KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:39:03 2014 Check: 00 .. Name: ENSBTAP00000009681/1-400 Len: 400 Check: 9702 Weight: 1.00 Name: ENSTTRP00000010616/1-396 Len: 400 Check: 2338 Weight: 1.00 Name: bmy_19600T0/1-353 Len: 400 Check: 8161 Weight: 1.00 Name: BACU019802/1-396 Len: 400 Check: 1202 Weight: 1.00 // 1 50 ENSBTAP00000009681/1-400 MAANYSSTSN KKDHVRITNK SQPGFLERLS ETSGGMFVGL MTFLVSFYLI ENSTTRP00000010616/1-396 ----YSSTSN RKEHVRITTK SQPGFLERLS ETSGGMFVGL MTFLLSFYLI bmy_19600T0/1-353 MAANYSSMSN RKEHVRITTK SQPGFLERLS ETSGGMFVGL MTFLLSFYLI BACU019802/1-396 ----YSSMSN RKEHVRTTTK SQPGFLERLS ETSGGMFVGL MTFLLSFYLI 51 100 ENSBTAP00000009681/1-400 FTNEGRALKT ATSLAEGLSL VVSPSSIHTV APENEGRLVH VIGALRTSKL ENSTTRP00000010616/1-396 FTNEGRTVKT ATLLAEGLSL VVTPDSIHSV APENEGRLVH IPGALRTSKL bmy_19600T0/1-353 FTNEGRTVKM ATLLAEGLSL VVTPDSIHSV APENEGRLVH IRGALRTSKL BACU019802/1-396 FTNEGRTVKM ASLLAEGLSL VVTPDSIHSV AAENEGRLVH IRGALRTSKL 101 150 ENSBTAP00000009681/1-400 LSDPNYGVHL PAVKLRRHVE MYQWVETEES REYTEDGQVK TERKYSYNTE ENSTTRP00000010616/1-396 LSDPNYGVYL PAVKLRRHVE MYQWVETEES REYTEDGQVK TERRYSYNTE bmy_19600T0/1-353 LSDPNYGVHL PAVKLRRHVE MYQWVETEES REYTEDGQVK TERRYSYS-- BACU019802/1-396 LSDPNYGVHL PAVKLRRHVE MYQWVETEES REYTEDGQVK TERRYSYNTE 151 200 ENSBTAP00000009681/1-400 WRSEIVNSRN FDREIGHKNP SAMAVESFTA TAPFVQIGRF FLSAGLIDKV ENSTTRP00000010616/1-396 WRSEIVNSRN FDREIGHKNP SAMAVESFTA TAPFVQIGRF FLSAGLIDKV bmy_19600T0/1-353 ---------- ---------- ---------- ---------- -----LIDKV BACU019802/1-396 WRSEIVNSRN FDREIGHKNP SAMAVESFTA AVPFVQIGRF FLSAGLIDKV 201 250 ENSBTAP00000009681/1-400 DNFKTLSLSK LEDPHVDIIR RGDYFYHSEN PKYPEVGDLR VSFSYAGLSS ENSTTRP00000010616/1-396 DNFKPLSLSK LEDPHVDIIR RGDYFYHSEN PKYPEVGDLR VSFSYAGLSG bmy_19600T0/1-353 DNFKPLSLSK LEDPHVDIIR RGDYFYHSEN PKYPEVGDLR VSFSYAGLSG BACU019802/1-396 DNFKPLSLSK LEDPHVDIIR RGDYFYHSEN PKYPEVGDLR VSFSYAGLSG 251 300 ENSBTAP00000009681/1-400 DDPDLGPAHV VTVIARQRGD QLVPYSTKSG DTLLLLHHGD FSAEEVFRRE ENSTTRP00000010616/1-396 DDPNLGPAHV VTVIARQRGD QLVPYSTKSG DTLLLLHHGD ISAEEVFRRE bmy_19600T0/1-353 DDPDLGPAHV VTVIAQQRGD HLVPYSXKSG DTLLLLHHGD VSAEEVFRRE BACU019802/1-396 DDPDLGPAHM VTVIAQQRGD HLVPYSTKSG DTLLLLHHGD VSAEEVFRRE 301 350 ENSBTAP00000009681/1-400 QKSNSLKTWG LRAAGWAAMF MGLNLMTRIL YTLVDWFPVF RDLVNIGVKA ENSTTRP00000010616/1-396 QKSNSMKTWG LRAAGWVAMF VGLNLMTRIL YTLVDWFPIF RDLVNIGLKA bmy_19600T0/1-353 QKSNSMKTWG LRAAGWVAMF VGLNLMTRIL YTLVDWFPIF RDLVNIGLKA BACU019802/1-396 QKSNSMKTWG LRAAGWVAMF VGLNLMTRIL YTLVDWFPVF RDLVNIGLKA 351 400 ENSBTAP00000009681/1-400 FAFCVATSLT LLTVAAGWLF YRPLWALGIA GLALVPIIIA RTRVPAKKLE ENSTTRP00000010616/1-396 FALCVATSLT LLTVAAGWLF HRPLWALVIS CLALVPIIIA RTRVPAKKLE bmy_19600T0/1-353 FAFCVATSLT LLTVAAGWLF YRPLWALVIS CLALVPIIIA RTRVPAKKLE BACU019802/1-396 FAFCVATSLT LLTVAAGWLF YRPLWALVIS CLALVPIIIA RTRVPAKKLE