KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:54 2014 Check: 00 .. Name: ENSBTAP00000009613/1-509 Len: 538 Check: 3130 Weight: 1.00 Name: ENSTTRP00000007562/1-506 Len: 538 Check: 2321 Weight: 1.00 Name: ENSP00000320503/1-508 Len: 538 Check: 8701 Weight: 1.00 Name: bmy_11967T0/1-272 Len: 538 Check: 4306 Weight: 1.00 Name: BACU017911/1-536 Len: 538 Check: 1327 Weight: 1.00 // 1 50 ENSBTAP00000009613/1-509 MATDWLGSIV SINCGDSLGV YQGRVSAVDQ VSQTISLTRP FHNGVKCLVP ENSTTRP00000007562/1-506 MAADWLGSIV SINCGDSLGV YQGRVSAVDQ VSQTISLTRP FHNGVKCLVP ENSP00000320503/1-508 MATDWLGSIV SINCGDSLGV YQGRVSAVDQ VSQTISLTRP FHNGVKCLVP bmy_11967T0/1-272 MATDWLGSIV SINCGDSLGV YQGRVSAVDQ VSQTISLTRP FHNGVKCLVP BACU017911/1-536 MATDWLGSIV SINCGDSLGV YQGRVSAVDQ VSQTISLTRP FHNGVKCLVP 51 100 ENSBTAP00000009613/1-509 EVTFRAGDIT ELKILEIPGP GETQHFGDLH QTELGSSGVG CQVGINQNGT ENSTTRP00000007562/1-506 EVTFRAGDIT ELKILEIPGP GENQHFGDLH QTELGPSGVG CQVGINQNGT ENSP00000320503/1-508 EVTFRAGDIT ELKILEIPGP GDNQHFGDLH QTELGPSGAG CQVGINQNGT bmy_11967T0/1-272 EVTFRAGDIT ELKILEIPGP GENQHFGDLH QTELGPSGVG CQVGVNQNGT BACU017911/1-536 EVTFRAGDIT ELKILEIPGP GENQHFGDLH QTELGPSGVG CQVGVNQNGT 101 150 ENSBTAP00000009613/1-509 GKLVKKPASS SSVPQNIPKR TDVKSQDVAI SPQQQQCSKS YVDRHTESLS ENSTTRP00000007562/1-506 GKLVKKPASS SSAPQNIPKR TDVKSQDVAV SP-QQQCSKS YVDRHMESLT ENSP00000320503/1-508 GKFVKKPASS SSAPQNIPKR TDVKSQDVAV SPQQQQCSKS YVDRHMESLS bmy_11967T0/1-272 GKLVKKPASS SSAPQNIPKR TDVKSQDVAV SP-QQQCSKS YVDRHMESLS BACU017911/1-536 GKLVKKPASS SSAPQNIPKR TDVKSQDVAV SP-QQQCSKS YVDRHMESLS 151 200 ENSBTAP00000009613/1-509 QSKSFRRRHN SSGSSSSRHP NQATPKKSGL KNGQMKNKDD ECFGDDIEEI ENSTTRP00000007562/1-506 QSKSFRRRHN SW-SSSS-HP NQATPKKSGL KNGQMKNKDD ECFGDDIEEI ENSP00000320503/1-508 QSKSFRRRHN SW-SSSSRHP NQATPKKSGL KNGQMKNKDD ECFGDDIEEI bmy_11967T0/1-272 QSKSFRRRHN SW-SSSSRHP NQATPKKSGL KNGQMKNKDD ECFGDDIEEI BACU017911/1-536 QSKSFRRRHN SW-SSSSRHP NQATPKKSGL KNGQMKNKDD ECFGDDIEEI 201 250 ENSBTAP00000009613/1-509 PDTDFDFEGN LALFDKAAVF EEIDTYERRS GTRSRGIPNE RPTRYRHDEN ENSTTRP00000007562/1-506 PDTDFDFEGN LALFDKAAVF EEIDTYERRS GTRSRGIPSE RPTRYRHDEN ENSP00000320503/1-508 PDTDFDFEGN LALFDKAAVF EEIDTYERRS GTRSRGIPNE RPTRYRHDEN bmy_11967T0/1-272 PDTDFDFEGN LALFDKAAVF EEIDTYERRS GTRSRGIPNE RPTRYRHDEN BACU017911/1-536 PDTDFDFEGN