KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:47 2014 Check: 00 .. Name: ENSP00000238146/1-600 Len: 871 Check: 952 Weight: 1.00 Name: ENSBTAP00000009556/1-601 Len: 871 Check: 3331 Weight: 1.00 Name: ENSTTRP00000006861/1-600 Len: 871 Check: 1474 Weight: 1.00 Name: bmy_01479T0/1-533 Len: 871 Check: 7200 Weight: 1.00 Name: BACU013658/1-870 Len: 871 Check: 8374 Weight: 1.00 // 1 50 ENSP00000238146/1-600 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009556/1-601 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006861/1-600 ---------- ---------- ---------- ---------- ---------- bmy_01479T0/1-533 ---------- ---------- ---------- ---------- ---------- BACU013658/1-870 MVTLAELLVL LAALLATASG YFVSIDAHAE ECFFERVTSG TKMGLIFEVA 51 100 ENSP00000238146/1-600 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009556/1-601 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006861/1-600 ---------- ---------- ---------- ---------- ---------- bmy_01479T0/1-533 ---------- ---------- ---------- ---------- ---------- BACU013658/1-870 EGGFLDIDVE ITGPDNKGIY KGDRESSGKY TFAAHMDGTY KFCFSNRMST 101 150 ENSP00000238146/1-600 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009556/1-601 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006861/1-600 ---------- ---------- ---------- ---------- ---------- bmy_01479T0/1-533 ---------- ---------- ---------- ---------- ---------- BACU013658/1-870 MTPKIVMFTI DIGEAPKGQD METEAHQNKL EEMINELAVA MTAVKHEQEY 151 200 ENSP00000238146/1-600 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009556/1-601 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006861/1-600 ---------- ---------- ---------- ---------- ---------- bmy_01479T0/1-533 ---------- ---------- ---------- ---------- ---------- BACU013658/1-870 MEVRERIHRA RRGVVQPPAS DWQGKCESRG KIPPAQMPAR WGKALRAQVA 201 250 ENSP00000238146/1-600 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009556/1-601 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006861/1-600 ---------- ---------- ---------- ---------- ---------- bmy_01479T0/1-533 ---------- ---------- ---------- ---------- ---------- BACU013658/1-870 ALDEWHHGRV PAARFHPPAV GFALFCGEGA FPRPPELCDW SMVPGAACWR 251 300 ENSP00000238146/1-600 ---------- ---------- MEHVTEGSWE SLPVPLHPQV LGALRELGFP ENSBTAP00000009556/1-601 ---------- ---------- MEHVTEGSWE SLPVPLHPQV LSVLRELGFP