KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:38:49 2014 Check: 00 .. Name: ENSP00000332247/1-856 Len: 907 Check: 9525 Weight: 1.00 Name: ENSBTAP00000009563/1-854 Len: 907 Check: 7366 Weight: 1.00 Name: bmy_01483T0/1-905 Len: 907 Check: 7286 Weight: 1.00 Name: ENSTTRP00000015706/1-815 Len: 907 Check: 9289 Weight: 1.00 // 1 50 ENSP00000332247/1-856 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009563/1-854 ---------- ---------- ---------- ---------- ---------- bmy_01483T0/1-905 QLVQPGVLWC GAAARPQEKP ELRAAPADRA GPRGPEPPPP VGPRGGAGRP ENSTTRP00000015706/1-815 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000332247/1-856 -MGSLFRSET MCLAQLFLQS GTAYECLSAL GEKGLVQFRD LNQNVSSFQR ENSBTAP00000009563/1-854 -MGSLFRSET MCLAQLFLQS GTAYECLSVL GEKGLVEFRD LNQNVSSFQR bmy_01483T0/1-905 AMGSLFRSET MCLAQLFLQS GTAYECLSAL GEKGLVQFRD LNQNVSSFQR ENSTTRP00000015706/1-815 ---------- ---------- ---------- ---------- LNQNVSSFQR 101 150 ENSP00000332247/1-856 KFVGEVKRCE ELERILVYLV QEINRADIPL PEGEASPPAP PLKQVLEMQE ENSBTAP00000009563/1-854 KFVGEVKRCE ELERILAYLV QEINRADIPL PEGDTSPPAP PLKQVLEMQE bmy_01483T0/1-905 KFVGEVKRCE ELERILAYLV QEINRADIPL PEGETSPPAP PLKQVLEMQE ENSTTRP00000015706/1-815 KFVGEVKRCE ELERILAYLV QEINRADIPL PEGETSPPAP PLKQVLEMQE 151 200 ENSP00000332247/1-856 QLQKLEVELR EVTKNKEKLR KNLLELIEYT HMLRVTKTFV KRNVEFEPTY ENSBTAP00000009563/1-854 QLQKLEVELR EVTKNKEKLR KNLLELIEYT HMLRVTKTFV KRNVEFEPTY bmy_01483T0/1-905 QLQKLEAELR EVTKNKEKLR RNLLELTEYT HMLRVTKTFV KRSLEFEPTY ENSTTRP00000015706/1-815 QLQKLEAELR EVTKNKERLR KNLLELTEYT HVLRVSKAFV RRDMQFEPTY 201 250 ENSP00000332247/1-856 EEFPSLESDS LLDYSCMQRL GAKLGFVSGL INQGKVEAFE KMLWRVCKGY ENSBTAP00000009563/1-854 EEFPPLENES LLDYSCMQRL GAKLGFVSGL INQGKVEAFE KMLWRVCKGY bmy_01483T0/1-905 EEFPPLENDS LLDYSCMQRL GAKLGFVSGL INQGKAEAFG KTLWRACRGH ENSTTRP00000015706/1-815 EEFPSLENDS LLDYSCMQRL GAKLGFVSGL INQGKAEAFG KTLWRACRGH 251 300 ENSP00000332247/1-856 TIVSYAELDE SLEDPETGEV IKWYVFLISF WGEQIGHKVK KICDCYHCHV ENSBTAP00000009563/1-854 TIVTYAELDE PLEDPETGEV IKWYVFLISF WGEQIGHKVK KICDCYHCHV