LALFDKAAVF EEIDTYERRS GTRSRGIPNE RPTRYRHDEN 251 300 ENSBTAP00000009613/1-509 ILESEPIVYR RITVPHNVSK EFCTDSGLVV PSISYELHKK LLAVAEKHGL ENSTTRP00000007562/1-506 ILESEPIVYR RITVPHNMGK EFCTDSGLVV PSISYELHKK LLSVAEKHGL ENSP00000320503/1-508 ILESEPIVYR RIIVPHNVSK EFCTDSGLVV PSISYELHKK LLSVAEKHGL bmy_11967T0/1-272 ILESEPIVYR RITVPHNVSK EFCT------ ---------- ---------- BACU017911/1-536 ILESEPIVYR RITVPHNVSK EFCTDSGLVV PSISYELHKK LLSVAEKHGL 301 350 ENSBTAP00000009613/1-509 TLERRLEMTG VCASQMALTL LGGPNRLNPK NVHQRPAVAL LCGPHVKGAQ ENSTTRP00000007562/1-506 TLERRLEMTG VCASQMALTL LGGPNRLNPK NVHQRPTVAL LCGPHVKGAQ ENSP00000320503/1-508 TLERRLEMTG VCASQMALTL LGGPNRLNPK NVHQRPTVAL LCGPHVKGAQ bmy_11967T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU017911/1-536 TLERRLEMTG VCASQMALTL LGGPNRLNPK NVHQRPTVAL LCGPHVKGAQ 351 400 ENSBTAP00000009613/1-509 GISCGRHLAN HDVQVILFLP NFVKMLESIT NELSLFSKTQ GQQVSSLKDL ENSTTRP00000007562/1-506 GISCGRHLAN HDVQVILFLP NFVKMLESIT NELSLFSKTQ GQQVSSLKDL ENSP00000320503/1-508 GISCGRHLAN HDVQVILFLP NFVKMLESIT NELSLFSKTQ GQQVSSLKDL bmy_11967T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU017911/1-536 GISCGRHLAN HDVQVILFLP NFVKMLESIT NELSLFSKTQ GQQVSSLKDL 401 450 ENSBTAP00000009613/1-509 PTSPVDLVIN CLDCPENAFL RDQPWYKAAV AWANQNRAPV LSIDPPVHEG ENSTTRP00000007562/1-506 PTSPVDLVIN CLDCPENAFL RDQPWYKAAV AWANQNRAPV LSIDPPVHEV ENSP00000320503/1-508 PTSPVDLVIN CLDCPENVFL RDQPWYKAAV AWANQNRAPV LSIDPPVHEV bmy_11967T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU017911/1-536 PTSPVDLVIN CLDCPENAFL RDQPWYKAAV AWANQNRAPV LSIDPPVHEV 451 500 ENSBTAP00000009613/1-509 EQGIDAKWSL ALGLPLPLGE HAGR------ ---------- ---------- ENSTTRP00000007562/1-506 EQGIDAKWSL ALGLPLPLGE HAGR------ ---------- ---------- ENSP00000320503/1-508 EQGIDAKWSL ALGLPLPLGE HAGR------ ---------- ---------- bmy_11967T0/1-272 ---------- ---------- ---------- ---------- ---------- BACU017911/1-536 EQGIDAKWSL ALGLPLPLGE HAGRXXXXXH SPAGIPGGGH QLPLALWLQI 501 550 ENSBTAP00000009613/1-509 ---VYLCDIG IPQQVFQEVG INYHSPFGCK FVIPLHSA ENSTTRP00000007562/1-506 ---VYLCDIG IPQQVFQEVG ISYHSPFGCK FVIPLHSA ENSP00000320503/1-508 ---IYLCDIG IPQQVFQEVG INYHSPFGCK FVIPLHSA bmy_11967T0/1-272 ---------- ---------- ---------- -------- BACU017911/1-536 CHPIALCLEG LWAGWTLQSP AAPDNERLKD VKLHGSCC