KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:08 2014 Check: 00 .. Name: BACU012127/1-505 Len: 526 Check: 7258 Weight: 1.00 Name: ENSTTRP00000006882/1-296 Len: 526 Check: 68 Weight: 1.00 Name: ENSBTAP00000009708/1-402 Len: 526 Check: 1491 Weight: 1.00 Name: bmy_20988T0/1-372 Len: 526 Check: 257 Weight: 1.00 Name: ENSP00000297044/1-399 Len: 526 Check: 6427 Weight: 1.00 // 1 50 BACU012127/1-505 MGPPETWNQN TCLLEVLVTA TRAPASRPCD DCLLRPEAAG CLGKRRQWSL ENSTTRP00000006882/1-296 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009708/1-402 ---------- ---------- ---------- ---------- ---------- bmy_20988T0/1-372 ---------- ---------- ---------- ---------- ---------- ENSP00000297044/1-399 ---------- ---------- ---------- ---------- ---------- 51 100 BACU012127/1-505 AENVVPGARG PSGHGEGRVC AEVQKRGKEP AEELYRAAST GEGAAPQARP ENSTTRP00000006882/1-296 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009708/1-402 ---------- ---------- ---------- ---------- ---------- bmy_20988T0/1-372 ---------- ---------- ---------- ---------- ---------- ENSP00000297044/1-399 ---------- ---------- ---------- ---------- ---------- 101 150 BACU012127/1-505 ELTYGFSKPV IKTFLSPQLN DAFKGKVFDV PEDLSLEERE ELLDIRRRKK ENSTTRP00000006882/1-296 ---------- ---------- ---------- PEDLSLEERE ELLDIRRRKK ENSBTAP00000009708/1-402 ---------- -------LCE GLGSAIGISV PEDLSLEERE ELLDIRRRKK bmy_20988T0/1-372 ---------- ---------- ---------- ---------- ---MPRPRRS ENSP00000297044/1-399 ---------- --------MD EDGGGEGGGV PEDLSLEERE ELLDIRRRKK 151 200 BACU012127/1-505 ELIDDIERLK YEIAEVMTEI DNLTSVEESK TTQRNKQIAM GRKKFNMDPK ENSTTRP00000006882/1-296 ELIDDIERLK YEIAEVMTEI DNLTSVEESK TTQRNKQIAM GRKKFNMDPK ENSBTAP00000009708/1-402 ELIDDIERLK YEIAEVMTEI DNLTSVEESK TTQRNKQVAM GRKKFNMDPR bmy_20988T0/1-372 ELSQ--PRLK YEIAEVMTEI DNLTSVEESK TTQRNKQIAM GRKKFNMDPK ENSP00000297044/1-399 ELIDDIERLK YEIAEVMTEI DNLTSVEESK TTQRNKQIAM GRKKFNMDPK 201 250 BACU012127/1-505 KGIQFLIEND LLQCSPEDVA QFLYKGEGLN KTVIGDYLGE RDEFNIKVLQ ENSTTRP00000006882/1-296 KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XDEFNIKVLQ ENSBTAP00000009708/1-402 KGIQFLIEND LLQSSPEDVA QFLYKGEGLN KTVIGDYLGE RDEFNIKVLQ bmy_20988T0/1-372 KGIQFLIEND LLQCSPEDVA QFLYKGEGLN KTVIGDYLGE RDEFNIKVLQ ENSP00000297044/1-399 KGIQFLIEND LLQSSPEDVA QFLYKGEGLN KTVIGDYLGE RDEFNIKVLQ 251 300 BACU012127/1-505 AFVELHEFAD LNLVQALSVP DGLGWSWSGP SPPCSA---- ---PARACFL ENSTTRP00000006882/1-296 AFVELHEFAD LNLVQALR-- -QFLWSFRLP GEAQKIDRMM EAFAARYCL- ENSBTAP00000009708/1-402 AFVELHEFAD LNLVQALR-- -QFLWSFRLP GEAQKIDRMM EAFAARYCL- bmy_20988T0/1-372 AFVELHEFAD LNLVQALR-- -QFLWSFRLP GEAQKIDRMM EAFAARYCL- ENSP00000297044/1-399 AFVELHEFAD LNLVQALR-- -QFLWSFRLP GEAQKIDRMM EAFASRYCL- 301 350 BACU012127/1-505 VAVPPPV--D QDTCYVLSFA IIMLNTSLHN HNVRDKPTAE RFVTMNRGIN ENSTTRP00000006882/1-296 --CNPGVFQS TDTCYVLSFA IIMLNTSLHN HNVRDKPTAE RFVTMNRGIN ENSBTAP00000009708/1-402 --CNPGVFQS TDTCYVLSFA IIMLNTSLHN HNVRDKPTAE RFVTMNRGIN bmy_20988T0/1-372 --CNPGVFQS TDTCYVLSFA IIMLNTSLHN HNVRDKPTAE RFVTMNRGIN ENSP00000297044/1-399 --CNPGVFQS TDTCYVLSFA IIMLNTSLHN HNVRDKPTAE RFIAMNRGIN 351 400 BACU012127/1-505 EGGDLPEELL R--NLYESIK NEPFKIPEDD GNDLTHTFFN PDREGWLLKL ENSTTRP00000006882/1-296 EGGDLPEELL R--NLYESIK NEPFKIPEDD GNDLTHTFFN PDREGWLLKL ENSBTAP00000009708/1-402 EGGDLPEELL RAAGVYKEKR AASIHSSQEQ PGSFLQGACS AQTHGVPLLL bmy_20988T0/1-372 EGGDLPEELL R--NLYESIK NEPFKIPEDD GNDLTHTFFN PDREGWLLKL ENSP00000297044/1-399 EGGDLPEELL R--NLYESIK NEPFKIPEDD GNDLTHTFFN PDREGWLLKL 401 450 BACU012127/1-505 -GGRVKTWKR RWFILTDNCL YYFEYTTDKE PRGIIPLENL SIREVEDPRK ENSTTRP00000006882/1-296 GGGRVKTWKR RWFILTDNCL YYFEYTTDKE PRGI------ ---------- ENSBTAP00000009708/1-402 -GGRVKTWKR RWFILTDNCL YYFEYTTDKE PRGIIPLENL SIREVEDPRK bmy_20988T0/1-372 -GGRVKTWKR RWFILTDNCL YYFEYTTDKE PRGIIPLENL SIREVEDPRK ENSP00000297044/1-399 -GGRVKTWKR RWFILTDNCL YYFEYTTDKE PRGIIPLENL SIREVEDPRK 451 500 BACU012127/1-505 P-------VG PRAFCLSGLP QGGDGRSERK ETHTWKKSVP LAICEGALPD ENSTTRP00000006882/1-296 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009708/1-402 PNCFELYNPS HKGQVIKACK TEADGRVVEG NHVVYRISAP SPEEKEEWMK bmy_20988T0/1-372 PNCFELYNPS HKGQVIKACK TEADGRVVEG NHVVYRISAP SPEEKEEWMK ENSP00000297044/1-399 PNCFELYNPS HKGQVIKACK TEADGRVVEG NHVVYRISAP SPEEKEEWMK 501 550 BACU012127/1-505 GYLPGIMQKA MVLRICVTCP RSVT-- ENSTTRP00000006882/1-296 ---------- ---------- ------ ENSBTAP00000009708/1-402 SIRASISRDP FYDMLATRKR RIANKK bmy_20988T0/1-372 SIRASISRDP FYDMLATRKR RIANKK ENSP00000297044/1-399 SIKASISRDP FYDMLATRKR RIANKK