bmy_01483T0/1-905 SIVTHAELEG PLEDPETGEV IKWYVFLISF WGEQIGHKVK KICDCYHCHV ENSTTRP00000015706/1-815 SIVTHAELEG PLEDPETGEV IKWYVFLISF WGEQIGHKVK KICDCYHCHV 301 350 ENSP00000332247/1-856 YPYPNTAEER REIQEGLNTR IQDLYTVLHK TEDYLRQVLC KAAESVYSRV ENSBTAP00000009563/1-854 YPYPNTAEER REIQEGLNTR IQDLYTVLHK TEDYLRQVLC KAAESVYSRV bmy_01483T0/1-905 YPYPNTAEER REIQEGLNTR IQDLYTVLHK TEDYLRQVLC KAAESVYSRV ENSTTRP00000015706/1-815 YPYPNTAEER REIQEGLNTR IQDLYTVLHK TEDYLRQVLC KAAESVYSRV 351 400 ENSP00000332247/1-856 IQVKKMKAIY HMLNMCSFDV TNKCLIAEVW CPEADLQDLR RALEEGSRES ENSBTAP00000009563/1-854 IQVKKMKAIY HMLNMCSFDV TNKCLIAEVW CPEADLHELR RALEEGSRES bmy_01483T0/1-905 IQVKKMKAIY HMLNMCSFDV TNKCLIAEVW CPEADLHELR LALEEGSRES ENSTTRP00000015706/1-815 IQVKKMKAIY HMLNMCSFDV TNKCLIAEVW CPEADLHELR LALEEGSRQS 401 450 ENSP00000332247/1-856 GATIPSFMNI IPTKETPPTR IRTNKFTEGF QNIVDAYGVG SYREVNPALF ENSBTAP00000009563/1-854 GGTIPSFMNT IPTKETPPTL IRTNKFTEGF QNIVDAYGVG SYQEVNPALF bmy_01483T0/1-905 GATIPSFMNT IPTKETPPTL IRTNKFTEGF QNIVDAYGVG SYREVNPALF ENSTTRP00000015706/1-815 GASIPSFMNT IPTKETPPTL IRTNKFTEGF QNIVDAYGVG SYREVNPALF 451 500 ENSP00000332247/1-856 TIITFPFLFA VMFGDFGHGF VMFLFALLLV LNENHPRLNQ SQEIMRMFFN ENSBTAP00000009563/1-854 TIITFPFLFA VMFGDFGHGF VMFLFALLLV LNENHPRLNQ SQEIMRMFFN bmy_01483T0/1-905 TIITFPFLFA VMFGDLGHGF VMFLFALLLV LNEDHPRLSQ SQEIMRMVFN ENSTTRP00000015706/1-815 TIITFPFLFA VMFGDLGHGF VMFLFALLLV LNEDHPRLSQ SQEIVRMFFN 501 550 ENSP00000332247/1-856 GRYILLLMGL FSVYTGLIYN DCFSKSVNLF GSGWNVSAMY SSSHPPAEHK ENSBTAP00000009563/1-854 GRYILLLMGL FSVYTGLIYN DCFSKSVNLF GSRWNVSAMY SSSHSPEEQR bmy_01483T0/1-905 GRYILLLMGL FSVYTGLVYN DCFSKSVSLF GSGWNVSAMY SSSHSPAEQR ENSTTRP00000015706/1-815 GRYILLLMGL FSVYTGLIYN DCFSKSLNLF GSGWNVSAMY SSGHSPAEQR 551 600 ENSP00000332247/1-856 KMVLWNDSVV RHNSILQLDP SIPGVFRGPY PLGIDPIWNL ATNRLTFLNS ENSBTAP00000009563/1-854 KMVLWNDSIV RHHSVLQLDP SVPGVFRGPY PFGIDPIWNL ATNRLTFLNS bmy_01483T0/1-905 KMVLWNDSVI RHSRALQLDP SVPGVFRGPY PLGIDPIWNL ATNRLTFLNS ENSTTRP00000015706/1-815 KMMLWNDSVI RHNRVLQLDP SVPGVFRGPY PLGIDPIWNL