KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:53 2014 Check: 00 .. Name: BACU017912/1-507 Len: 758 Check: 8287 Weight: 1.00 Name: ENSTTRP00000007556/1-514 Len: 758 Check: 3840 Weight: 1.00 Name: bmy_11969T0/1-411 Len: 758 Check: 4994 Weight: 1.00 Name: ENSP00000378505/1-638 Len: 758 Check: 4062 Weight: 1.00 Name: ENSBTAP00000009609/1-490 Len: 758 Check: 1616 Weight: 1.00 // 1 50 BACU017912/1-507 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007556/1-514 ---------- ---------- ---------- ---------- ---------- bmy_11969T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSP00000378505/1-638 MPVLSARRRE LADHAGSGRR SGPSPTARSG PHLSALRAQP ARAAHLSGRG ENSBTAP00000009609/1-490 ---------- ---------- ---------- ---------- ---------- 51 100 BACU017912/1-507 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007556/1-514 ---------- ---------- ---------- ---------- ---------- bmy_11969T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSP00000378505/1-638 TYVRRDTAGG GPGQARPLGP PGTSLLGRGA RRSGEGWCPG AFESGARAAR ENSBTAP00000009609/1-490 ---------- ---------- ---------- ---------- ---------- 101 150 BACU017912/1-507 ---------- ---------- ---------- ---------- --------MH ENSTTRP00000007556/1-514 ---------- ---------- ---------- ---------- ---------- bmy_11969T0/1-411 ---------- ---------- ---------- ---------- --------MR ENSP00000378505/1-638 PPSRVEPRLA TAASREGAGL PRAEVAAGSG RGARSGEWGL AAAGAWETMH ENSBTAP00000009609/1-490 ---------- ---------- ---------- ---------- --------MH 151 200 BACU017912/1-507 HCKRYRSPEP DPYLSYRWKR RRSYSREHEG RLRYPSRREP PPRRSRSRSH ENSTTRP00000007556/1-514 ---------- ---------- ---------- ---------- ---------H bmy_11969T0/1-411 LVG------- -------WR- ---------- ---------- ---------- ENSP00000378505/1-638 HCKRYRSPEP DPYLSYRWKR RRSYSREHEG RLRYPSRREP PPRRSRSRSH ENSBTAP00000009609/1-490 HCKRYRSPEP DPYLSYRWKR RRSYSREHEG RLRYPSRREP PPRRSRSRSH 201 250 BACU017912/1-507 DRLPYQRRYR EHHDSDTYRC EERSPSFGED YYGSSRCHHR RRSREREPYR ENSTTRP00000007556/1-514 DRLPYQRRYR EHRDSDTYRC EERSPSFGED YYGSSRCHHR RRSREREPYR bmy_11969T0/1-411 ---------- ---------- ------FG-- ----GRCMQ- ---------- ENSP00000378505/1-638 DRLPYQRRYR ERRDSDTYRC EERSPSFGED YYGPSRSRHR RRSRERGPYR ENSBTAP00000009609/1-490 DRLPYQRRYR EHRDSDTYRC EDRSPSFGED YYGSSRCHHR RRSREREPYR 251 300 BACU017912/1-507 TRKHAHHCHK RRTRSCSSAS SPS------- ---------- ---------- ENSTTRP00000007556/1-514 TRKHAHHCHK RRTRSCSSAS SVSGGQSVLA GARVPCNIPI VIYAVCLMKC bmy_11969T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSP00000378505/1-638 TRKHAHHCHK RRTRSCSSAS S--------- ---------- ---------- ENSBTAP00000009609/1-490 TRKHAHHCHK RRTRSCSSAS S--------- ---------- ---------- 301 350 BACU017912/1-507 ---------- ---------- ---------- ---------- ------LRLA ENSTTRP00000007556/1-514 WDLENPINQP TGSSSPPLPL TDTSICQSEP PTMRLVGWRF GGRCMQRSQQ bmy_11969T0/1-411 ---------- ---------- ---------- ---------- ------RSQQ ENSP00000378505/1-638 ---------- ---------- ---------- ---------- ------RSQQ ENSBTAP00000009609/1-490 ---------- ---------- ---------- ---------- ------RSQQ 351 400 BACU017912/1-507 GLDEIVGNLG EGTFGKVVEC LDHARSCRSS VLQILMPCFF SLLDEIVGNL ENSTTRP00000007556/1-514 SSKRSSRSVE