KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:08 2014 Check: 00 .. Name: bmy_16581T0/1-338 Len: 586 Check: 1867 Weight: 1.00 Name: ENSBTAP00000009711/1-583 Len: 586 Check: 5467 Weight: 1.00 Name: ENSP00000239690/1-583 Len: 586 Check: 1657 Weight: 1.00 Name: BACU013178/1-583 Len: 586 Check: 5384 Weight: 1.00 Name: ENSTTRP00000001641/1-582 Len: 586 Check: 2006 Weight: 1.00 // 1 50 bmy_16581T0/1-338 ---MENFTSK RRALFLQKQN TTANF----- ---------- FNELRKKRQE ENSBTAP00000009711/1-583 MEVAANCSLR VKRPLLDPRF ESYKLSLEPL PSYQLELDAA VAEVKLRDDQ ENSP00000239690/1-583 MEVAANCSLR VKRPLLDPRF EGYKLSLEPL PCYQLELDAA VAEVKLRDDQ BACU013178/1-583 MEVAANCSLR VKRPLLDPRF EGYKLSLEPL PCYQLELDAA VAEVKLRDDQ ENSTTRP00000001641/1-582 MEVAANCSLR VKRPLLDPRF EGYKLSLEPL PCYQLELD-A VAEVKLRDDQ 51 100 bmy_16581T0/1-338 TILE------ ----MFKDKS KLSKIVIRVN LGG----TPM YRRQGWEPR- ENSBTAP00000009711/1-583 YTLEHMHAFG MYNYLHCDPW YQDSVYYIDN LGRIMNLTVM LDTALGKPRE ENSP00000239690/1-583 YTLEHMHAFG MYNYLHCDSW YQDSVYYIDT LGRIMNLTVM LDTALGKPRE BACU013178/1-583 YTLEHMHAFG MYNYLHCDSW YQDSVYYVDN LGRIMNLTVM LDTALGKPRE ENSTTRP00000001641/1-582 YTLEHMHAFG MYNYLHCDSW YQDSVYYVDN LGRIMNLTVM LDTALGKPRE 101 150 bmy_16581T0/1-338 --RLPATVIR V-KRGPFNTN FINSHVRTLE GDGDGTGRLY LIGTGECGNS ENSBTAP00000009711/1-583 VFRLPTDLTA CDNRLCASIH FTSSTWVTL- --SDGTGRLY LIGTGERGNS ENSP00000239690/1-583 VFRLPTDLTA CDNRLCASIH FSSSTWVTL- --SDGTGRLY VIGTGERGNS BACU013178/1-583 VFRLPTDLIA YDDRLCASIH FTSSTWVTL- --SDGTGRLY LIGTGERGNS ENSTTRP00000001641/1-582 VFRLPTDLIA YDNRLCASMH FTSSTWVTL- --SDGTGRLY LIGTGERGNS 151 200 bmy_16581T0/1-338 ASEKWEIMFN EELGSPFIII HIISLLKAEE HSITMLLLRT EKEELVMEGS ENSBTAP00000009711/1-583 VSEKWEIVFN EELGNPFIII HSISLLKAEE HSIATLLLRI EKEELSMKGS ENSP00000239690/1-583 ASEKWEIMFN EELGDPFIII HSISLLNAEE HSIATLLLRI EKEELDMKGS BACU013178/1-583 ASEKWEIMFN EELGNPFIII HSISLLKAEE HSIATLLLRI EREELDMKGS ENSTTRP00000001641/1-582 ASEKWEIMFN EELGNPFIII HSISLLKAEE HSIATLLLRI EKEELDXXXX 201 250 bmy_16581T0/1-338 GFYVSLEWVT INKKNKDNKK YEITKHNILR GKSVPPYVAF EPDGNGLMIV ENSBTAP00000009711/1-583 GFYVSLEWVT ISKKYEDNKK YEVAKRNTLR GKSVPHYAAI EPDGNGLMII ENSP00000239690/1-583 GFYVSLEWVT ISKKNQDNKK YEIIKRDILR GKSVPHYAAI EPDGNGLMIV BACU013178/1-583 GFYVSLEWVT INKKNKDKRK YEITKRNILH GKSVPHYAAI EPDGNGLMIV ENSTTRP00000001641/1-582 XXXXXXXXXX XXXXXXXKKK YEITKRNILR GKSVPHYAAI EPNGNGLMIV 251 300 bmy_16581T0/1-338 S--------I GQDLEESKDE DMSEKIKEPL YYWQQTEDDL TVTIPLPEDC ENSBTAP00000009711/1-583 SYKPFTFVQA GQGLEESKDE NMSEEIKEPL YYWQQTEDDL