ATNRLTFLNS 601 650 ENSP00000332247/1-856 FKMKMSVILG IIHMTFGVIL GIFNHLHFRK KFNIYLVSIP ELLFMLCIFG ENSBTAP00000009563/1-854 FKMKMSVILG ITHMTFGVIL GIFNHLHFRK KFNICLVSIP ELLFMLCIFG bmy_01483T0/1-905 FKMKMSVIFG IIHMTFGVIL GIFNHLHFRK KFNIYLVSIP ELLFMLCIFG ENSTTRP00000015706/1-815 FKMKMSVILG IIHMTFGVIL GIFNHLHFRK KFNIYLVSIP ELLFMLCIFG 651 700 ENSP00000332247/1-856 YLIFMIFYKW LVFSAETSRV APSILIEFIN MFLFPASKTS GLYTGQEYVQ ENSBTAP00000009563/1-854 YLIFMIIYKW LVYSAETSRT APSILIEFIS MFLFLASDTG GLYPGQEHVQ bmy_01483T0/1-905 YLIFMIFYKW LVYSAETSRV APSILIEFIN MFLFPASDTG GLYPGQEHVQ ENSTTRP00000015706/1-815 YLVFMIFYKW LVYSAETSRV APSILIEFIN MFLFPASDTG GLYPGQEHVQ 701 750 ENSP00000332247/1-856 RVLLVVTALS VPVLFLGKPL FLLWLHNGRS CFGVNRSGYT LIRKDSEEEV ENSBTAP00000009563/1-854 RLLLLITVLS VPVLFLGKPL FLLWLHRGRS CFGVGRSGYT LVRKDSEEEV bmy_01483T0/1-905 RLLLVITALS VPVLFLGKPL FLLWLHHGRS CFGVSRSGYT LVRKDSEEEV ENSTTRP00000015706/1-815 RLLLVITALS VPVLFLGKPL FLLWLHRGRS CFGVSRSGYT LVRKDSEEEV 751 800 ENSP00000332247/1-856 SLLGSQDIEE GNHQVEDGCR EMACEEFNFG EILMTQVIHS IEYCLGCISN ENSBTAP00000009563/1-854 SLLGGQDIEE GNNQMEDGCR EVTCEEFDFG EILMTQIIHS IEYCLGCISN bmy_01483T0/1-905 SLLGSQDIEE GNNQMEDGCR EVTCEEFNFG EILMTQVIHS IEYCLGCISN ENSTTRP00000015706/1-815 SLLGSQDIEE GNNQMEDGCR EVTCEEFNFG EILMTQVIHS IEYCLGCISN 801 850 ENSP00000332247/1-856 TASYLRLWAL SLAHAQLSDV LWAMLMRVGL RVDTTYGVLL LLPVIALFAV ENSBTAP00000009563/1-854 TASYLRLWAL SLAHAQLSEV LWAMLMHVGL RVDTAYGVLV LLPVIAFFAV bmy_01483T0/1-905 TASYLRLWAL SLAHAQLSDV LWAMLMRVGL RVDTTYGVLL LLPVIALFAV ENSTTRP00000015706/1-815 TASYLRLWAL SLAHAQLSDV LWAMLMRVGL RVDTTYGVLL LLPVIALFAV 851 900 ENSP00000332247/1-856 LTIFILLIME GLSAFLHAIR LHWVEFQNKF YVGAGTKFVP FSFSLLSSKF ENSBTAP00000009563/1-854 LTIFILLIME GLSAFLHAIR LHWVEFQNKF YVGAGTKFVP FSFRLLSSKF bmy_01483T0/1-905 LTIFILLIME GLSAFLHAIR LHWVEFQNKF YVGAGTKFVP FSLRLLSSKF ENSTTRP00000015706/1-815 LTIFILLIME GLSAFLHAIR LHWVEFQNKF YVGAGTKFVP FSLRLLSSKF 901 950 ENSP00000332247/1-856 NNDDSVA ENSBTAP00000009563/1-854 SDD--LA bmy_01483T0/1-905 NDD--MA ENSTTRP00000015706/1-815 SDD--MA