ENSTTRP00000006861/1-600 ---------- ---------- MEHVTEGSWE SLPVPLHPRV LGVLRELGFP bmy_01479T0/1-533 ---------- ---------- MEHVTEGSWE SLPVPLHPRV LGVLRELGFP BACU013658/1-870 AEAEVRPGGV GVVAAVAELA MEHVTEGSWE SLPVPLHPRV LGVLRELGFP 301 350 ENSP00000238146/1-600 YMTPVQSATI PLFMRNKDVA AEAVTGSGKT LAFVIPILEI LLRREEKLKK ENSBTAP00000009556/1-601 YMTPVQSATI PLFMKNKDVA AEAVTGSGKT LAFVIPIVEI LLRREEKFKK ENSTTRP00000006861/1-600 YMTPVQSATI PLFMKNKDVA AEAVTGSGKT LAFIIPILEI LLRREEKLKK bmy_01479T0/1-533 YMTPVQSATI PLFMKNKDVA AEAVTGSGKT LAFIIPILEI LLRRDEKLKK BACU013658/1-870 HMTPVQSATI PLFMKNKDVA AEAVTGSGKT LAFIIPILEI LLRREEKLKK 351 400 ENSP00000238146/1-600 SQVGAIIITP TRELAIQIDE VLSHFTKHFP EFSQILWIGG RNPGEDVERF ENSBTAP00000009556/1-601 SQVGAIIITP TRELAVQIEE VLSHFTKPFP QFSQILWIGG RNPGEDVARF ENSTTRP00000006861/1-600 SQVGAIIITP TRELAVQIDE VLSHFTKPFP QFSQILWIGG RNPGEDVARF bmy_01479T0/1-533 SQVGAIIITP TRELAVQIDE VLSHFTKPFP QFSQILWIGG RNPGEDVARF BACU013658/1-870 SQVGAVIITP TRELAVQIDE VLSHFTKPFP QFSQILWIGG RNPGEDVARF 401 450 ENSP00000238146/1-600 KQQGGNIIVA TPGRLEDMFR RKAEGLDLAS CVRSLDVLVL DEADRLLDMG ENSBTAP00000009556/1-601 KELGGNIIVA TPGRLEDMFR RKAEGLDLAS CVRSLEVLVL DEADRLLDMG ENSTTRP00000006861/1-600 KEHGGNIIVA TPGRLEDMFR RKAEGLDLAS CVRSLEVLVL DEADRLLDMG bmy_01479T0/1-533 KEHGGNIIVA TPGRLEDMFR RKAEGLDLAS CVRSLEVLVL DEADRLLDMG BACU013658/1-870 KEHGGNIIVA TPGRLEDMFR RKAEGLDLAS CVRSLEVLVL DEADRLLDMG 451 500 ENSP00000238146/1-600 FEASINTILE FLPKQRRTGL FSATQTQEVE NLVRAGLRNP VRVSVKEKGV ENSBTAP00000009556/1-601 FETSINTILE FLPKQRRTGL FSATQTQEVE NLVRAGLRNP VRISVKEKGV ENSTTRP00000006861/1-600 FEASINTILE FLPKQRRTGL FSATQTQEVE NLVRAGLRNP VRISVKEKGA bmy_01479T0/1-533 FEASINTILE FLPKQRRTGL FSATQTQEVE NLVRAGLRNP VRIS------ BACU013658/1-870 FEASINTILE FLPKQRRTGL FSATQTQEVE NLVRAGLRNP VRISVKEKGA 501 550 ENSP00000238146/1-600 AASSAQKTPS RLENYYMVCK ADEKFNQLVH FLRNHKQEKH LVFFSTCACV ENSBTAP00000009556/1-601 AASSTQKTPS RLENHYMVCK ADEKFNQLVH FLRNHKQEKH LVFFSTCACV ENSTTRP00000006861/1-600 AASSTQKTPS RLENYYMVCK ADEKFNQLVH FLRNHKQEKH LVFFSTCACV bmy_01479T0/1-533 ---------- -------VCK ADEKFNQLVH FLRNHKQEKH LVFF------ BACU013658/1-870 AASSTQKTPS RLENYYMVCK ADEKFNQLVH FLRNHKQEKH LVFFSTCACV 551 600 ENSP00000238146/1-600 EYYGKALEVL VKGVKIMCIH GKMKYKRNKI FMEFRKLQSG ILVCTDVMAR ENSBTAP00000009556/1-601 EYYGKALETL VKGVKIMCIH GKMKYKRNKI FMEFRKLQSG ILVCTDVMAR ENSTTRP00000006861/1-600 EYYGKALEAL