KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:12 2014 Check: 00 .. Name: ENSTTRP00000005900/1-741 Len: 744 Check: 3552 Weight: 1.00 Name: ENSP00000238714/1-736 Len: 744 Check: 562 Weight: 1.00 Name: ENSBTAP00000009749/1-740 Len: 744 Check: 5050 Weight: 1.00 Name: BACU013702/1-618 Len: 744 Check: 2966 Weight: 1.00 Name: bmy_03008T0/1-687 Len: 744 Check: 9212 Weight: 1.00 // 1 50 ENSTTRP00000005900/1-741 MKEMSANTVL ---ESQRQQK HYGITSPISL ACPKEIDHIY TQKLIDAMKP ENSP00000238714/1-736 MKEMSANTVL ---DSQRQQK HYGITSPISL ASPKEIDHIY TQKLIDAMKP ENSBTAP00000009749/1-740 MKEMSANTML ---DSQRQQK HYGITSPISL ACPKEIDHIY TQKLIDAMKP BACU013702/1-618 -FFLNRNTML ---DSQRQQK HYGITSPISL ACPKEIDHIY TQKLIDAMKP bmy_03008T0/1-687 MKEMSALVVL GKLNNLVKEW ISEVSESKNL P-P------- ---------- 51 100 ENSTTRP00000005900/1-741 FGVFEDEEEL NHRLVVLGKL NNLVKEWISE VSESKNLPPS VVATVGGKIF ENSP00000238714/1-736 FGVFEDEEEL NHRLVVLGKL NNLVKEWISD VSESKNLPPS VVATVGGKIF ENSBTAP00000009749/1-740 FGVFEDEEEL NHRLVVLGKL NNLVKEWISE VSESKNLPPS VVATVGGKIF BACU013702/1-618 FGVFEDEEEL NHR------- ---------- ---------- ---------- bmy_03008T0/1-687 ---------- ---------- ---------- ---------S VVATVGGKIF 101 150 ENSTTRP00000005900/1-741 TFGSYRLGVH TKGADIDALC VAPRHVERSD FFQSFFEKLK HQDGIRNLRA ENSP00000238714/1-736 TFGSYRLGVH TKGADIDALC VAPRHVERSD FFQSFFEKLK HQDGIRNLRA ENSBTAP00000009749/1-740 TFGSYRLGVH TKGADIDALC VAPRHVERSD FFQSFFEKLK HQDGIRNLRA BACU013702/1-618 ---------- ---------L VVLGKL--NN LVKEWISEVS ES------KA bmy_03008T0/1-687 TFGSYRLGVH TKGADIDALC VAPRHVERSD FFQSFFEKLK HQDGIRNLRA 151 200 ENSTTRP00000005900/1-741 VEDAFVPVIK FEFDGIEIDL VFARLSIQTI SDNLDLRDDS RLRSLDIRCI ENSP00000238714/1-736 VEDAFVPVIK FEFDGIEIDL VFARLAIQTI SDNLDLRDDS RLRSLDIRCI ENSBTAP00000009749/1-740 VEDAFVPVIK FEFDGIEIDL VFARLAIQTI SENLDLRDDS RLRSLDIRCI BACU013702/1-618 VEDAFVPVIK FEFDGIEIDL VFARLAIQTI SDNLDLRDDS RLRSLDIRCI bmy_03008T0/1-687 VEDAFVPVIK FEFDGIEIDL VFARLAIQTI SDNLDLRDDS RLRSLDIRCI 201 250 ENSTTRP00000005900/1-741 RSLNGCRVTD EILHLVPNKE TFRLTLRAVK LWAKRRGIYS NMLGFLGGVS ENSP00000238714/1-736 RSLNGCRVTD