KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:38:59 2014 Check: 00 .. Name: ENSP00000326477/1-719 Len: 764 Check: 1044 Weight: 1.00 Name: ENSBTAP00000009641/1-700 Len: 764 Check: 6853 Weight: 1.00 Name: ENSTTRP00000012270/1-696 Len: 764 Check: 2275 Weight: 1.00 Name: BACU015796/1-664 Len: 764 Check: 8149 Weight: 1.00 Name: bmy_05147T0/1-560 Len: 764 Check: 9487 Weight: 1.00 // 1 50 ENSP00000326477/1-719 ---------- ---------- ---------- ----MGEKNG DAKTFWMELE ENSBTAP00000009641/1-700 ---------- ---------- ---------- ----MGEKNG DAKSFWMELE ENSTTRP00000012270/1-696 ---------- ---------- ---------- ----MGEKNG DAKTFWMELE BACU015796/1-664 MPSSRLRISP LVQPESARQP ESSGSQSGDG ALRRCRVADG DAKTFWMELE bmy_05147T0/1-560 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000326477/1-719 DDGKVDFIFE QVQNVLQSLK QKIKDGSATN KEYIQAMILV NEATIINSST ENSBTAP00000009641/1-700 DDGKVDFIFE QVQNVLQSLK QKIKDGSATN KEYIQAMILV KDAIINHNST ENSTTRP00000012270/1-696 DDGKVDFIFE QVQNVLQSLK RKIKDGSATN KEYIQAMILV KEATINNNST BACU015796/1-664 DDGKVDFIFE QVQNVLQSLK QKIKDGSATN KEYIQAMILV KEATINNNSA bmy_05147T0/1-560 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000326477/1-719 SIKGASQKEV NAQSSDPMPV TQKEQENKSN AFPSTSCENS FPEDCTFLTT ENSBTAP00000009641/1-700 LIK------- -----DHRSV TKNAEENKSS SLPSTSYEDF FPKDCTSLST ENSTTRP00000012270/1-696 LIR------- -----DHTSV TQNAQENKSS SLPSTSHEDS FPEDYTSLST BACU015796/1-664 LIK------- -----DHTSV TQNAQENKSS SLPSTSHEDS FPEDYTSLST bmy_05147T0/1-560 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000326477/1-719 ENKEILSLED KVVDFREKDS SSNLSYQSHD CSGACLMKMP LNLKGENPLQ ENSBTAP00000009641/1-700 ENQEIPPMEN KVADFREKES SLNLSYQKHQ CSGSCLMKMP FTFKGENPLQ ENSTTRP00000012270/1-696 ENKEIPPLEN KVADFREKES SSNLSYQKHD CSSACLMKMP LTFKGENPLQ BACU015796/1-664 ENKAIPPLEN KVADFREKES SSNLSYQKHD CSGACLMKMP LTFKGENPLQ bmy_05147T0/1-560 ---------- ---------- ---------- ------MKMP LTFKGENPLQ 201 250 ENSP00000326477/1-719 LPIKCHFQRR HAKTNSHSSA LHVSYKTPCG RSLRNVEEVF RYLLETECNF ENSBTAP00000009641/1-700 LPIKCHFQRR HAKTNSHSSA LHVSYKTPCG RSLRNMEEVF RYLLETECNF ENSTTRP00000012270/1-696 LPIKCHFQRR HAKTNSHSSA LHVSYKTPCG RSLRNMEEVF