KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:02 2014 Check: 00 .. Name: ENSP00000240306/1-240 Len: 261 Check: 6661 Weight: 1.00 Name: ENSBTAP00000009672/1-255 Len: 261 Check: 8827 Weight: 1.00 Name: ENSTTRP00000002845/1-229 Len: 261 Check: 3479 Weight: 1.00 Name: bmy_06732T0/1-234 Len: 261 Check: 2416 Weight: 1.00 Name: BACU006419/1-234 Len: 261 Check: 3113 Weight: 1.00 // 1 50 ENSP00000240306/1-240 MTSLPCPLPG RDASKAVFPD LAPVPSVAAA YPLGLSPTTA ASPNLSYSRP ENSBTAP00000009672/1-255 MTSLPCPLPG PDASKAVFPD IAPVPSVVAA YQLGLSPATA AAPDLPYSGP ENSTTRP00000002845/1-229 MTSLPCPLPG PDASKAVFPD IAPVP----- YQLGLSPATA AASDLPYSGP bmy_06732T0/1-234 MTSLPCPLPG PDASKAVFPD IAPVPSVVAA YQLGLSPATA AASDLPYSGP BACU006419/1-234 MTSLPCPLPG PDASKAVFPD IAPVPSVVAA YQLGLSPATA AASDLPYSGP 51 100 ENSP00000240306/1-240 YGHLLSYPYT EPANPGDSYL SCQQPAALSQ PLCGPAEHPQ ELEADSEKPR ENSBTAP00000009672/1-255 YGHLLPYPYT GPAIPGDSYL PCQLSTAPSQ P------AHQ ERETDSEKPP ENSTTRP00000002845/1-229 YGHVLPYPYT GPATPGDSYL PCQLPTAPSQ Q------SHQ EWEPDSEKPP bmy_06732T0/1-234 YGHVLPYPYT GPATPGDSYL PCQLPTAPSQ Q------SHQ EREPDSEKPP BACU006419/1-234 YGHVLPYPYT GPATPGDSYL PCQLPTAPSQ Q------SHQ EREPDSEKPP 101 150 ENSP00000240306/1-240 LSPEPSERRP QAPAKKLRKP RTIYSSLQLQ HLNQRFQHTQ YLALPERAQL ENSBTAP00000009672/1-255 LSPEPPERRP QASTKKLRKP RTIYSSLQLQ HLNQRFQHTQ YLALPERAQL ENSTTRP00000002845/1-229 LSPEPSERRP QASTKKLRKP RTIYSSLQLQ HLNQRFQHTQ YLALPERAQL bmy_06732T0/1-234 LSPEPSERRP QASTKKLRKP RTIYSSLQLQ HLNQRFQHTQ YLALPERAQL BACU006419/1-234 LSPEPSERRP QASTKKLRKP RTIYSSLQLQ HLNQRFQHTQ YLALPERAQL 151 200 ENSP00000240306/1-240 AAQLGLTQT- ---------- ---------- QVKIWFQNKR SKYKKLLKQN ENSBTAP00000009672/1-255 AAQLGLTQTQ VGPVPSSTSL PQVCSLGTHP QVKIWFQNKR SKYKKLLKQN ENSTTRP00000002845/1-229 AAQLGLTQT- ---------- ---------- QVKIWFQNKR SKYKKLLKQN bmy_06732T0/1-234 AAQLGLTQT- ---------- ---------- QVKIWFQNKR SKYKKLLKQN BACU006419/1-234 AAQLGLTQT- ---------- ---------- QVKIWFQNKR SKYKKLLKQN 201 250 ENSP00000240306/1-240 SGGQEGDFPG RTFSVSPCSP PLPSLWDLPK AGTLPTSGYG NSFGAWYQHH ENSBTAP00000009672/1-255 SGGQEGDFPG RSPSLSPCSP PLPALWDLPK AGALPTGGYG NSFGAWYQHH ENSTTRP00000002845/1-229 SGGQEGDFPG RSPSLSPCSP PLPPPWDLPK AGALPTSAYG NNFGAWYQHH bmy_06732T0/1-234 SGGQEGDFPG RSPSLSPCSP PLPSLWDLPK AGALPTSGHG NNFGAWYQHH BACU006419/1-234 SGGQEGDFPG RSPSLSPCSP PLPSLWDLPK AGALPTSGYG NNFGAWYQHH 251 300 ENSP00000240306/1-240 SSDVLASPQM M ENSBTAP00000009672/1-255 SPDVLAPPQM M ENSTTRP00000002845/1-229 SPDVLAPPQM M bmy_06732T0/1-234 SPDVLAPPQM M BACU006419/1-234 SPDVLAPPQM M