EILHLVPNKE TFRLTLRAVK LWAKRRGIYS NMLGFLGGVS ENSBTAP00000009749/1-740 RSLNGCRVTD EILHLVPNKE TFRLTLRAVK LWAKRRGIYS NMLGFLGGVS BACU013702/1-618 RSLNGCRVTD EILHLVPNKE TFRLTLRAVK LWAKRRGIYS NMLGFLGGVS bmy_03008T0/1-687 RSLNGCRVTD EILHLVPNKE TFRLTLRAVK LWAKRRGIYS NMLGFLGGVS 251 300 ENSTTRP00000005900/1-741 WAMLVARTCQ LYPNAAASTL VHKFFLVFSK WEWPNPVLLK QPEESNLNLP ENSP00000238714/1-736 WAMLVARTCQ LYPNAAASTL VHKFFLVFSK WEWPNPVLLK QPEESNLNLP ENSBTAP00000009749/1-740 WAMLVARTCQ LYPNAAASTL VHKFFLVFSK WEWPNPVLLK QPEESNLNLP BACU013702/1-618 WAMLVARTCQ LYPNAAASTL VHKFFLVFSK WEWPNPVLLK QPEESNLNLP bmy_03008T0/1-687 WAMLVARTCQ LYPNAAASTL VHKFFLVFSK WEWPNPVLLK QPEESNLNLP 301 350 ENSTTRP00000005900/1-741 VWDPRVNPSD RYHLMPIITP AYPQQNSTYN VSTSTRTVMV EEFKQGLAVT ENSP00000238714/1-736 VWDPRVNPSD RYHLMPIITP AYPQQNSTYN VSTSTRTVMV EEFKQGLAVT ENSBTAP00000009749/1-740 VWDPRVNPSD RYHLMPIITP AYPQQNSTYN VSTSTRTVMV EEFKQGLAVT BACU013702/1-618 VWDPRVNPSD RYHLMPIITP AYPQQNSTYN VSTSTRTVMV EEFKQGLAVT bmy_03008T0/1-687 VWDPRVNPSD RYHLMPIITP AYPQQNSTYN VSTSTRTVMV EEFKQGLAVT 351 400 ENSTTRP00000005900/1-741 DEILQGKSDW SKLLEPPNFF QKYRHYIVLT ASASTEENHL EWVGLVESKI ENSP00000238714/1-736 DEILQGKSDW SKLLEPPNFF QKYRHYIVLT ASASTEENHL EWVGLVESKI ENSBTAP00000009749/1-740 DEILQGKSDW SKLLEPPNFF QKYRHYIVLT ASASTEENHL EWVGLVESKI BACU013702/1-618 DEILQGKSDW SKLLEPPNFF QKY------- ---------- ---------- bmy_03008T0/1-687 DEILQGKSDW SKLLEPPNFF QKYRHYIVLT ASASTEENHL EWVGLVESKI 401 450 ENSTTRP00000005900/1-741 RVLVGNLERN EFITLAHVNP QSFPGNKEHH KXXXXXXXXX XXXXXXXXXX ENSP00000238714/1-736 RVLVGNLERN EFITLAHVNP QSFPGNKEHH KDNNYVSMWF LGIIFRRVEN ENSBTAP00000009749/1-740 RVLVGNLERN EFITLAHVNP QSFPGNKEHH KDNNYVSMWF LGIIFRRVEN BACU013702/1-618 ---------- ---------- ---------- -SNNYVSMWF LGIIFRRVEN bmy_03008T0/1-687 RVLVGNLERN EFITLAHVNP QSFPGNKEHH KDNNYVSMWF LGIIFRRVEN 451 500 ENSTTRP00000005900/1-741 XXXXXXXXXX XXXXXXXXXY RQANNINMLK EGMKIEATHV KKKQLHHYLP ENSP00000238714/1-736 AESVNIDLTY DIQSFTDTVY RQANNINMLK EGMKIEATHV KKKQLHHYLP ENSBTAP00000009749/1-740 AESVNIDLTY DIQSFTDTVY RQANNINMLK EGMKIEATHV KKKQLHHYLP