KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:38:50 2014  Check: 00 ..

 Name: ENSP00000362205/1-230     Len:    252  Check:  2963  Weight:  1.00
 Name: bmy_11332T0/1-249         Len:    252  Check:  404  Weight:  1.00
 Name: ENSTTRP00000002351/1-168  Len:    252  Check:  7523  Weight:  1.00
 Name: ENSBTAP00000009568/1-230  Len:    252  Check:  6608  Weight:  1.00

//


                          1                                                   50
ENSP00000362205/1-230     --------ME PLRLLILLFV TELSGAHNTT ---------- ----VFQGVA 
bmy_11332T0/1-249         AAPDE---PD PLLSAVQGKD EILHKAPCVC PPQEKGDMEP LGLLILLFVT 
ENSTTRP00000002351/1-168  VLHKGXXXXX XXXXXXXXXX XXLSRAHNTT ---------- ----VFQGMA 
ENSBTAP00000009568/1-230  --------ME PVVLLILLAV TELSRAHNTT ---------- ----VFQGMM 


                          51                                                 100
ENSP00000362205/1-230     GQSLQVSCPY DSMKHWGRRK AWCRQLGEKG PCQRVVSTHN LWLLSFLRRW 
bmy_11332T0/1-249         GRSLRVSCPY NFLKHWGRRK AWCRQLGEEG LCQQVVSTHP SWLLSFLKRR 
ENSTTRP00000002351/1-168  GRSLRVSCPY NSLKHWGRRK AWCRQLGEEG LCQQVVSTHP SWLLSFLKRH 
ENSBTAP00000009568/1-230  GRSLRVSCPY NSLKHWGRRK AWCRQLGEEG LCQQVVSTHP SWLLSFLKRR 


                          101                                                150
ENSP00000362205/1-230     NGSTAITDDT LGGTLTITLR NLQPHDAGLY QCQSLHGSEA DTLRKVLVEV 
bmy_11332T0/1-249         NGSTAIMDDA LGGTLTITLR NLQAHDAGLY QCQSLHGSEA DTLRKVLVEV 
ENSTTRP00000002351/1-168  NGSTAITDDA LGGTLTITLR NLQAHDAGLY QCQSLHGSEA DTLRKVLVEV 
ENSBTAP00000009568/1-230  NGSTAITDDA LGGTLTITLR NLQTHDAGLY QCQSLHGSEA DTLRKVLVEV 


                          151                                                200
ENSP00000362205/1-230     LADPLDHRDA GDLWFPGESE SFEDAHVEHS ISRSLLEGEI PFPPTSILLL 
bmy_11332T0/1-249         LADPLDYQXP GDLWIPEESK SFEDAHVEHS ISRNLSDEES PFPPISILFL 
ENSTTRP00000002351/1-168  LADPLDYQDP GDLWIPEESE RFEDAQVEHS IS-------- ---------- 
ENSBTAP00000009568/1-230  LADPRDYQDP GDLWIPEGSE SFENAQVEHS ISRSLSEEES PFPPTSILFL 


                          201                                                250
ENSP00000362205/1-230     LACIFLIKIL AASALWAAAW HGQKPGTHPP SELDCGHDPG YQLQTLPGLR 
bmy_11332T0/1-249         LACIFLSKLL AASALWAAAW HGQKRRTPHA SGLDCGHDPG YQLQTVTELR 
ENSTTRP00000002351/1-168  ---------- ---------- ---------- ---------- ---------- 
ENSBTAP00000009568/1-230  LACIFLSKLL AASALWAAAW HGQKQRPPQA SGPDCGHNPG YQLQTLTELR 


                          251                                                300
ENSP00000362205/1-230     DT 
bmy_11332T0/1-249         DT 
ENSTTRP00000002351/1-168  -- 
ENSBTAP00000009568/1-230  DV