAEQL QIYRHTLREK TKQLKVLSSE ENSTTRP00000001786/1-873 ELLLQEKEKL YVELKHILAR QPGPEAAEQL QIYRHTLREK TKQLKVLSSE BACU004041/1-740 ELLLQVTFPL SVLIEQVY-- ---------- --FLSTIISR TVFLELVIWQ bmy_19309T0/1-452 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000358718/1-872 LNMYEVQSKE YKYEVEKLTN ELQNLKKKYL AQKRKEQLQK NKDTAPMDNT ENSBTAP00000009529/1-876 LNMYESQSQE YKYEIEKLSN ELLNLKKKYL AQKRKEYIQK NKDRISMEDT ENSTTRP00000001786/1-873 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX NKDRIGTENA BACU004041/1-740 CCMPHF---- ---------- ---------- ---------- ---------- bmy_19309T0/1-452 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000358718/1-872 FLMVKPNGPG FTGGGFPL-R STKMTF ENSBTAP00000009529/1-876 FSMAKPSGPR FTGGGFPLSK SSKAKS ENSTTRP00000001786/1-873 FSVAKLTGPR FAGGGFPLSK SSKMKS BACU004041/1-740 ---------- ---------- ------ bmy_19309T0/1-452 ---------- ---------- ------