BACU013702/1-618 AESVNIDLTY DIQSFTDTVY RQANNINMLK EGMKIEATHV KKKQLHHYLP bmy_03008T0/1-687 AESVNIDLTY DIQSFTDTVY RQANNINMLK EGMKIEATHV KKKQLHHYLP 501 550 ENSTTRP00000005900/1-741 AEILQKKKKQ SLSDVSRSSS GPQSKRSSLD SNCLDSSRDT DNGTPFNSPV ENSP00000238714/1-736 AEILQKKKKQ SLSDVNRSSG GLQSKRLSLD SSCLDSSRDT DNGTPFNSPA ENSBTAP00000009749/1-740 AEILQKKKKQ SLSDVTRSSS GPQSKRSSLD SNCLDSSRDT DNETPFNSPV BACU013702/1-618 AEILQKKKKQ SLSDVSRSSS GPQSKRSSLD SNCLDSSRDT DNGTPFNSPV bmy_03008T0/1-687 AEILQKKKKQ SLSDVSRSSS GPQSKRSSLD SNCLDSSRDT DNGTPFNSPV 551 600 ENSTTRP00000005900/1-741 STNKPSKPDS PPSAETERNN AEPAAVVVEK PLTVPPAQGL SIPVIGAKVD ENSP00000238714/1-736 -----SKSDS PSVGETERNS AEPAAVIVEK PLSVPPAQGL SIPVIGAKVD ENSBTAP00000009749/1-740 SANKPSKPDI PPSGETERNN AEPAAVIVEK PLSVPPAQGL SIPVIGAKVD BACU013702/1-618 STNKPSKPDI PPSGETERNN AEPAAVVVEK PLTVPPAQGL SIPVIGAKVD bmy_03008T0/1-687 STNKPSKPDI PPSGETERNN AEPAAVVVEK PLTVPPAQGL SIPVIGAKVD 601 650 ENSTTRP00000005900/1-741 SAVKAVSPPA VCTIPTVVGR NVIPRITTPH SPAQGQPHLN GMSNITKNVT ENSP00000238714/1-736 STVKTVSPPT VCTIPTVVGR NVIPRITTPH NPAQGQPHLN GMSNITKTVT ENSBTAP00000009749/1-740 SALKAVSPPA VCTIPTVVGR NVIPRV-TPH NPVQGQPHLN GMSNVTKNVT BACU013702/1-618 SAVKAVSPPA VCTIPTVVGR NVIPRITTPH SPAQGPPHLN GMSHITKNVA bmy_03008T0/1-687 SAVKAVSPPA VCTIPTVVGR NVIPRITTPH NPAQGQPHLN GMSNITKNVA 651 700 ENSTTRP00000005900/1-741 PKRSHSPSID GSSKRLKDIE KFIRLESTFK ESRAAEDRKR KSVDAIGGEC ENSP00000238714/1-736 PKRSHSPSID GTPKRLKDVE KFIRLESTFK DPRTAEERKR KSVDAIGGES ENSBTAP00000009749/1-740 PKRPHSPSVD GSSKRLKDIE KFIRLESTFK ESRAAEDRKR KSVDAIGGEC BACU013702/1-618 TKRSHSPSID GSSKRLKDIE KFIRLESTFK ESRAAEDRKR KSVDAIGGEC bmy_03008T0/1-687 TKRSHSPSVD GSSKRLKDIE KFIRLESTFK ESRAAEDRKR KSVDAIGGEC 701 750 ENSTTRP00000005900/1-741 MPIPTIDTSR KKRLPSKELP DSSSPVPANN IRVIKNSIRL TLNR ENSP00000238714/1-736 MPIPTIDTSR KKRLPSKELP DSSSPVPANN IRVIKNSIRL TLNR ENSBTAP00000009749/1-740 MPIPTIDTSR KKRLPSKELP DSSSPVPANN IRVIKNSIRL TLNR BACU013702/1-618 MPIPTIDTSR KKRLPSKELP DSSSPVPANN IRVIKNSIRL TLNR bmy_03008T0/1-687 MPIPTIDTSR KKRLPSKELP DSSSPVPANN IRVIKNSIRL TLNR