KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:38:44 2014 Check: 00 .. Name: bmy_08080T0/1-320 Len: 320 Check: 9175 Weight: 1.00 Name: ENSP00000289407/1-283 Len: 320 Check: 9255 Weight: 1.00 Name: ENSBTAP00000009542/1-283 Len: 320 Check: 1624 Weight: 1.00 Name: ENSTTRP00000007993/1-249 Len: 320 Check: 1294 Weight: 1.00 // 1 50 bmy_08080T0/1-320 MARRPGAPAA YGEDFSFVSP LVKYLLFFFN MLFWVTHGYQ GSLISKTSEY ENSP00000289407/1-283 MARRPRAPAA SGEEFSFVSP LVKYLLFFFN MLFWVI---- -SMVM----- ENSBTAP00000009542/1-283 MARRPGAPAA YGEDFSFVSP LVKYLLFFFN MLFWVI---- -SMVM----- ENSTTRP00000007993/1-249 ---------- ---------- ---------- ----VI---- -SMVM----- 51 100 bmy_08080T0/1-320 GSFPVSTGDF HGDGCRGSLR SADEARSRHQ TQTERQPPPP EAALACLAVD ENSP00000289407/1-283 ----VAVGVY ---------- ---------- ---ARLMKHA EAALACLAVD ENSBTAP00000009542/1-283 ----VAVGVY ---------- ---------- ---ARLMKHE EAALACLAVD ENSTTRP00000007993/1-249 ----VAVGVY ---------- ---------- ---ARLMKHA EAALACLAVD 101 150 bmy_08080T0/1-320 PAILLIVVGV LMFLLTFCGC IGSLRENICL LQTFSLCLTI VFLLQLAAGV ENSP00000289407/1-283 PAILLIVVGV LMFLLTFCGC IGSLRENICL LQTFSLCLTA VFLLQLAAGI ENSBTAP00000009542/1-283 PAILLIVVGI LMFLLTFCGC IGSLRENICL LQTFSLCLTV VFLLQLAAGV ENSTTRP00000007993/1-249 PAILLIVVGI LMFLLTFCGC IGSLRENICL LQTFSLCLTI VFLLQLAAGV 151 200 bmy_08080T0/1-320 LGFVFSDKAR GKVSEIINNA IVHYRDDLDL QNLIDFGQKK FGCCGGISYK ENSP00000289407/1-283 LGFVFSDKAR GKVSEIINNA IVHYRDDLDL QNLIDFGQKK FSCCGGISYK ENSBTAP00000009542/1-283 LGFVFSDKVR GKVSEIINNA IVHYRDDLDL QNLIDFGQKE FSCCGGISYK ENSTTRP00000007993/1-249 LGFVFSDKAR GKVSEIINNA IVHYRDDLDL QNLIDFGQKK FGCCGGISYK 201 250 bmy_08080T0/1-320 DWSLNMYFNC SEDNPSRERC SVPYSCCLPT PNQAVINTMC GQGMQALDYL ENSP00000289407/1-283 DWSQNMYFNC SEDNPSRERC SVPYSCCLPT PDQAVINTMC GQGMQAFDYL ENSBTAP00000009542/1-283 DWSLNMYFNC SEDNPSRERC SVPYSCCLPT PNQAVINTMC GQGMQALDYL ENSTTRP00000007993/1-249 DWSLNMYFNC SEDNPSRERC SVPYSCCLPT PNQAVINTMC GQGMQALDYL 251 300 bmy_08080T0/1-320 EASKVIYTNG CIDRLVNWIH SNLFVLGGVA LGLAIPQLVG ILLSMILVSQ ENSP00000289407/1-283 EASKVIYTNG CIDKLVNWIH SNLFLLGGVA LGLAIPQLVG ILLSQILVNQ ENSBTAP00000009542/1-283 EASKVIYTNG CIDRLVNWIH SNLFVLGGVA LGLAIPQLVG ILLSMILVSQ ENSTTRP00000007993/1-249 EASKVIYTNG CIDRLVNWIH SNLFVLGGVA LGLAIPQLVG ILLSMILVSQ 301 350 bmy_08080T0/1-320 IKDQIKLQLY NQQHRADPWY ENSP00000289407/1-283 IKDQIKLQLY NQQHRADPWY ENSBTAP00000009542/1-283 IKDQIKLQLY NQQHRADPWY ENSTTRP00000007993/1-249 IKDQIKLQLY NQQHRADPWY