TVTIQLPEDC ENSP00000239690/1-583 SYKSLTFVQA GQDLEENMDE DISEKIKEPL YYWQQTEDDL TVTIRLPEDS BACU013178/1-583 SYKSFTFVQV GQNLEESKDE DMSEKIKEPL YYWQQTEDDL TITVSLPEDC ENSTTRP00000001641/1-582 SYKSFTFVQV GQNLEESKDE DMSEKIKEPL YYWQQTEDDL TVTISLPEDC 301 350 bmy_16581T0/1-338 TKEDIQIQFL PDHVNVVLKG QRFLEGNLYS SMDHESSIWI IKENNSLEIS ENSBTAP00000009711/1-583 TKEDIQVQFL PDSVNIVLKG QRFLEGNLFS SIDHESSTWI IKENNSLEIS ENSP00000239690/1-583 TKEDIQIQFL PDHINIVLKD HQFLEGKLYS SIDHESSTWI IKESNSLEIS BACU013178/1-583 TKEDIQIQFL PDHVNVVLKG QRFLEGNLYS SIDHESSTWI IKENNSLEIS ENSTTRP00000001641/1-582 TKEDIQIQFL PDHVNVVLKG QRFLEGNLYS SIDHESSTWI IKENNSLEIS 351 400 bmy_16581T0/1-338 LIKKNEGLTW PELVVGDKRG IYKRLSSMC- ---------- ---------- ENSBTAP00000009711/1-583 LIKKSEGMTW PELVVGDKQG EFIRDSAQCA AIAERLMHLT SDELNPNPDK ENSP00000239690/1-583 LIKKNEGLTW PELVIGDKQG ELIRDSAQCA AIAERLMHLT SEELNPNPDK BACU013178/1-583 LIKKNEGLTW PELVVGDKQG EFIRDSAQCA AIAERLMHLT SDELNPNPDK ENSTTRP00000001641/1-582 LIKKNEGLTW PELVVGDKQG EFIRDSAQCA AIAERLMHLT SDELNPNPDK 401 450 bmy_16581T0/1-338 ----CHS--- ---------- ---------- ---------- ---------- ENSBTAP00000009711/1-583 DKPPCNAQEL EECDIFFEEN FSLCRFDGNT LKTTHVVNLG SNQYLFSVIV ENSP00000239690/1-583 EKPPCNAQEL EECDIFFEES SSLCRFDGNT LKTTHVVNLG SNQYLFSVIV BACU013178/1-583 GKPPCNAQEL EECDIFFEES SSLCRFDGST LKTTHVVNLG SNQYLFSVIV ENSTTRP00000001641/1-582 GKPPCNAQEL EECDIFFEES SSLCRFDGST LKTTHVVNLG SNQYLFSVIV 451 500 bmy_16581T0/1-338 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009711/1-583 DPKEMPCFCL RHDVDALLWQ PRSSKQDDMW EHIATFNALG YVQASKRDKK ENSP00000239690/1-583 DPKEMPCFCL RHDVDALLWQ PHSSKQDDMW EHIATFNALG YVQASKRDKK BACU013178/1-583 DPKERPCFCL RHDVDALLWQ PHSSNQDDMW EHIATFNALG YVQASKRDKK ENSTTRP00000001641/1-582 DPKEMPCFCL RHDVDALLWQ PHSGNQDDMW EHIATFNALG YVQASKRDKK 501 550 bmy_16581T0/1-338 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009711/1-583 FFACAPNYSY AALCECLRRV FIYRQPTPMS TVLYNRKEGR QVGQVAKQQV ENSP00000239690/1-583 FFACAPNYSY AALCECLRRV FIYRQPAPMS TVLYNRKEGR QVGQVAKQQV BACU013178/1-583 FFACAPNYSY AALCECLQRV FNYRQPTPMS TVLYNRKEGR QVGQVAKQQV ENSTTRP00000001641/1-582 FFACAPNYSY AALCECLRRV FIYRQPTPMS TVLYNRKEGR QVGQVAKQQV 551 600 bmy_16581T0/1-338 ---------- ---------- ---------- ------ ENSBTAP00000009711/1-583 ASLETNDPIL GFQATNERLF VLTTKNLFLI KVNTEN ENSP00000239690/1-583 ASLETNDPIL GFQATNERLF VLTTKNLFLI KVNTEN BACU013178/1-583 ASLETSDPIL GFQATNERLF VLTTKNLFLI KVNTEN ENSTTRP00000001641/1-582 ASLETSDPIL GFQATNERLF VLTTKNLFLI KVNTEN