KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:45 2014 Check: 00 .. Name: ENSP00000350928/1-594 Len: 594 Check: 6112 Weight: 1.00 Name: ENSBTAP00000009547/1-594 Len: 594 Check: 6372 Weight: 1.00 Name: ENSTTRP00000004290/1-594 Len: 594 Check: 6181 Weight: 1.00 Name: bmy_10312T0/1-370 Len: 594 Check: 9325 Weight: 1.00 Name: BACU010118/1-552 Len: 594 Check: 7749 Weight: 1.00 // 1 50 ENSP00000350928/1-594 MASSTPSSSA TSSNAGADPN TTNLRPTTYD TWCGVAHGCT RKLGLKICGF ENSBTAP00000009547/1-594 MASSTPSSSA TSSNAGADPN TTNLRPTTYD TWCGVAHGCT RKLGLKICGF ENSTTRP00000004290/1-594 MASSTPSSSA TSSNAGADPN TTNLRPTTYD TWCGVAHGCT RKLGLKICGF bmy_10312T0/1-370 ---------- ---------- ---------- ---------- ---------- BACU010118/1-552 -----PASCA T--------- ---------- ---------- --------GF 51 100 ENSP00000350928/1-594 LQRTNSLEEK SRLVSAFKER QSSKNLLSCE NSDRDARFRR TETDFSNLFA ENSBTAP00000009547/1-594 LQRTNSLEEK SRLVSAFKER QSSKNLLSCE NSDKDGRFRR TETDFSNLFA ENSTTRP00000004290/1-594 LQRTNSLEEK SRLVSAFKER QSSKNLLSCE NSDRDGRFQR TETDFSNLFA bmy_10312T0/1-370 ---------- ---------- ---------- ---------- ---------- BACU010118/1-552 LQRTNSLEEK SRLVSAFKER QSSKNLLSCE NSDRDGRFQR TETDFSNLFA 101 150 ENSP00000350928/1-594 RDLLPAKNGE EQTVQFLLEV VDILLNYVRK TFDRSTKVLD FHHPHQLLEG ENSBTAP00000009547/1-594 RDLLPAKNGE EQTVQFLLEV VDILLNYVRK TFDRSTKVLD FHHPHQLLEG ENSTTRP00000004290/1-594 RDLLPAKNGE EQTVQFLLEV VDILLNYVRK TFDRSTKVLD FHHPHQLLEG bmy_10312T0/1-370 ---------- ---------- ---------- ---------- ---------- BACU010118/1-552 RDLLPAKNGE EQTVQFLLEV VDILLNYVRK TFDRSTKVLD FHHPHQLLEG 151 200 ENSP00000350928/1-594 MEGFNLELSD HPESLEQILV DCRDTLKYGV RTGHPRFFNQ LSTGLDIIGL ENSBTAP00000009547/1-594 MEGFNLELSD HPESLEQILV DCRDTLKYGV RTGHPRFFNQ LSTGLDIIGL ENSTTRP00000004290/1-594 MEGFNLELSD HPESLEQILV DCRDTLKYGV RTGHPRFFNQ LSTGLDIIGL bmy_10312T0/1-370 ---------- ---------- ---------- ---------- ---------- BACU010118/1-552 MEGFNLELSD HPESLEQILV DCRDTLKYGV RTGHPRFFNQ LSTGLDIIGL 201 250 ENSP00000350928/1-594 AGEWLTSTAN TNMFTYEIAP VFVLMEQITL KKMREIVGWS SKDGDGIFSP ENSBTAP00000009547/1-594 AGEWLTSTAN TNMFTYEIAP VFVLMEQITL KKMREIVGWS SKDGDGIFSP ENSTTRP00000004290/1-594 AGEWLTSTAN TNMFTYEIAP VFVLMEQITL KKMREIIGWS SKDGDGIFSP bmy_10312T0/1-370 ---------- ---------- ----MEQITL KKMREIVGWS SKDGDGIFSP BACU010118/1-552 AGEWLTSTAN TNMFTYEIAP VFVLMEQITL KKMREIVGWS SKDGDGIFSP 251 300 ENSP00000350928/1-594 GGAISNMYSI MAARYKYFPE VKTKGMAAVP KLVLFTSEQS HYSIKKAGAA ENSBTAP00000009547/1-594 GGAISNMYSI MAARFKYFPE VKTKGMAAVP KLVLFTSEHS HYSIKKAGAA ENSTTRP00000004290/1-594 