KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:39:00 2014 Check: 00 .. Name: ENSP00000359025/1-592 Len: 592 Check: 6256 Weight: 1.00 Name: ENSBTAP00000009642/1-592 Len: 592 Check: 7314 Weight: 1.00 Name: bmy_15561T0/1-460 Len: 592 Check: 6465 Weight: 1.00 Name: ENSTTRP00000002962/1-592 Len: 592 Check: 6923 Weight: 1.00 // 1 50 ENSP00000359025/1-592 MAPPVAERGL KSVVWQKIKA TVFDDCKKEG EWKIMLLDEF TTKLLASCCK ENSBTAP00000009642/1-592 MAPPVTERGL KSVVWQKIKA TVFDDCKKEG EWKILLLDEF TTKLLASCCK bmy_15561T0/1-460 MAPPVTDRGL KSIVWQKIKA TVFDDCKKEG EWKIMLLDEF TTKLLASCCK ENSTTRP00000002962/1-592 MAPPVTDRGL KSIVWQKIKA TVFDDCKKEG EWKIMLLDEF TTKLLASCCK 51 100 ENSP00000359025/1-592 MTDLLEEGIT VVENIYKNRE PVRQMKALYF ITPTSKSVDC FLHDFASKSE ENSBTAP00000009642/1-592 MTDLLAEGIT VVENIYKNRE PVRQMKALYF ISPTSKSVDC FLRDFGGKSE bmy_15561T0/1-460 MTDLLAEGIT VVENIYKNRE PVRQMKALYF ISPTSK---- ---------- ENSTTRP00000002962/1-592 MTDLLAEGIT VVENIYKNRE PVRQMKALYF ISPTSKSVDC FLRDFGSKSE 101 150 ENSP00000359025/1-592 NKYKAAYIYF TDFCPDNLFN KIKASCSKSI RRCKEINISF IPHESQVYTL ENSBTAP00000009642/1-592 NKYKAAYIYF TDFCPDSLFN KIKASCSKSV RRCKEINISF IPLESQVYTL bmy_15561T0/1-460 ---------- ---------- ---------- ---------- ------VYTL ENSTTRP00000002962/1-592 NKYKAAYIYF TDFCPDSLFN KIKTSCSKTI RRCKEINISF IPLESQVYTL 151 200 ENSP00000359025/1-592 DVPDAFYYCY SPDPGNAKGK DAIMETMADQ IVTVCATLDE NPGVRYKSKP ENSBTAP00000009642/1-592 DVPDAFYYCY SPDPSNGNGK DTIMEAMAEQ IVTVCATLDE NPGVRYKSKP bmy_15561T0/1-460 DVPDAFYYCY SPDPSNANGK DIIMEAMAEQ IVTVCATLDE NPGVRYK--- ENSTTRP00000002962/1-592 DVPDAFYYCY TPDPSNAYGK DIIMEAMAEQ IVTVCATLDE NPGVRYKSKP 201 250 ENSP00000359025/1-592 LDNASKLAQL VEKKLEDYYK IDEKSLIKGK THSQLLIIDR GFDPVSTVLH ENSBTAP00000009642/1-592 LDNASKLAQL VEKKLENYYK IDEKSLIKGK THSQLIIIDR GFDPVSTVVH bmy_15561T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002962/1-592 LDNASKLAQL VEKKLENYYK IDEKSLIKGK THSQLIIIDR GFDPVSTVLH 251 300 ENSP00000359025/1-592 ELTFQAMAYD LLPIENDTYK YKTDGKEKEA ILEEEDDLWV RIRHRHIAVV ENSBTAP00000009642/1-592 ELTFQAMAYD LLPIENDTYK YKTDGKEKEA