KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:47 2014 Check: 00 .. Name: ENSTTRP00000006866/1-305 Len: 376 Check: 5934 Weight: 1.00 Name: BACU019289/1-301 Len: 376 Check: 3605 Weight: 1.00 Name: ENSP00000416250/1-305 Len: 376 Check: 3739 Weight: 1.00 Name: bmy_01480T0/1-335 Len: 376 Check: 9923 Weight: 1.00 Name: ENSBTAP00000009560/1-305 Len: 376 Check: 6989 Weight: 1.00 // 1 50 ENSTTRP00000006866/1-305 ---------- ---------- ---------- ---------- -----MDDKE BACU019289/1-301 ---------- ---------- ---------- ---------- ---------E ENSP00000416250/1-305 ---------- ---------- ---------- ---------- -----MDDKE bmy_01480T0/1-335 RRRKWSAESC RTLSVAVVRS PRGRWTHPSG ASGSGPLGLR GPEGTMDDKE ENSBTAP00000009560/1-305 ---------- ---------- ---------- ---------- -----MDNTE 51 100 ENSTTRP00000006866/1-305 LIEYFKSQMK EDPDMASAVA AIRTLLEYLR RDKGETLQGL RANLTSAIET BACU019289/1-301 LIEYFKSQVK EDPDMASAVA AIRTLLEYMR RDKGETLQGL VANLTSAIET ENSP00000416250/1-305 LIEYFKSQMK EDPDMASAVA AIRTLLEFLK RDKGETIQGL RANLTSAIET bmy_01480T0/1-335 LIEYFKSQVK EDPDMASAVA AIRTLLEYLR KDKGETLQGL RANLTSAIET ENSBTAP00000009560/1-305 LIEYFKSQIK EDPDMASAVA AIRTLLEYLR RDTGETIQGL RANLTSAIET 101 150 ENSTTRP00000006866/1-305 LCGVDSSVAV SSGGELFLRF ISLTSLEYSD YSKCKKIMIE RGEIFLRRTS BACU019289/1-301 LCGVDSSVAV SSGGELFLRF ITLTSLEYSD YSKCKKIMIE RGEIFLRRTS ENSP00000416250/1-305 LCGVDSSVAV SSGGELFLRF ISLASLEYSD YSKCKKIMIE RGELFLRRIS bmy_01480T0/1-335 LCGVDSSVAV SSGGELFLRF ISLTSLEYS- ---------- ---------- ENSBTAP00000009560/1-305 LCGVDSSVAV SSGGELFLRF ISLTSLEYSD YSKCKKIMIE RGEIFLRRIS 151 200 ENSTTRP00000006866/1-305 LSRNKIADLC HTFIKDGARI LTHAYSRVVL RVLEAAVAAK KRFSVYITES BACU019289/1-301 LSRNKIADLC HTFIKDGVRI LTHAYSRVVL RVLEAAVAAK KRFSVYITES ENSP00000416250/1-305 LSRNKIADLC HTFIKDGATI LTHAYSRVVL RVLEAAVAAK KRFSVYVTES bmy_01480T0/1-335 ---------- --------RI LTHAYSRVVL RVLEAAVAAK KRFSVYITES ENSBTAP00000009560/1-305 LSRNKIADLC HTFIKDGARI LTHAYSRVVL RVLEAAVAAK KRFSVYITES 201 250 ENSTTRP00000006866/1-305 QPDLSG---- ---------- --------XX XXXXXXXXXX XXXXXXXXX- BACU019289/1-301 QPDLSG---- ---------- ---------- --QVSFHLVM SPAVLLKSKL ENSP00000416250/1-305 QPDLSG---- ---------- --------KK MAKALCHLNV PVTVVLDAA- bmy_01480T0/1-335 QPDLSGQSAL PLTVPVPAPG RKITVNLNKK MAKALCHLSV PVTVVLDAA- ENSBTAP00000009560/1-305 QPDLSG---- ---------- --------KK MAKALCHLNV PVTVVLDAA- 251 300 ENSTTRP00000006866/1-305 -XXYIMEKVD LVIVGAEGVV ENGGIINKIG TNQMAVCAKA RNKPFYVVAE BACU019289/1-301 RIRYIMEKVD LVIVGAEGVV ENGGIINKIG TNQMAVCAKA QNKPFYVVAE ENSP00000416250/1-305 -VGYIMEKAD LVIVGAEGVV ENGGIINKIG TNQMAVCAKA QNKPFYVVAE bmy_01480T0/1-335 -VGYIMEKVD LVIVGAEGVV ENGGIINKIG TNQMAVCAKA QNKPFYVVAE ENSBTAP00000009560/1-305 -VGYIMEKVD LVIVGAEGVV ENGGIINKIG TNQMAVCAKA QNKPFYVVAE 301 350 ENSTTRP00000006866/1-305 SFKFVRLFPL NQQDVPDKFK --YKADTLKS TQTGQDLKEE HPWVDYTSPS BACU019289/1-301 SFKFVRLFPL NQQDVPDKFK ARYKADTLKS TQTGQDLKEE HPWVDYTSPS ENSP00000416250/1-305 SFKFVRLFPL NQQDVPDKFK --YKADTLKV AQTGQDLKEE HPWVDYTAPS bmy_01480T0/1-335 SFKFVRLFPL NQQDVPDKFK ARYKADTLKS TQTGQDLKEE HPWVDYTSPS ENSBTAP00000009560/1-305 SFKFVRLFPL NQQDVPDKFK --YKADTLKS VQTGQDLREE HPWVDYTSPS 351 400 ENSTTRP00000006866/1-305 LITLLFTDLG VLTPSAVSDE LIKLYL BACU019289/1-301 LITLLFTDLG VLTPSAVSDE LIKLYL ENSP00000416250/1-305 LITLLFTDLG VLTPSAVSDE LIKLYL bmy_01480T0/1-335 LITLLFTDLG VLTPSAVSDE LIKLYL ENSBTAP00000009560/1-305 LITLLFTDLG VLTPSAVSDE LIKLYL