KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:39:02 2014 Check: 00 .. Name: ENSP00000239882/1-619 Len: 619 Check: 5341 Weight: 1.00 Name: ENSBTAP00000009677/1-614 Len: 619 Check: 9432 Weight: 1.00 Name: bmy_18479T0/1-560 Len: 619 Check: 8699 Weight: 1.00 Name: BACU012157/1-614 Len: 619 Check: 2497 Weight: 1.00 // 1 50 ENSP00000239882/1-619 MAAVVQQNDL VFEFASNVME DERQLGDPAI FPAVIVEHVP GADILNSYAG ENSBTAP00000009677/1-614 MAAVVQQNDL VFEFASNVME DEQQLGDPAI FPAVIVEHVP GADILNSYAG bmy_18479T0/1-560 ---------- --------ME DEQQLGDPAI FPAVIVEHVP GADILNSYAG BACU012157/1-614 MAAVVQQNDL VFEFASNVME DEQQLGDPAI FPAVIVEHVP GADILNSYAG 51 100 ENSP00000239882/1-619 LACVEEPNDM ITESSLDVAE EEIIDDDDDD ITLTVEASCH DGDETIETIE ENSBTAP00000009677/1-614 LACVEEPNDM ITESSLDVAE EEIIDEDEDD ITLTVEASCH NGDETIETIE bmy_18479T0/1-560 LACVEEPNDM ITESSLDVAE EEIIDEDDDD ITLT------ ---------- BACU012157/1-614 LACVEEPNDM ITESSLDVAE EEIIDEDDDD ITLTVEASCH NGDETIETIE 101 150 ENSP00000239882/1-619 AAEALLNMDS PGPMLDEKRI NNNIFSSPED DMVVAPVTHV SVTLDGIPEV ENSBTAP00000009677/1-614 AAEALLNMDS PGPMLDEKRM NNSIFSSSED DMVVAPVTHV SVTLDGIPEV bmy_18479T0/1-560 ---------- ---------- DNNIFSSSED DIVVAPITHV SVTLDGIPEV BACU012157/1-614 AAEALLNMDS PGPMLDEKRI NNNIFSSSED DIVVAPITHV SVTLDGIPEV 151 200 ENSP00000239882/1-619 METQQVQEKY ADSPGASSPE QPKRKKGRKT KPPRPDSPAT TPNISVKKKN ENSBTAP00000009677/1-614 METQHVQETY AHSPGPSSPE QPKRKKGRKT KPPRPDSPTT TPNISVKKKN bmy_18479T0/1-560 METQHVQETY AXSPGRSSPE QPKRKKGRKT KPPRPDSPAT TPNISVRKKN BACU012157/1-614 METQHVQETY AHSPGRSSPE QPKRKKGRKT KPPRPDSPAS TPNISVRKKN 201 250 ENSP00000239882/1-619 KDGKGNTIYL WEFLLALLQD KATCPKYIKW TQREKGIFKL VDSKAVSRLW ENSBTAP00000009677/1-614 KDGKGNTIYL WEFLLALLQD KATCPKYIKW TQREKGIFKL VDSKAVSRLW bmy_18479T0/1-560 KDGKGNTIYL WEFLLALLQD KATCPKYIKW TQREKGIFKL VDSKAVSRLW BACU012157/1-614 RDGKGNTIYL WEFLLALLQD KATCPKYIKW TQREKGIFKL VDSKAVSRLW 251 300 ENSP00000239882/1-619 GKHKNKPDMN YETMGRALRY YYQRGILAKV EGQRLVYQFK EMPKDLIYIN ENSBTAP00000009677/1-614 GKHKNKPDMN YETMGRALRY YYQRGILAKV EGQRLVYQFK DMPKDLIYID bmy_18479T0/1-560 GKHKNKPDMN YETMGRALRY YYQRGILAKV EGQRLVYQFK DMPKDLIYID