KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:52 2014 Check: 00 .. Name: ENSTTRP00000005379/1-497 Len: 502 Check: 1899 Weight: 1.00 Name: ENSP00000357907/1-502 Len: 502 Check: 1851 Weight: 1.00 Name: BACU014218/1-294 Len: 502 Check: 2508 Weight: 1.00 Name: bmy_20649T0/1-365 Len: 502 Check: 684 Weight: 1.00 Name: ENSBTAP00000009583/1-434 Len: 502 Check: 5279 Weight: 1.00 // 1 50 ENSTTRP00000005379/1-497 MDYDSKAKL- AERERVEDLF EYEGCKVGRG -YGHVYKARR KDGKDEKEYA ENSP00000357907/1-502 MDYDFKAKLA AERERVEDLF EYEGCKVGRG TYGHVYKARR KDGKDEKEYA BACU014218/1-294 ---------- ---------- ---------- ---------- ---------- bmy_20649T0/1-365 ---------- ---------- ---------- ---------- --------MS ENSBTAP00000009583/1-434 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000005379/1-497 LKQIEGTGIS MSACREIALL RELKHPNVIA LQKVFLSHSD RKVWLLFDYA ENSP00000357907/1-502 LKQIEGTGIS MSACREIALL RELKHPNVIA LQKVFLSHSD RKVWLLFDYA BACU014218/1-294 ---------- ---------- ---------- ---------- ---------- bmy_20649T0/1-365 GSKCKSSGDE AGTAVLFKLL RELKHPNVIA LQKVFLSHSD RKVWLLFDYA ENSBTAP00000009583/1-434 ---------- ------LQLL RELKHPNVIA LQKVFLSHSD RKVWLLFDYA 101 150 ENSTTRP00000005379/1-497 EHDLWHIIKF HRASKANKKP MQLPRSMVKS LLYQILDGIH YLHANWVLHR ENSP00000357907/1-502 EHDLWHIIKF HRASKANKKP MQLPRSMVKS LLYQILDGIH YLHANWVLHR BACU014218/1-294 ---------- ---------- MQLPRSMVKS LLYQILDGIH YLHANWVLHR bmy_20649T0/1-365 EHDLWHIIKF HRASKANKKP MQLPRSMVKS LLYQILDGIH YLHANWVLHR ENSBTAP00000009583/1-434 EHDLWHIIKF HRASKANKKP MQLPRSMVKS LLYQILDGIH YLHANWVLHR 151 200 ENSTTRP00000005379/1-497 DLKPANILVM GEGPERGRVK IADMGFARLF NSPLKPLADL DPVVVTFWYR ENSP00000357907/1-502 DLKPANILVM GEGPERGRVK IADMGFARLF NSPLKPLADL DPVVVTFWYR BACU014218/1-294 DLKPANILVM GEGPERGRVK IADMGFARLF NSPLKPLADL DPVVVTFWYR bmy_20649T0/1-365 DLKPANILVM GEGPERGRVK IADMGFARLF NSPLKPLADL DPVVVTFWYR ENSBTAP00000009583/1-434 DLKPANILVM GEGPERGRVK IADMGFARLF NSPLKPLADL DPVVVTFWYR 201 250 ENSTTRP00000005379/1-497 APELLLGARH YTKAIDIWAI GCIFAELLTS EPIFHCRQED IKTSNPFHHD ENSP00000357907/1-502 APELLLGARH YTKAIDIWAI GCIFAELLTS EPIFHCRQED IKTSNPFHHD BACU014218/1-294 APELLLGARH YTKAI----- ---------- ---------- ---------- bmy_20649T0/1-365 APELLLGARH YTKAIDIWAI