RYLLETECNF BACU015796/1-664 LPIKCHFQRR HAKTNSHSSA LHVSYKTPCG RSLRNVEEVF RYLLETECNF bmy_05147T0/1-560 LPIKCHFQRR HAKTNSHSSA LHVSYKTPCG RSLRNVEEVF RYLLETECNF 251 300 ENSP00000326477/1-719 LFTDNFSFNT YVQLARNYPK QKEVVSDVDI SNGVESVPIS FCNEIDSRKL ENSBTAP00000009641/1-700 LFTDNFSFNT YAQLTRNYPK EEEIVSDVDI SNGVESVPIS FCNEIDNRKL ENSTTRP00000012270/1-696 LFTDNFSFNT YVQLTRNYPR QEEIVSDTDI SNGVESVPIS FCNEIDNRKL BACU015796/1-664 LFTDNFSFNT YVQLTRNYPK QEEIVSDTDI SNGVESVPIS FCNEIDNRKL bmy_05147T0/1-560 LFTDNFSFNT YVQLTRNYPK QEEIVSDTDI SNGVESVPIS FCNEVDNRKL 301 350 ENSP00000326477/1-719 PQFKYRKTVW PRAYNLTNFS SMFTDSCDCS EGCIDITKCA CLQLTARNAK ENSBTAP00000009641/1-700 PQFKYRKTMW PRAYYLNSFS NMFTDSCDCS EGCIDITKCA CLQLTARNAK ENSTTRP00000012270/1-696 PQFKYRKTMW PRAYYLNSFS NMFTDSCDCS EGCIDITKCA CLQLTARNAK BACU015796/1-664 PHFKYRKTVC PRAYYLNSFS NMFTDSCDCS EGCIDI---- ---------- bmy_05147T0/1-560 PQFKYRKTMC PRAYYLNSFS NMFTDSCDCS EGCIDITKCA CLQLTARNAK 351 400 ENSP00000326477/1-719 TSPLSSDKIT TGYKYKRLQR QIPTGIYECS LLCKCNRQLC QNRVVQHGPQ ENSBTAP00000009641/1-700 TCPLSNNKIT TGYKYKRLER QIPTGIYECS LLCKCDRRIC QNRVVQHGPQ ENSTTRP00000012270/1-696 TCPLLSSKIT TGYKYKRLQR QIPTGIYECS LLCKCNRRMC QNRVVQHGPQ BACU015796/1-664 ---------- ---------- -----IYECS LLCKCNRRMC QNRVVQHGPQ bmy_05147T0/1-560 TCPLSSSKIT TGYKYKRLQR QIPTGIYECS LLCKCNRRMC QNRVVQHGPQ 401 450 ENSP00000326477/1-719 VRLQVFKTEQ KGWGVRCLDD IDRGTFVCIY SGRLLSRANT EKSYGIDENG ENSBTAP00000009641/1-700 VRLQVFKTEK KGWGVRCLDD IDRGTFVCIY SGRLLSRSDT EKPDAIDENG ENSTTRP00000012270/1-696 VRLQVFKTE- KGWGVRCLDD IDRGT-SRIY --RLLSRSNT ENSDAIDENG BACU015796/1-664 VRLQVFKTEK KGWGVRCLDD IDRGTFVCIY SGRLLSRSNT EKPDAIDENG bmy_05147T0/1-560 VRLQVFKTEK KGWGVRCLDD IDRGTFVCIY SGRLLSRSNT EKPDAIDENG 451 500 ENSP00000326477/1-719 RDENTMKNIF SKKRKLEVAC SDCEVEVLPL GLETHPRTAK TEKCPPKFSN ENSBTAP00000009641/1-700 KEENIMKNMF SRKRKIEVA- -DCEVEVIPI ELEARPRSME TQEYPPKLHN ENSTTRP00000012270/1-696 KEENIMKNMF SKKRKIEVA- -DCEVEVIPL ELETYPRSAV TEECPPKLHN BACU015796/1-664 KEENIMKNMF SKKRKIEVT- -DCEVEVIPL ELETYPRSAV TEECPPKLHN bmy_05147T0/1-560 KEENIMKNMF SKKRKIEVT- -DCEVEVIPL ELGTYPRSAV TEECPPKLHN 501 550 ENSP00000326477/1-719 