KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:38:55 2014 Check: 00 .. Name: ENSTTRP00000006642/1-826 Len: 851 Check: 5938 Weight: 1.00 Name: BACU019259/1-829 Len: 851 Check: 278 Weight: 1.00 Name: bmy_11117T0/1-837 Len: 851 Check: 1319 Weight: 1.00 Name: ENSBTAP00000009627/1-816 Len: 851 Check: 1474 Weight: 1.00 // 1 50 ENSTTRP00000006642/1-826 MRFLEARSLA VAMGDTVVEP APLKPTSEPT PGPSGNNGGS LLSVITEGVG BACU019259/1-829 FRSLEARSLA VAMGDTVVEP APLKPTSEPT PGPSGNNGGS LLSVITEGVG bmy_11117T0/1-837 ---------- --MGDTVVEP APLKPTSEPT PGPSGNNGGS LLSVITEGVG ENSBTAP00000009627/1-816 ---------- --MGDTIVEP APLKPTSEPA PGPPGNNGGS LLSVITEGVG 51 100 ENSTTRP00000006642/1-826 ELSVIDPEVA RKACQK-LEK VKLLHGGVTI SSRGTPLELV NGDGVDSEIR BACU019259/1-829 ELSVIDPEVA QKACQEVLEK VKLLHGGVAI SSRGTPLELV NGDGVDSEIR bmy_11117T0/1-837 ELSVIDPEVA QKACQEVLEK VKLLHGGVAI SSRGTPLELV NGDXVDSEIR ENSBTAP00000009627/1-816 ELSVIDPEVA QKACQEVLEK VKLLHGGVAI SSRGTPLELV NGDGVDSEIR 101 150 ENSTTRP00000006642/1-826 CLXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019259/1-829 CLDDPPSQIR EEEDEMGATV ASGTAKGARR RRQNNSAKQS WLLRLFESKL bmy_11117T0/1-837 CLDDPPSQIR EEEDEMGATV ASGTAKGARR RRQNNSAKQS WLLRLFESKL ENSBTAP00000009627/1-816 CLDDPPAQIR EEEDEMGATV ASGTAKGARR RRQNNSAKQS WLLRLFESKL 151 200 ENSTTRP00000006642/1-826 XXXXMAISYL YNSKEPGVQA YIGNRLFCFR NEDVDFYLPQ LLNMYIHMDE BACU019259/1-829 FDISMAISYL YNSKEPGVQA YIGNRLFCFR NEDVDFYLPQ LLNMYIHMDE bmy_11117T0/1-837 FDISMAISYL YNSKEPGVQA YIGNRLFCFR NEDVDFYLPQ LLNMYIHMDE ENSBTAP00000009627/1-816 FDISMAISYL YNSKEPGVQA YIGNRLFCFR NEDVDFYLPQ LLNMYIHMDE 201 250 ENSTTRP00000006642/1-826 DVGDAIKPYI VHRCRQSINF SLQCALLLGA YSSDMHISTQ RHSRGTKLRK BACU019259/1-829 DVGDAIKPYI VHRCRQSINF SLQCALLLGA YSSDMHISTQ RHSRGTKLRK bmy_11117T0/1-837 DVGDAIKPYI VHRCRQSINF SLQCALLLGA YSSDMHISTQ RHSRGTKLRK ENSBTAP00000009627/1-816 DVGDAIKPYI VHRCRQSINF SLQCALLLGA YSSDMPISTQ RHSRGTKLRK 251 300 ENSTTRP00000006642/1-826 LILSDELKPA HRKRELPSLS PAPDTGLSPS KRTHQRSKSD ATASISLSSN BACU019259/1-829 LILSDELKPA HRKRELPSLS PALDTGLSPS KRTHQRSKSD ATASISLSSN bmy_11117T0/1-837 LILSDELKPA HRKRELPSLS PAPDTGLSPS KRTHQRSKSD ATASISLSSN ENSBTAP00000009627/1-816 LILSDELKPA HRKRELPSLS PAPDTGLSPS KRTHQRSKSD ATASISLSSN 301 350 ENSTTRP00000006642/1-826 LKRTASNPKV ENEDEELSSS TESIDISFSS PVRLAPEREF IKSLMAIGKR BACU019259/1-829 LKRTASNPKV ENEDEELSSS TESIDISFSS PVRLAPEREF IKSLMAIGKR bmy_11117T0/1-837 LKRTASNPKV ENEDEELSSS TESIDISFSS PVRLAPEREF IKSLMAIGKR ENSBTAP00000009627/1-816 LKRTASNPKV ENEDEELSSS TESIDNSFSS PVRLAPEREF IKSLMAIGKR 351 400 ENSTTRP00000006642/1-826 LATLPTKEQK TQRLISELSL LNHKLPARVW LPTAAFDHHV VRVPHTQAVV BACU019259/1-829 LATLPTKEQK TQRLISELSL LNHKLPARVW LPTAGFDHHV VRVPHTQAVV bmy_11117T0/1-837 LATLPTKEQK TQRLISELSL LNHKLPARVW LPTAGFDHHV VRVPHTQAVV ENSBTAP00000009627/1-816 LATLPTKEQK TQRLISELSL LNHKLPARVW LPTAGFDHHV VRVPHTQAVV 401 450 ENSTTRP00000006642/1-826 LNSKDKAPYL