KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:06 2014 Check: 00 .. Name: ENSP00000386502/1-418 Len: 424 Check: 8383 Weight: 1.00 Name: ENSBTAP00000009694/1-424 Len: 424 Check: 9557 Weight: 1.00 Name: ENSTTRP00000004996/1-338 Len: 424 Check: 4477 Weight: 1.00 Name: bmy_20984T0/1-418 Len: 424 Check: 7173 Weight: 1.00 Name: BACU018998/1-342 Len: 424 Check: 3544 Weight: 1.00 // 1 50 ENSP00000386502/1-418 MGNITRKGSR DLVVDSAKSL EDGPSAALHS KLYEAIMRED CTTIEVLLRN ENSBTAP00000009694/1-424 MGNITKRGSK GRAADGPKAL EGSTAATLHV QLCEAIMRQD CAALRALLRS ENSTTRP00000004996/1-338 ---------- ---------- ---------- ---------- ---------- bmy_20984T0/1-418 MGDITKRGSR GLVADGAQAL EEGAVVSXHT RLYEAIQRED CTALWALLRS BACU018998/1-342 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000386502/1-418 HPVNQPITIL PNSA-----S NRLLLTQPTE SIIPIHLAAK YHKAQSLLCL ENSBTAP00000009694/1-424 HPVNQPMTIL TSSTGCSLAN SRLFLSQETL SFLPIHLAAK YRKAQSLLCL ENSTTRP00000004996/1-338 ---------- ---------- -------QTQ SIIPI-LAAE YRKAQSLLCL bmy_20984T0/1-418 QPVNEPMTVL ASST-----S YRLLLSQQTQ SIIPIYLAAE YRKAQSLLCL BACU018998/1-342 ---------- ---------- MYFFPPKQTQ SIIPIYLAAE NRKAQSLLCL 101 150 ENSP00000386502/1-418 LRHGADPEVR DTTGLTTLNL MLLHWPVTST TWAKPGNRTH RILTDIQNSS ENSBTAP00000009694/1-424 LEHGADPEAR DTQGFTTLHL MLLNWPITST TWTKPRNKIQ TMLTDVQRNA ENSTTRP00000004996/1-338 LEHEVDPEVR DTRGLTTRHL MLLHWPITSA MRTKPGNRIQ RVLTDIQNNT bmy_20984T0/1-418 LEYGADPEVR DTRGLTTLHL MLLHWPITST TWTKPGNRIQ RMLTDIQNDA BACU018998/1-342 LEHSADPELR DTRGLTTLRL MLLHWPITST TWTKPGNRIQ RMLTDIQNDA 151 200 ENSP00000386502/1-418 ITCLRILCAH GAQVNTQGEI SNKRSPLHLA IAYGCYPVLS ILTQNGADVN ENSBTAP00000009694/1-424 VLCLRILCAH GAQVNARVDS GHRHCPLHLA TIYGTHLVLS ILAQNGAQVN ENSTTRP00000004996/1-338 VLCLRILCEH GAQVNARADS SNGHSRLRLA ITYGTYPVLS ILAHNGAQVN bmy_20984T0/1-418 VLCLHILCER GAQVNARV-A DNWRSPLHLA ITYGTSPVLS ILAQNGAQVN BACU018998/1-342 VLCLRILCEH GAQVNARV-A DNWRSPLHLA ITYGTSPVLS ILAQNGAQVN 201 250 ENSP00000386502/1-418 AINEASMTPL HMAANMLNKE MMETLIAYGA NVNCAVSSTG NTPLKLAVCT ENSBTAP00000009694/1-424 AQNGSSMTPL HMAADILNKE MMQTLIAWGA SVNCAVSSTG NTALKLAVST ENSTTRP00000004996/1-338 AINESSMTPL HMAADILNKQ VIETLTAHGA NVNCAVSSTG NTALKLAVCT bmy_20984T0/1-418 AMNESSMTPL HVAADILNKE MMETLTAHGA NVNCAISSTG NTALKLAVCT BACU018998/1-342 AMNESSMTPL HVAADILNKE MMEMLTAHGA NVNCAVSSTG NTALKLAVCT 251 300 ENSP00000386502/1-418 ASSKAGRLLG AGVSCIRLLL THGAKVNAQD YKGQTAIHEA CFGGREAIIN ENSBTAP00000009694/1-424 ASSKAGRLLA AGLGCIRLLL VHGAQVNARD HDGQAAIHEA CFGGREVIIN ENSTTRP00000004996/1-338 TSSN-GRLLA AGLSCIRLLL VHGAQVNTQD REGQAASHE- CFGGREA--N bmy_20984T0/1-418 TSSKAGRLLA AGLSCTCLLL VHGAQVNTQD HEGQAAIHEA CFGGREAIIN BACU018998/1-342 ASSKAGR--- -------LLL VYGAQVNTQD HEGQAAIHEA CFGGREAIIN 301 350 ENSP00000386502/1-418 LLLEFEANVN ILTRNGESPI YMYLQRSCNV RDTALLARLL YHTYPLRMTN ENSBTAP00000009694/1-424 LLLEFEANVN ILTRNGESPI HMYLQRGSNI RDTALLARLL FRSYPLRLTN ENSTTRP00000004996/1-338 LLLEFEANVN ILTRNGESLI YMYLQRGSNI RDAALLTRLL YHSYPLRLTN bmy_20984T0/1-418 LLLEFEANVN ILTRNGESPI YMYLQRGSNI RDTALLTRLL YHSYPLRLTN BACU018998/1-342 LLLEFEANVN ILTRNGDSPM YMYLLRGSNI RDTALLTRLL YHL-PLRLTN 351 400 ENSP00000386502/1-418 NQGILPAGIM LPEFRLLRDT LIKQSQKPLS LQGICKRNIR NIYGEKYKQH ENSBTAP00000009694/1-424 NQGKLPAGIL LPEFHLLRET LLKLSQKPLS LEDICKRNVR NIYGEKHKQL ENSTTRP00000004996/1-338 DQGILPAGIM LPEFHLLRET VIKLSQKPLS LEDNCKRNVR NICGEKQKQH bmy_20984T0/1-418 NQGILPAGIM LPEFHLLRET SIKLSQKPLS LEDNCKRNVR NMYGEKYKQH BACU018998/1-342 NQGILPAGIM LPEFHLLRET PIKLSQKPLS LEDNCKRNVR NIYGEKYKQH 401 450 ENSP00000386502/1-418 LKQFLPVTIW NSVYCCYDLA YTS- ENSBTAP00000009694/1-424 LKRLLPGKIW NSVYGYHDLA HLLK ENSTTRP00000004996/1-338 LKRLLPAKIW NSVSGYYGLT ---- bmy_20984T0/1-418 LKRLLPGKIW NSVYGYYDLA HLLK BACU018998/1-342 LKRLLPGKIW NSVYGYYDLA YLLK