KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:09 2014 Check: 00 .. Name: ENSP00000347872/1-393 Len: 413 Check: 4304 Weight: 1.00 Name: ENSBTAP00000009715/1-402 Len: 413 Check: 845 Weight: 1.00 Name: ENSTTRP00000011137/1-392 Len: 413 Check: 451 Weight: 1.00 Name: bmy_21171T0/1-376 Len: 413 Check: 9282 Weight: 1.00 Name: BACU007111/1-410 Len: 413 Check: 4941 Weight: 1.00 // 1 50 ENSP00000347872/1-393 MSDEREVAEA AT-------- -GEDASSPPP KTE-AASDPQ HPAASEGAAA ENSBTAP00000009715/1-402 MSAEREVAEA ATVVAAAEAG AGEDASSQPP KAE-AASDAQ PSAASEGPAA ENSTTRP00000011137/1-392 MSAEREVAEA AT-------- -GEDASSQLP KAEEAAGDAQ PPAASEGPVA bmy_21171T0/1-376 MSAEREVAEA ATVVAAAEAG AGEDASSQLP KAE-AAGDAQ PPAASEGPVA BACU007111/1-410 MSAEREVAEA ATVVAAVEAG AGEDASSQLP KAE-AAGDAQ PPAASEGPVA 51 100 ENSP00000347872/1-393 AAASPPLLRC LVLTGFGGYD KVKLQSRPAA PPAPGPGQLT LRLRACG--- ENSBTAP00000009715/1-402 PSPPPPLLRC LVLTGFGGYD KVKLQTRPAA PPAPGTGQLT LRVKACG--- ENSTTRP00000011137/1-392 PSPPP--LRC LVLTGFGGYD KVKLQTRPAA PPAPGTGQLT LRVKACG--- bmy_21171T0/1-376 PSPPP--LRC LVLTGFGGYD KVKLQTRPAA PPAPGTGQLT LRVKACG--- BACU007111/1-410 PSPPP--LRC LVLTGFGGYD KVKLQTRPAA PPAPGTGQLT LRVKACGLNF 101 150 ENSP00000347872/1-393 -------LNF ADLMARQGLY DRLPPLPVTP GMEGAGVVIA VGEGVSDRKA ENSBTAP00000009715/1-402 -------LNF ADLMARQGLY DRLPQLPVTP GMEGAGVVIA VGEGVNDRKI ENSTTRP00000011137/1-392 -------LNF ADLMARQGLY DRLPPLPLTP GMEGAGVVIA VGEGVNDRKV bmy_21171T0/1-376 -------LNF ADLMARLGLY DRLPPLPLTP GMEGAGVVIA VGEGVNDRK- BACU007111/1-410 ADLKPCALNF ADLMARQGLY DRLPPLPLTP GMEGAGVVIA VGEGVNDRKV 151 200 ENSP00000347872/1-393 GDRVMVLNRS GMWQEEVTVP SVQTFLIPEA MTFEEAAALL VNYITAYMVL ENSBTAP00000009715/1-402 GDRVMVLIRS GMWQEEVTVP SAQTFLMPEA MTFEEAAALL VNYITAYMVL ENSTTRP00000011137/1-392 GDRVMVLIRS GMWQEEVTVP SAQTFLMPEA MTFEEAAALL VNYITAYMVL bmy_21171T0/1-376 ---------- ---------- ---TFLMPEA MTFEEAAALL VNYITAYLVL BACU007111/1-410 GDRVMVLIRS GMWQEEVTVP SAQTFLMPEA MTFEEAAALL VNYITAYLVL 201 250 ENSP00000347872/1-393 FDFGNLQPGH SVLVHMAAGG VGMAAVQLCR TVENVTVFGT ASASKHEALK ENSBTAP00000009715/1-402 FDFGNLRPGH SVLVHMAAGG VGMAALQLCR TVENVTVFGT ASASKHEVLK ENSTTRP00000011137/1-392 FDFGNLRPGH SVLVHMAAGG VGMAAVQLCR TVENVMVFGT ASAGKHEVLK bmy_21171T0/1-376 FDFGNLRPGH SVLVHMAAGG VGMAAVQLCR TVENVTVFGT ASASKHEVLK BACU007111/1-410 FDFGNLRPGH SVLVHMAAGG VGMAAVQLCR TVENVTVFGT ASASKHEVLK 251 300 ENSP00000347872/1-393 ENGVTHPIDY HTTDYVDEIK KISPKGVDIV MDPLGGSDTA KGYNLLKPMG ENSBTAP00000009715/1-402 ENGVTHPIDY HTTDYVDEIK KISPKGVDIV MDPLGGSDTA KGYNLLKPMG ENSTTRP00000011137/1-392 ESGVTHPIDY HTTDYVEEIK KISPKGVDIV LDPLGGSDTA KGYNLLKPMG bmy_21171T0/1-376 ESGVTHPIDY HTTDYVEEIK KISPKGVDIV LDPLGGSDTA KCYNLLKPMG BACU007111/1-410 ENGVTHPIDY HTTDYIEEIK KISPKGVDIV LDPLGGSDTA KGYNLLKPMG 301 350 ENSP00000347872/1-393 KVVTYGMANL LTGPKRNLMA LARTWWNQFS VTALQLLQAN RAVCGFHLGY ENSBTAP00000009715/1-402 KVVTYGMANL LTGPKRNLMA LARTWWNQFS VTALQLLPAN RAVCGFHLGY ENSTTRP00000011137/1-392 KVVTYGMANL LTGPKRNLMA VARTWWNQFS VTALQLLPAN RAVCGFHLGY bmy_21171T0/1-376 KVVTYGMANL LTGPKRNLMA VARTWWNQFS VTALQLLPTN RAVCGFHLGY BACU007111/1-410 KVVTYGMANL LTGPKRNLMA VARTWWNQFS VTALQLLPAN RAVCGFHLGY 351 400 ENSP00000347872/1-393 LDGEVELVSG VVARLLALYN QGHIKPHIDS VWPFEKVADA MKQMQEKKNV ENSBTAP00000009715/1-402 LEGEVELVSG VVTRLLALYN QGHIKPRIDS VWPFEKVADA MRQMQEKKNV ENSTTRP00000011137/1-392 LEGETELVSG VVARLVALYN QGHIKPHIDS VWPFEKVADA MRQMQEKRNV bmy_21171T0/1-376 LEGEVELVSG VVTRLVALYN QGHIKPHIDS VWPFEKVADA MRQMQEKRNV BACU007111/1-410 LEGEVELVSG VVTRLVALYN QGHIKPHIDS VWPFEKVVDA MRQMQEKRNV 401 450 ENSP00000347872/1-393 GKVLLVPGPE KEN ENSBTAP00000009715/1-402 GKVLLVPGPE KEN ENSTTRP00000011137/1-392 GKVLLVPGPE KEN bmy_21171T0/1-376 GKVLLVPGPE KEN BACU007111/1-410 GKVLLVPGPE KEN