IYVEVLECEN FDTTNVPARI PENRIRSTRS VENLPECGIT BACU019259/1-829 LNSKDKAPYL IYVEVLECEN FDTTNVPARI PENRIRSTRS VENLPECGIS bmy_11117T0/1-837 LNSKDKAPYL IYVEVLECEN FDTTNVPARI PENRIRSTRS VENLPECGIT ENSBTAP00000009627/1-816 LNSKDKAPYL IYVEVLECEN FDTTSVPARI PENRIRSTRS VENLPECGIT 451 500 ENSTTRP00000006642/1-826 HEQRAGSFST VPNYDNDDEA WSVDDIGELQ VELPEVHTNS CDNISQFSVD BACU019259/1-829 HEQRAGSFST VPNYDNDDEA WSVDDIGELQ VELPEVHTNS CDNISQFSVD bmy_11117T0/1-837 HEQRAGSFST VPNYDNDDEA WSVDDIGELQ VELPEVHTNS CDNISQFSVD ENSBTAP00000009627/1-816 HEQRAGSFST VPNYDNDDEA WSVDDIGELQ VELPEVHTNS CDNISQFSVD 501 550 ENSTTRP00000006642/1-826 SITSQESKEP VFIAAGDIRR RLSEQLAHTP TAFKRDPEDP SAVAL-EPWQ BACU019259/1-829 SITSQESKEP VFIAAGDIRR RLSEQLAHTP TAFKRDPEDP SAVALKEPWQ bmy_11117T0/1-837 SITSQESKEP VFIAAGDIRR RLSEQLAHTP TAFKRDPEDP SAVALKEPWQ ENSBTAP00000009627/1-816 SITSQESKEP VFIAAGDIRR RLSEQLAHTP TAFKRDPEDP SAVALKEPWQ 551 600 ENSTTRP00000006642/1-826 EKVRXXXXXX XXXXXXXXXX XXXXXXXX-- XXXXXXXXXX XXXXXXXSIW BACU019259/1-829 EKVRP-PEVI TQVLLQGALL GTIFLPRGEF SLLPPFRESQ CLCVSSQSIW bmy_11117T0/1-837 EKVRRIREGS PYGHLPNWRL LSVIVKCG-- DDLRQELLAF QVLKQLQSIW ENSBTAP00000009627/1-816 EKVRRIREGS PYGHLPNWRL LSVIVKCG-- DDLRQELLAF QVLKQLQSIW 601 650 ENSTTRP00000006642/1-826 EQERVPLWIK PYKILVISAD SGMIEPVVNA VSIHQVKKQS QLSLLDYFLQ BACU019259/1-829 EQERVPLWIK PYKILVISAD SGMIEPVVNA VSIHQVKKQS QLSLLDYFLQ bmy_11117T0/1-837 EQERVPLWIK PYKILVISAD SGMIEPVVNA VSIHQVKKQS QLSLLDYFLQ ENSBTAP00000009627/1-816 EQERVPLWIK PYKILVISAD SGMIEPVVNA VSIHQVKKQS QLSLLDYFLQ 651 700 ENSTTRP00000006642/1-826 EHGSYTTEAF LSAQRNFVQS CAGYCLVCYL LQVKDRHNGN ILLDAEGHII BACU019259/1-829 EHGSYTTEAF LSAQRNFVQS CAGYCLVCYL LQVKDRHNGN ILLDAEGHII bmy_11117T0/1-837 EHGSYTTEAF LSAQRNFVQS CAGYCLVCYL LQVKDRHNGN ILLDAEGHII ENSBTAP00000009627/1-816 EHGSYTTEAF LSAQRNFVQS CAGYCLVCYL LQVKDRHNGN ILLDAEGHII 701 750 ENSTTRP00000006642/1-826 HIDFGFILSS SPRNLGFETS AFKLTTEFVD VMGGLDGDMF NYYKMLMLQG BACU019259/1-829 HIDFGFILSS SPRNLGFETS AFKLTTEFVD VMGGLDGDMF NYYKMLMLQG bmy_11117T0/1-837 HIDFGFILSS SPRNLGFETS AFKLTTEFVD VMGGLDGDMF NYYKMLMLQG ENSBTAP00000009627/1-816 HIDFGFILSS SPRNLGFETS AFKLTTEFVD VMGGLDGDMF NYYKMLMLQG 751 800 ENSTTRP00000006642/1-826 LIAARKHMDK VVQIVEIMQQ G--------- ---------- --SQLPCFHG BACU019259/1-829 LIAARKHMDK VVQIVEIMQQ G--------- ---------- --SQLPCFHG bmy_11117T0/1-837 LIAARKHMDK VVQIVEIMQQ GCRRCSGASP SGPVMTVAQV ICSQLPCFHG ENSBTAP00000009627/1-816 LIAARKHMDK VVQIVEIMQQ G--------- ---------- --SQLPCFHG 801 850 ENSTTRP00000006642/1-826 SSTIRNLKER FHMSMTEEQL QLLVEQMVDG SMRSITTKLY DGFQYLTNGI BACU019259/1-829 SSTIRNLKER FHMSMTEEQL QLLVEQMVDG SMRSITTKLY DGFQYLTNGI bmy_11117T0/1-837 SSTIRNLKER FHMSMTEEQL QLLVEQMVDG SMRSITTKLY DGFQYLTNGI ENSBTAP00000009627/1-816 SSTIRNLKER FHMSMTEEQL QLLVEQMVDG SMRSITTKLY DGFQYLTNGI 851 900 ENSTTRP00000006642/1-826 M BACU019259/1-829 M bmy_11117T0/1-837 M ENSBTAP00000009627/1-816 M