BACU012157/1-614 GKHKNKPDMN YETMGRALRY YYQRGILAKV EGQRLVYQFK DMPKDLIYID 301 350 ENSP00000239882/1-619 DEDPSSSIES SDPSLSSSAT SNRNQTSRSR VSSSPGVKGG ATTVLKPGNS ENSBTAP00000009677/1-614 DEDPSCSIES SDPSLSSTAT SSRNPASRSR ASSSPGIKGG ATTVLKPGNS bmy_18479T0/1-560 DEDPSSSIES SDPSLSSTTT SSRNQASRSR VSSGPGIKGG ATTVLKPGNS BACU012157/1-614 DEDPSSSIES SDPSLSSTAT SSRNQASRSR VSSGPGIKGG ATTVLKPGNS 351 400 ENSP00000239882/1-619 KAAKPKDPVE VAQPSEVLRT VQPTQSPYPT QLFRTVHVVQ PVQAVPEGEA ENSBTAP00000009677/1-614 KAAKPKDPME PVQPSEALRT VQSTQAPYPT QLFRTIHVVQ PVQAVPEAEA bmy_18479T0/1-560 KAAKPKDPVE PAQPSEVLRT MQSTQTPYPT QLFRTIHVVQ PVQAVPEGEA BACU012157/1-614 KAAKPKDPVE PAQPSEVLRT MQSTQTPYPT QLFRTIHVVQ PVQAVPEGEA 401 450 ENSP00000239882/1-619 ARTSTMQDET LNSSVQSIRT IQAPTQVPVV VSPRNQQLHT VTLQTVPLTT ENSBTAP00000009677/1-614 --ASSMPEET LNPSVPSIRT IQTPAQVPVV VSPGNQHLHT VTLQTVPITT bmy_18479T0/1-560 --TSSMQDET LNSSVQSIRT IQAPAQVPVV VSPGNQHLHT VTLQTVPITT BACU012157/1-614 --TSSMQDET LNSSVQSIRT IQAPAQVPVV VSPGNQHLHT VTLQTVPITT 451 500 ENSP00000239882/1-619 VIASTDPSAG TGSQKFILQA IPSSQPMTVL KENVMLQSQK AGSPPSIVLG ENSBTAP00000009677/1-614 VIASADPSSA AGSQKFILQA IPSSQPMTVL KENVVLQSQK PGSPPSIVLS bmy_18479T0/1-560 VIASTDPSSG AGSQKFILQA IPSSQPMTVL KENVVLQSQK PGSPPSIVLS BACU012157/1-614 VIASTDPSSG AGSQKFILQA IPSSQPMTVL KENVVLQSQK PGSPPSIVLS 501 550 ENSP00000239882/1-619 PAQVQQVLTS NVQTICNGTV SVASSPSFSA TAPVVTFSPR SSQLVAHPPG ENSBTAP00000009677/1-614 PAHVQQVLTS SVPTVCNGTV SAASAPSFSA TTPMVTFSHH SSQLVAHPPG bmy_18479T0/1-560 PAHVQQVLTS NVQSICNGTV SVASSPSFSA TTPVVTFSPR NSQLVTHPPG BACU012157/1-614 PAHVQQVLTS NVQSICNGTV SVASSPSFSA TTPVVTFSPR NSQLVTHPPG 551 600 ENSP00000239882/1-619 TVITSVIKTQ ETKTLTQEVE KKESEDHLKE NTEKTEQQPQ PYVMVVSSSN ENSBTAP00000009677/1-614 TVITSVIKAQ EAKTHIQEEV KKEVEDNEKQ GTEDAEQQLQ PYVMVV--SN bmy_18479T0/1-560 TVITSVIKAQ ETKTHIQEVE KKEVEDNLKE GTGETEQQSQ PYVMVV--SN BACU012157/1-614 TVITSVIKAQ ETKTHIQEAE KKEVEDNLKE GTGETEQQSQ PYVMVV--SN 601 650 ENSP00000239882/1-619 GFTSQVAMKQ NELLEPNSF ENSBTAP00000009677/1-614 GFPSQAAIK- NELLEPSSF bmy_18479T0/1-560 GFTSQVAIK- NELLEPNSF BACU012157/1-614 GFTSQVAIK- KELLEPNSF