KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:44 2014 Check: 00 .. Name: ENSP00000271452/1-464 Len: 465 Check: 5494 Weight: 1.00 Name: ENSBTAP00000009536/1-465 Len: 465 Check: 7474 Weight: 1.00 Name: ENSTTRP00000001213/1-464 Len: 465 Check: 1941 Weight: 1.00 Name: bmy_15891T0/1-464 Len: 465 Check: 6614 Weight: 1.00 Name: BACU014431/1-360 Len: 465 Check: 5840 Weight: 1.00 // 1 50 ENSP00000271452/1-464 METLSFPRYN VAEIVIHIRN KILTGADGKN LTKNDLYPNP KPEVLHMIYM ENSBTAP00000009536/1-465 METLSFPRYN AAEVVVHIRN KILTGADGKN LSKNDLSPNP KPEVLHMIYM ENSTTRP00000001213/1-464 METLSFPRYN VAEIVVHIRN KILTGADGKN LSKNDLSPNP KPEVLHMIYM bmy_15891T0/1-464 METLSFPRYN VAEIVVHIRN KILTGADGKN LSKNDLSPNP KPEVLHMIYM BACU014431/1-360 METLSFPRYN VAEIVVHIRN KILTGADGKN LSKNDLSPNP K--------- 51 100 ENSP00000271452/1-464 RALQIVYGIR LEHFYMMPVN SEVMYPHLME GFLPFSNLVT HLDSFLPICR ENSBTAP00000009536/1-465 RALQIVYGIR LEHFYMMPVN SEVMYPHIME GFLPVSNLFI HLDSFLPICR ENSTTRP00000001213/1-464 RALQIVYGIR LEHFYMXXXX XXXXXXXXXX XXXXXXXXXX XXDSFLPICR bmy_15891T0/1-464 RALQIVYGIR LEHFYMMPVN SEVMYPHIME GFLPVSNLFI HLDSFLPICR BACU014431/1-360 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000271452/1-464 VNDFETADIL CPKAKRTSRF LSGIINFIHF REACRETYME FLWQYKSSAD ENSBTAP00000009536/1-465 VNDFEIADIL YPKAKRTTRF LSGIINFIHF REACRETYME FLWQYKSSVD ENSTTRP00000001213/1-464 VNDFEIADIL YPXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXKSSVD bmy_15891T0/1-464 VNDFEIADIL YPKAKRTSRF LSGIINFIHF REACRETYME FLWQYKSSVD BACU014431/1-360 ---------- ---------- ---------- ---------- -----KSSVD 151 200 ENSP00000271452/1-464 KMQQLNAAHQ EALMKLERLD SVPVEEQEEF KQLSDGIQEL QQSLNQDFHQ ENSBTAP00000009536/1-465 KMQQLNTAHQ EALMKLERLD SVPVEEQAEF KQLSDDIQEL QQSLNQEFRQ ENSTTRP00000001213/1-464 KMQQLNTAHQ EAIMKLERLD SVPVEEQAEF KQLSDDIQEL QQSLNQEFRQ bmy_15891T0/1-464 KMQQLNTAHQ EAIMKLERLD SVPVEEQAEF KQLSDDIQEL QQSLNQEFRQ BACU014431/1-360 KMQQLNTAHQ EAIMKLERLD SVPVEEQAEF KQLSDDIQEL QQSLNQEFRQ 201 250 ENSP00000271452/1-464 KTIVLQEGNS QKKSNISEKT KRLNELKLSV VSLKEIQESL KTKIVDSPEK ENSBTAP00000009536/1-465 KTIVLQEGNS QKKSDISEKT KRLNELKLSV VSLKEIQENL KTKIVDSPEK ENSTTRP00000001213/1-464 KTIVLQEGNS QKKSDISEKT KRLNELKLSV VSLKEVQESL KTKIVDSPEK bmy_15891T0/1-464 KTIVLQEGNS QKKSDISEKT KRLNELKLSV VSLKEVQESL KTKIVDSPEK BACU014431/1-360 KTIVLQEGNS QKKSDISEKT KRLNELKLSV VSLKEVQESL KTKIVDSPEK 251 300 ENSP00000271452/1-464 LKNYKEKMKD TVQKLKNARQ EVVEKYEIYG DSVDCLPSCQ LEVQLYQKKI ENSBTAP00000009536/1-465 VKNYKEKMKD TVQKLKNSRQ EVMEKYEIYR DSVDCLPSCQ LEVQLYQKKI ENSTTRP00000001213/1-464 LKNYKEKMKD TVQKLKNSRQ EVMEKYEIYR DSVDCLPSCQ LEVQLYQKKI bmy_15891T0/1-464 LKNYKEKMKD TVQKLKNSRQ EVMEKYEIYR DSVDCLPSCQ LEVQLYQKKI BACU014431/1-360 LKNYKEKMKD TVQKLKNSRQ EVMEKYEIYR DSVDCLPSCQ LEVQLYQKKI 301 350 ENSP00000271452/1-464 QDLSDNREKL ASILKESLNL EDQIESDESE LKKLKTEENS FKRLMIVKKE ENSBTAP00000009536/1-465 QDLADNREKL TTILKESLNL EDQIESDESE LKKLKTEENS FKRLMIAKKE ENSTTRP00000001213/1-464 QDLADNREKL TTILKESLNL EDKIESDESE LKKLKTEENS FKRLMIVKKE bmy_15891T0/1-464 QDLADNREKL TTFLKESLNL EDKIESDESE LKKLKAEENS FKRLMIVKKE BACU014431/1-360 QDLADNREKL TTFLKESLNL EDKIESDESE LKKLKAEENS FKRLMIVKKE 351 400 ENSP00000271452/1-464 KLATAQFKIN KKHEDVKQYK RTVIEDCNKV QEKRGAVYER VTTINQEIQK ENSBTAP00000009536/1-465 KLATAQFRIN KKHEDVKQYK RTVIEDCNKV QEKRGAVYER VTTINQEIQK ENSTTRP00000001213/1-464 KLATAQFRIN KKHEDVKQYK RTVIEDCNKV QEKRGAVYER VTTINQEIQK bmy_15891T0/1-464 KLATAQFRIN KKHEDVKQYK RTVIEDCNKV QEKRGAVYER VTTINQEIQK BACU014431/1-360 KLATAQFRIN KKHEDVKQYK RTVIEDCNKV QEKRGAVYER VTTINQEIQK 401 450 ENSP00000271452/1-464 IKLGIQQLKD AAEREKLKSQ EIFLNLKTAL EKYHDGIEKA AEDSYAKIDE ENSBTAP00000009536/1-465 IKFGIQQLKD AAEREKLKSQ EIFLSLKAAL EKYHEGIEKA TEDCHAKIDA ENSTTRP00000001213/1-464 IKFGIQQLKD AAEREKLKSQ EIFLSLKAAL EKYHEGIEKA TEDCHTKIDE bmy_15891T0/1-464 IKFGIQQLKD AAEREKLKSQ EIFLSLKAAL EKYHEGIEKA TEDCHTKIDE BACU014431/1-360 IKFGIQQLKD AAEREKLKSQ EIFLSLKAAL EKYHEGIEKA TEDCHTKIDE 451 500 ENSP00000271452/1-464 KTAELKRKMF KMST- ENSBTAP00000009536/1-465 KTAELKKKMF RTQPD ENSTTRP00000001213/1-464 KTAELKKKMF RIST- bmy_15891T0/1-464 KTAELKKKMF RMST- BACU014431/1-360 KTAELKKKMF RMSN-