ILEEDDDLWV KIRHRHIAVV bmy_15561T0/1-460 ---------- ---------R YKTDGKEKEA ILEEDDDLWV RIRHRHIAVV ENSTTRP00000002962/1-592 ELTFQAMAYD LLPIENDTYK YKTDGKEKEA VLEEDDDLWV RIRHRHIAVV 301 350 ENSP00000359025/1-592 LEEIPKLMKE ISSTKKATEG KTSLSALTQL MKKMPHFRKQ ITKQVVHLNL ENSBTAP00000009642/1-592 LEEIPKLMKE ISSTKKATEG KTSLSALTQL MKKMPHFRKQ ITKQVVHLNL bmy_15561T0/1-460 LEEIPKLMKE ISSTKKATEG KTSLSALAQL MKKMPHFRKQ ITKQVVHLNL ENSTTRP00000002962/1-592 LEEIPKLMKE ISSTKKATEG KTSLSALAQL MKKMPHFRKQ ITKQVVHLNL 351 400 ENSP00000359025/1-592 AEDCMNKFKL NIEKLCKTEQ DLALGTDAEG QKVKDSMRVL LPVLLNKNHD ENSBTAP00000009642/1-592 AEDCMNKFKP NIEKLCKTEQ DLALGTDAEG QKVKDAMRVL LPVLLSKNHD bmy_15561T0/1-460 AEDCMNKFKP NIEKLCKTEQ DLALGTDAEG QKVKDAMRVL LPVLLNKNHD ENSTTRP00000002962/1-592 AEDCMNKFKP NIEKLCKTEQ DLALGTDAEG QKVKDAMRVL LPVLLSKNHD 401 450 ENSP00000359025/1-592 NCDKIRAILL YIFSINGTTE ENLDRLIQNV KIENESDMIR NWSYLGVPIV ENSBTAP00000009642/1-592 NYDKIRAILL YIFSINGTTE ENLDRLIQNV KIENESDMIR NWSYLGVPIV bmy_15561T0/1-460 NYDKIRAILL YIFSINGTTE ENLDRLIQNV KIENESDMIR NWSYLGVPIV ENSTTRP00000002962/1-592 NYDKIRAILL YIFSINGTTE ENLDRLIQNV KIENESDMIR NWSYLGVPIV 451 500 ENSP00000359025/1-592 PQSQQGKPLR KDRSAEETFQ LSRWTPFIKD IMEDAIDNRL DSKEWPYCSQ ENSBTAP00000009642/1-592 PPSQQGKPSR KDRSAEETFQ LSRWTPFIKD ILEDAIDNRL DSKEWPYCSQ bmy_15561T0/1-460 PPSQQGKPLR KDRSAEETFQ LSRWTPFIKD ILEDAIDNRL DSKEWPYCSQ ENSTTRP00000002962/1-592 PPSQQGKPLR KDRSAEETFQ LSRWTPFIKD ILEDAIDNRL DSKEWPYCSQ 501 550 ENSP00000359025/1-592 CPAVWNGSGA VSARQKPRAN YLEDRKNGSK LIVFVIGGIT YSEVRCAYEV ENSBTAP00000009642/1-592 CPAVWNGSGA VSARQKPRTN YLEDRKNGSK LIVFVIGGIT YSEMRCAYEV bmy_15561T0/1-460 CPAVWNGSGA VSARQKPRAN YLEDRKNGSK LIIFVIGGIT YSEMRCAYEV ENSTTRP00000002962/1-592 CPAVWNGSGA VSARQKPRAN YLEDRKNGSK LIVFVIGGIT YSEMRCAYEV 551 600 ENSP00000359025/1-592 SQAHKSCEVI IGSTHVLTPK KLLDDIKMLN KPKDKVSLIK DE ENSBTAP00000009642/1-592 SQAHKSCEVI IGSTHILTPR KLLDDIKMLN KPKDKVSFTK DE bmy_15561T0/1-460 SQAHKSCEVI IGSTHILTPK KLLDDIKMLN KPKDKVSFIK DE ENSTTRP00000002962/1-592 SQAHKSCEVI IGSTHILTPK KLLDDIKMLN KPKDKVSFIK DE