NPKELTVETK YDNISRIQYH SVIRDPESKT AIFQHNGKKM ---------- ENSBTAP00000009641/1-700 NTKEPITGMK YNSISRIRYH SVIRSPKTKT VIIQHNGKNM ---------- ENSTTRP00000012270/1-696 NPKEPIXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ---------- BACU015796/1-664 NPKEPVLEMK CNSISRIQYH SVIRSPKTKM ASIQHNGKKM EVKTSSLFSF bmy_05147T0/1-560 NPKEPIIEMK CNSISRIQYH SVIRSPKTKT ASIQHNGKKM ---------- 551 600 ENSP00000326477/1-719 -EFVSSESVT PEDNDGFKPP REHLNSKTKG AQKDSSSNHV DEFEDNLLIE ENSBTAP00000009641/1-700 -GFTSSESVT SEDNGELNPA QVHLNSKAKE MRKDSSSNQV EDCKDSPVID ENSTTRP00000012270/1-696 -GFTSSESVT SEDNGGFKPT QVHLNSKAKE MREDSSSNQA EDSEDNPVIE BACU015796/1-664 KGFTSSESVT SEDNGGFKPT QVHLNSKAKE MREDSSSNQV EDSEDNPVIE bmy_05147T0/1-560 -GFTSSESVT SEDNGGFKPT QVHLNSKAKE MREDSSSNQV EDSEDNPVIE 601 650 ENSP00000326477/1-719 SDVIDITKYR EETPPRSRCN QATTLDNQNI KKAIEVQIQK PQEGRSTACQ ENSBTAP00000009641/1-700 SDVIDITKCR EDTPPGDTCH QAVTLDNKN- ----EVQIQK PQEEKSPACQ ENSTTRP00000012270/1-696 SDVIDITKCR EETPPGGRCH QTVTLDDQN- ----EIQIQK PQEEKSPACQ BACU015796/1-664 SDVIDITRCR EETPPGGRCH QTVTLDDQN- ----EIQIQK PQEEKPPACQ bmy_05147T0/1-560 SDVIDITKCR EETPPGGRCH QTVTLDDQN- ----EIQIQK PQEEKSPTCQ 651 700 ENSP00000326477/1-719 RQQVFCDEEL LSETKNTSSD SLTKFNKGNV FLLDATKEGN VGRFLNHSCC ENSBTAP00000009641/1-700 NHQVFCGKEL PNETKDASSD SLEKFNKGNV FLLDATKEGN VGRFLNHSCC ENSTTRP00000012270/1-696 NQQVFCDKEL PSETKNASSD SLKKFNKGSV FLLDATKEGN VGRFLNHSCC BACU015796/1-664 NQQVFCDKEL PSETKNASSD SLKKFNEGNV FLLDATKEGN VGRFLNES-- bmy_05147T0/1-560 NQQVFCDKEL PSETKNASSD SLKKFXEGNV FLLDATKEGN VGRFLNHSCC 701 750 ENSP00000326477/1-719 PNLLVQNVFV ETHNRNFPLV AFFTNRYVKA RTELTWDYGY EAGTVPEKEI ENSBTAP00000009641/1-700 PNLLVQNVFV ETHDRNFPLV AFFTNRYVKA RTELTWDYGY EAGTMPEKEI ENSTTRP00000012270/1-696 PNLLVQNVFV ETHDRNFPLV AFFTNRYVKA RTELTWDYGY EAGTMPEKEI BACU015796/1-664 -----EESWK E--DGNFDTL H--------- ---------- ---TSLERST bmy_05147T0/1-560 PNLLVQNVFV ETHDRNFPLV AFFTNRYVKA RTELTWDYGY EAGTMPEKEI 751 800 ENSP00000326477/1-719 FCQCGVNKCR KKIL ENSBTAP00000009641/1-700 LCQCGVNKCR RKIL ENSTTRP00000012270/1-696 FCQCGFNKCR KKIL BACU015796/1-664 LVH------- ---- bmy_05147T0/1-560 FCQCGVNKCR KKIL