GCIFAELLTS EPIFHCRQED IKTSNPFHHD ENSBTAP00000009583/1-434 APELLLGARH YTKAIDIWAI GCIFAELLTS EPIFHCRQED IKTSNPFHHD 251 300 ENSTTRP00000005379/1-497 QLDRIFSVMG FPADKDWEDI RKMPEYPTLQ KDFRRTTYAN SSLIKYMEKH ENSP00000357907/1-502 QLDRIFSVMG FPADKDWEDI RKMPEYPTLQ KDFRRTTYAN SSLIKYMEKH BACU014218/1-294 ---------- ---DKDWEDI RKMPEYPTLQ KDFRRTTYAN SSLIKYMEKH bmy_20649T0/1-365 QLDRIFSVMG FPADKDWEDI RKMPEYPTLQ KDFRRTTYAN SSLIKYMEKH ENSBTAP00000009583/1-434 QLDRIFSVMG FPADKDWEDI RKMPEYPTLQ KDFRRTTYAN SSLIKYMEKH 301 350 ENSTTRP00000005379/1-497 KVKPDSKVFL LLQKLLTMDP TKRITSEQAL QDPYFQEDPL PTLXXXXXXX ENSP00000357907/1-502 KVKPDSKVFL LLQKLLTMDP TKRITSEQAL QDPYFQEDPL PTLDVFAGCQ BACU014218/1-294 KVKPDSKVFL LLQKLLTMDP TKRITSEQAL QDPYFQEDPL PTLDVFAGCQ bmy_20649T0/1-365 KVKPDSKVFL LLQKLLTMDP TKRITSEQAL QDPYFQEDPL PTLDVFAGCQ ENSBTAP00000009583/1-434 KVKPDSKVFL LLQKLLTMDP TKRITSEQAL QDPYFQEDPL PTLDVFAGCQ 351 400 ENSTTRP00000005379/1-497 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XPAA--QQAA APPQAAPQQQ ENSP00000357907/1-502 IPYPKREFLN EDDPEEKGDK NQQQQQNQHQ QPTAPPQQAA APPQAPPPQQ BACU014218/1-294 IPYPKREFLN EDEPEEKGDK NQQQQQNQHP QPAAPPQQAA APPQAAPQQQ bmy_20649T0/1-365 IPYPKREFLN EDEPEEKGDK ---------- ---------- ---------- ENSBTAP00000009583/1-434 IPYPKREFLN EDEPEEKGDK NQQQQQNQHQ QPTAPPQQAA APPQAPPQQQ 401 450 ENSTTRP00000005379/1-497 NSTQANGTAG GAGAGPGAAG AGLQHSQDSG -NQVPPNKKP RLGPSGTNSG ENSP00000357907/1-502 NSTQTNGTAG GAGAGVGGTG AGLQHSQDSS LNQVPPNKKP RLGPSGANSG BACU014218/1-294 NSTQANGTAG GAGAGPGAAG AGLQHSQDSG LNQVPPNKKP RLGPSGTNSG bmy_20649T0/1-365 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009583/1-434 NSTQTNGTAG GAGAGP--AG AGLQHSQDSG LNQVPPNKKP RLGPSGTNSG 451 500 ENSTTRP00000005379/1-497 GPVMPSDYQH SSSRLNYQSS VQGSSQSQSS LGYSSSSQQS AQYHPSHQAH ENSP00000357907/1-502 GPVMPSDYQH SSSRLNYQSS VQGSSQSQST LGYSSSSQQS SQYHPSHQAH BACU014218/1-294 GPVMPSDY-- ---------- ---------- ---------- -QVLP----- bmy_20649T0/1-365 ---------H SSSRLNYQSS VQGSSQSQSS LGYSSSSQQS AQYHPSHQAH ENSBTAP00000009583/1-434 GPVMPSDYQH SSSRLNYQSS VQGSSQSQST LGYSSSSQQS AQYHPSHQAH 501 550 ENSTTRP00000005379/1-497 RY ENSP00000357907/1-502 RY BACU014218/1-294 -- bmy_20649T0/1-365 RY ENSBTAP00000009583/1-434 RY