GGAISNMYSI MAARYKYFPE VKTKGMAAVP KLVLFTSEHS HYSIKKAGAA bmy_10312T0/1-370 GGAISNMYSI MAARYKYFPE VKTKGMAAVP KLVLFTSEHS HYSIKKAGAA BACU010118/1-552 GGAISNMYSI MAARYKYFPE VKTKGMAAVP KLVLFTSEHS HYSIKKAGAA 301 350 ENSP00000350928/1-594 LGFGTDNVIL IKCNERGKII PADFEAKILE AKQKGYVPFY VNATAGTTVY ENSBTAP00000009547/1-594 LGFGTDNVIL IKCNERGKII PADLETKILE AKQKGYVPLY VNATAGTTVY ENSTTRP00000004290/1-594 LGFGTDNVIL IKCNERGKII PADLEAKILE AKQKGYIPLY VNATAGTTVY bmy_10312T0/1-370 LGFGTDNVIL IKCNERGKII PADLEAKILE AKQKGYIPLY VNATAGTTVY BACU010118/1-552 LGFGTDNVIL IKCNERGKII PADLEAKILE AKQKGYIPLY VNATAGTTVY 351 400 ENSP00000350928/1-594 GAFDPIQEIA DICEKYNLWL HVDAAWGGGL LMSRKHRHKL NGIERANSVT ENSBTAP00000009547/1-594 GAFDPIQEIA DICEKYNLWL HVDAAWGGGL LMSQKHRHKL SGIERANSVT ENSTTRP00000004290/1-594 GAFDPIQEIA DICEKYNLWL HVDAAWGGGL LMSQKHRHKL SGIERANSVT bmy_10312T0/1-370 GAFDPIQEIA DICEKYNLWL HVDAAWGGGL LMSQKHRHKL SGIERANSVT BACU010118/1-552 GAFDPIQEIA DICEKYNLWL HVDAAWGGGL LMSQKHRHKL SGIERANSVT 401 450 ENSP00000350928/1-594 WNPHKMMGVL LQCSAILVKE KGILQGCNQM CAGYLFQPDK QYDVSYDTGD ENSBTAP00000009547/1-594 WNPHKMMGVL LQCSAILVKE KGILQGCNQM CAGYLFQPDK QYDVSYDTGD ENSTTRP00000004290/1-594 WNPHKMMGVL LQCSAILVKE KGILQGCNQM CAGYLFQPDK QYDVSYDTGD bmy_10312T0/1-370 WNPHKMMGVL LQCSAILVKE KGILQGCNQM CAGYLFQPDK QYDVSYDTGD BACU010118/1-552 WNPHKMMGVL LQCSAILVKE KGILQGCNQM CAGYLFQPDK QYDVSYDTGD 451 500 ENSP00000350928/1-594 KAIQCGRHVD IFKFWLMWKA KGTVGFENQI NKCLELAEYL YAKIKNREEF ENSBTAP00000009547/1-594 KAIQCGRHVD IFKFWLMWKA KGTVGFENQI NKCLELAEYL YAKIKNREEF ENSTTRP00000004290/1-594 KAIQCGRHVD IFKFWLMWKA KGTVGFENQI NKCLELAEYL YAKIKNREEF bmy_10312T0/1-370 KAIQCGRHVD IFKFWLMWKA KGTVGFENQI NKCLELAEYL YAKIKNREEF BACU010118/1-552 KAIQCGRHVD IFKFWLMWKA KGTVGFENQI NKCLELAEYL YAKIKNREEF 501 550 ENSP00000350928/1-594 EMVFNGEPEH TNVCFWYIPQ SLRGVPDSPQ RREKLHKVAP KIKALMMESG ENSBTAP00000009547/1-594 EMVFDGEPEH TNVCFWYIPQ SLRGVPDSPE RREKLHRVAP KIKALMMESG ENSTTRP00000004290/1-594 EMVFDGEPEH TNVCFWYIPQ SLRGVLDSPE RREKLHKVAP KIKALMMESG bmy_10312T0/1-370 EMVFDGEPEH TNVCFWYIPQ SLRGLLDSPE RREKLHKVAP KIKALMMESG BACU010118/1-552 EMVFDGEPEH TNVCFWYIPQ SLRGLLDSPE RREKLHKVAP KIKALMMESG 551 600 ENSP00000350928/1-594 TTMVGYQPQG DKANFFRMVI SNPAATQSDI DFLIEEIERL GQDL ENSBTAP00000009547/1-594 TTMVGYQPQG DKANFFRMVI SNPAATQSDI DFLIEEIERL GQDL ENSTTRP00000004290/1-594 TTMVGYQPQG DKANFFRMVV SNPAATQSDI DFLIEEIERL GQDL bmy_10312T0/1-370 TTMVGYQPQG DKANFFRMVI SNPAATQSDI DFLIEEIERL GQDL BACU010118/1-552 TTMVGYQPQG DKANFFRMVI SNPAATQSDI DFLIEEIERL GQDL