VKGVKVMCIH GKMKYKRNKI FTEFRKLQSG ILVCTDVMAR bmy_01479T0/1-533 ---------- ---------- ---------- --------SG ILVCTDVMAR BACU013658/1-870 EYCGKALEAL VKGVNIMCIH GKMKYKRNKI FTEFRKLQSG ILVCTDVMAR 601 650 ENSP00000238146/1-600 GIDIPEVNWV LQYDPPSNAS AFVHRCGRTA RIGHGGSALV FLLPMEESYI ENSBTAP00000009556/1-601 GIDIPEVNWV LQYDPPSNAS AFVHRCGRTA RIGHGGSALV FLLPMEESYI ENSTTRP00000006861/1-600 GIDIPEVNWV LQYDPPSNAS AFVHRCGRTA RIGHGGSALV FLLPMEESYV bmy_01479T0/1-533 GIDIPEVNWV LQYDPPSNAS AFVHRCGRTA RIGHGGSALV FLLPMEESYV BACU013658/1-870 GIDIPEVNWV LQYDPPSNAS AFVHRCGRTA RIGHGGSALV FLLPMEESYV 651 700 ENSP00000238146/1-600 NFLAINQKCP LQEMKPQRNT ADLLPKLKSM ALADRAVFEK GMKAFVSYVQ ENSBTAP00000009556/1-601 SFLAINQKCP LQEMKLQKNT ADLLPKLKAM ALGDRAVFEK GMKAFVSYVQ ENSTTRP00000006861/1-600 SFLAINQKCP LQEMKVQKNT VDLLPKLKSM ALADRAVFEK GMKAFVSFVQ bmy_01479T0/1-533 NFLALNQKCP LQEMKVQKNT VDLLPKLKSM ALADRAVFEK GMKAFVSYVQ BACU013658/1-870 NFLALNQKCP LQEMKVQKNT VDLLPKLKSM ALADRAVFEK GMKAFVSYVQ 701 750 ENSP00000238146/1-600 AYAKHECNLI FRLKDLDFAS LARGFALLRM PKMPELRGKQ FPDFVPVDVN ENSBTAP00000009556/1-601 AYAKHECNLI FRLKDLDFAS LARGFALLRM PKMPELRGKQ FPDFVPVDVN ENSTTRP00000006861/1-600 AYAKHECNLI FRLKDLDFAS LARGFGLLRM PKMPELRGKQ FPDFVPVDVS bmy_01479T0/1-533 AYAKHECNLI FRLKDLDFAS LARGFALLRM PKMPELRGKQ FPDFVPVDVS BACU013658/1-870 AYAKHECNLI FRLKDLDFAS LARGFALLRM PKMPELRGKQ FPDFVPVDVS 751 800 ENSP00000238146/1-600 TDTIPFKDKI REKQRQK-LL EQQRREKTEN EGRRKFIKNK AWSKQKAKKE ENSBTAP00000009556/1-601 TDTIPFKDKI REKQRQKQLL EQQRKEKTEN DGRRKFIKNK AWSKQKAKKE ENSTTRP00000006861/1-600 TDTIPFKDKI REKQRQK-LL EQQRKEKTEN EGRRKFIKNK AWSKQKAKKE bmy_01479T0/1-533 TDTIPFKDKI REKQRQK-LL EQQRKEKTEN EGRRKFVKNK AWSKQKAKKE BACU013658/1-870 TDTIPFKDKI REKQRQK-LL EQQRKEKTEN EGRRKFIKNK AWSKQKAKKE 801 850 ENSP00000238146/1-600 KKKKMNEKRK REEGSDIEDE DMEELLNDTR LLKKLKKGKI TEEEFEKGLL ENSBTAP00000009556/1-601 KKKKLTEKRK REEGSDVEDE DMEELLNDTR LLKKFKKGKI TEEEFEKGLL ENSTTRP00000006861/1-600 KKKKRSEKRK REEGSDIEDE DMEELLNDTR LLKKFKKGKI TEEELEKGLL bmy_01479T0/1-533 KKKKLNEKRK RKEGSDIEDE DMEELLNDTR LLKKFKKGKI TEEEFEKGLL BACU013658/1-870 KKKKLNEKRK RKEGSDIEDE DMEELLNDTR LLKKFKKGKI TEEEFEKGLL 851 900 ENSP00000238146/1-600 TTGKRTIKTV DLGISDLEDD C ENSBTAP00000009556/1-601 TSGKRSTNKA DLEISDLEDD C ENSTTRP00000006861/1-600 TSGTGSVKTA DLGISDLEDD C bmy_01479T0/1-533 TSGKRSVKTA DLGISDLEDD C BACU013658/1-870 TSGKRSVKTA DLGISDLEDD C