DDKEGHLV-- ------CRIG D-------WL QERYEIVGNL bmy_11969T0/1-411 SSKRSSRSVE DDKEGHLV-- ------CRIG D-------WL QERYEIVGNL ENSP00000378505/1-638 SSKRSSRSVE DDKEGHLV-- ------CRIG D-------WL QERYEIVGNL ENSBTAP00000009609/1-490 SSKRSSRSVE DDKEGHLV-- ------CRIG D-------WL QERYEIVGNL 401 450 BACU017912/1-507 GEGTFGKVVE CLDHARGKSQ VALKIIRNVG KYREAARLEI NVLKKIKEKD ENSTTRP00000007556/1-514 GEGTFGKVVE CLDHARGKSQ VALKIIRNVG KYREAARLEI NVLKKIKEKD bmy_11969T0/1-411 GEGTFGKVVE CLDHARGKSQ VALKIIRNVG KYREAARLEI NVLKKIKEKD ENSP00000378505/1-638 GEGTFGKVVE CLDHARGKSQ VALKIIRNVG KYREAARLEI NVLKKIKEKD ENSBTAP00000009609/1-490 GEGTFGKVVE CLDHARGKSQ VALKIIRNVG KYREAARLEI NVLKKIKEKD 451 500 BACU017912/1-507 KENKFLCVLM SDWFNFHGHM CIAFELLGKN TFEFLKENNF QPYPLPHVRH ENSTTRP00000007556/1-514 KENKFLCVLM SDWFNFHGHM CIAFELLGKN TFEFLKENNF QPYPLPHVRH bmy_11969T0/1-411 KENKFLCVLM SDWFNFHGHM CIAFELLGKN TFEFLKENNF QPYPLPHVRH ENSP00000378505/1-638 KENKFLCVLM SDWFNFHGHM CIAFELLGKN TFEFLKENNF QPYPLPHVRH ENSBTAP00000009609/1-490 KENKFLCVLM SDWFNFHGHM CIAFELLGKN TFEFLKENNF QPYPLPHVRH 501 550 BACU017912/1-507 MAYQLCHALR FLHENQLTHT DLKPENILFV NSEFETLYNE HK-------- ENSTTRP00000007556/1-514 MAYQLCHALR FLHENQLTHT DLKPENILFV NSEFETLYNE HK-------- bmy_11969T0/1-411 MAYQLCHALR FLHENQLTHT DLKPENILFV NSEFETLYNE HKVLVGEKIE ENSP00000378505/1-638 MAYQLCHALR FLHENQLTHT DLKPENILFV NSEFETLYNE HK-------- ENSBTAP00000009609/1-490 MAYQLCHALR FLHENQLTHT DLKPENILFV NSEFETLYNE HK-------- 551 600 BACU017912/1-507 ---------- ---------- --SCEEKSVK NTSIRVADFG SATFDHEHHT ENSTTRP00000007556/1-514 ---------- ---------- --SCEEKSVK NTSIRVADFG SATFDHEHHT bmy_11969T0/1-411 ALFQGALPTR TDSTWLTFLA LQSCEEKSVK NTSIRVADFG SATFDHEHHT ENSP00000378505/1-638 ---------- ---------- --SCEEKSVK NTSIRVADFG SATFDHEHHT ENSBTAP00000009609/1-490 ---------- ---------- --SCEEKSVK NTSIRVADFG SATFDHEHHT 601 650 BACU017912/1-507 TIVATRHYRP PEVILELGWA QPCDVWSIGC ILFEYYRGFT LFQTHENREH ENSTTRP00000007556/1-514 TIVATRHYRP PEVILELGWA QPCDVWSIGC ILFEYYRGFT LFQTHEIREH bmy_11969T0/1-411 TIVATRHYRP PEVILELGWA QPCDVWSIGC ILFEYYRGFT LFQTHENREH ENSP00000378505/1-638 TIVATRHYRP PEVILELGWA QPCDVWSIGC ILFEYYRGFT LFQTHENREH ENSBTAP00000009609/1-490 TIVATRHYRP PEVILELGWA QPCDVWSIGC ILFEYYRGFT LFQTHENREH 651 700 BACU017912/1-507 LVMMEKILGP IPSHMIHRTR KQKYFYKGGL VWDENSSDGR YVKENCKPLK ENSTTRP00000007556/1-514 LVMMDKILRP IPSHMIHRTX XXXXXXXXXX XXXXNSSDGR YVKENCKPLK bmy_11969T0/1-411 LVMMEKILGP IPSHMIHRTR KQKYFYKGGL VWDENSSDGR YVKENCKPLK ENSP00000378505/1-638 LVMMEKILGP IPSHMIHRTR KQKYFYKGGL VWDENSSDGR YVKENCKPLK ENSBTAP00000009609/1-490 LVMMEKILGP IPSHMIHRTR KQKYFYKGGL VWDENSSDGR YVKENCKPLK 701 750 BACU017912/1-507 SYMLQDSPEH VQLFDLMRRM LEFDPAQRIT LAEALLHPFF AGLTPEERSF ENSTTRP00000007556/1-514 SYMLQDSPEH VQLFDLMRRM LEFDPAQRIT LAEALLHPFF AGLTPEERSL bmy_11969T0/1-411 SYMLQDSLEH VQLFDLMRRM LEFDPAQRIT LAEALLHPFF AGLTPEERSF ENSP00000378505/1-638 SYMLQDSLEH VQLFDLMRRM LEFDPAQRIT LAEALLHPFF AGLTPEERSF ENSBTAP00000009609/1-490 SYMLQDTLEH VQLFDLMRRM LEFDPAQRIT LAEALLHPFF AGLTPEERSF 751 800 BACU017912/1-507 HTSRNPSR ENSTTRP00000007556/1-514 HTSRNPSR bmy_11969T0/1-411 HTSRNPSR ENSP00000378505/1-638 HTSRNPSR ENSBTAP00000009609/1-490 HTSRNPSR