KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:13 2014 Check: 00 .. Name: ENSP00000344115/1-784 Len: 791 Check: 7415 Weight: 1.00 Name: ENSTTRP00000010433/1-779 Len: 791 Check: 6648 Weight: 1.00 Name: ENSBTAP00000009760/1-619 Len: 791 Check: 7928 Weight: 1.00 Name: bmy_05308T0/1-732 Len: 791 Check: 5267 Weight: 1.00 Name: BACU018079/1-782 Len: 791 Check: 6930 Weight: 1.00 // 1 50 ENSP00000344115/1-784 MQRLMMLLAT SGACLGLLAV AAVAAAGANP AQRDTHSLLP THRRQKRDWI ENSTTRP00000010433/1-779 MQVFVMLLAA GGTCLGLL-- ---AAAAVNP DQPNPPSSLP IHRRQKRDWI ENSBTAP00000009760/1-619 ---------- ---------- ---------- ---------- ---------- bmy_05308T0/1-732 MQVLVVLLAA GGTCLGLL-- -AATAAAVNP GRPNTPSSLP VHRRQKRDWI BACU018079/1-782 MQVLVVLLAA GGTCLGLL-- -AAAAAAINP GRPNTPSSLP IHRRQKRDWI 51 100 ENSP00000344115/1-784 WNQMHIDEEK NTSLPHHVGK -----IKSSV SRKNAKYLLK GEYVGKVFRV ENSTTRP00000010433/1-779 WNQMHIDEEK NGSLPHYVGK -----IKSSV NRKNTKYQLK GESAGKVFQV ENSBTAP00000009760/1-619 ---------- ---------- ---------- ---------- ---------- bmy_05308T0/1-732 WNQMHIDEEK NGSLPHYVGK TLVYGIKSSV NRKNTKYQLK GESAGKVFQV BACU018079/1-782 WNQMHIDEEK NGSLPHYVGK -----IKSSV NRKNTKYQLK GESAGKVFQV 101 150 ENSP00000344115/1-784 DAETGDVFAI ERLDRENISE YHLTAVIVDK DTGENLETPS SFTIKVHDVN ENSTTRP00000010433/1-779 DESTGDVYAF ERLDREKISE YHLIALVVDK NTEKNLESPS SFTIKVHDIN ENSBTAP00000009760/1-619 ---------- ---------- ---------- ---------- ---------- bmy_05308T0/1-732 DESTGDVYAF ERLDREKLSE YHLVALVVDK DTEKNLESPS SFTIKVHDIN BACU018079/1-782 DESTGDVYAF ERLDREKLSE YHLVALVVDK DTEKNLESPS SFTIKVHDIN 151 200 ENSP00000344115/1-784 DNWPVFTHRL FNASVPESSA VGTSVISVTA VDADDPTVGD HASVMYQILK ENSTTRP00000010433/1-779 DNWPVFTHRV FNASVPEMSG IGTSVIQLTA MDADDPTVAD HASVVYQLLK ENSBTAP00000009760/1-619 ---------- ---------- -GTSVIQVTA MDADDPTVAD HASVVYQLTK bmy_05308T0/1-732 DNWPVFTHRV FNASVPEMSG IGTSVIQVTA VDADDPTVAD HASVMYQLLK BACU018079/1-782 DNWPVFTHRV FNASVPEMSG IGTSVIQVTA VDADDPTVAD HASVMYQLLK 201 250 ENSP00000344115/1-784 GKEYFAIDNS GRIITITKSL DREKQARYEI VVEARDAQGL RGDSGTATVL ENSTTRP00000010433/1-779 GEEHFSIRGS GLIVTANKNL DREKQAKYEI VVEARDAQGL RGESGTATVL ENSBTAP00000009760/1-619 GKENFDIRGS GLIVTMNKHL DRETQDKYEV VVKAEDAQGR RGESGTATVF bmy_05308T0/1-732 GEEHFSIRGS ---------- ---------- ---------- ---------- BACU018079/1-782 GEEHFSIRGS GLIVTANKNL DREKQAKYEI VVEARDAQGL RGESGTATVL 251 300 ENSP00000344115/1-784 VTLQDINDNF PFFTQTKYTF VVPEDTRVGT SVGSLFVEDP DEPQNRMTKY ENSTTRP00000010433/1-779 ISLQDVNDNF PIFTQSRYIF SVPEDIRVGS PLGSLFVEDP DEPQNRKTKY ENSBTAP00000009760/1-619 ITLQDVNDNF PIFTQNRYTF SVPEDIRVGS PLGSLFVEDP DEPQNRKTKY bmy_05308T0/1-732 ---------- -----ARYIF SVPEDIRVGS PLGSLFVEDP DEPQNRKTKY BACU018079/1-782 ISLQDVNDNF PIFTQSRYIF SVPEDIRVGS PLGSLFVEDP DEPQNRKTKY 301 350 ENSP00000344115/1-784 SILRGDYQDA FTIETNPAHN EGIIKPMKPL DYEYIQQYSF IVEATDPTID ENSTTRP00000010433/1-779 SIVQGEYRDT FTIEPDPSRN EGIIKPMKPL DYERIRQYSF TIEATDPTID ENSBTAP00000009760/1-619 SFVQGEYRDT FTIDTDPSHN EGIIKPIKPL DYERIRQYSF TIEATDPTID bmy_05308T0/1-732 SIVQGEYRDT FTIEPDPTRN EGIIKPMKPL DYEHIRQYSF TIEATDPTID BACU018079/1-782 SIVQGEYRDT FTIEPDPTRN EGIIKPMKPL DYEHIRQYSF TIEATDPTID 351 400 ENSP00000344115/1-784 LRYMSP-PAG NRAQVIINIT DVDEPPIFQQ PFYHFQLKEN QKKPLIGTVL ENSTTRP00000010433/1-779 LRYLSSTSTK NIARVIINVT DVDEPPTFQQ PFYHFQLREN QKKPLIGSVL ENSBTAP00000009760/1-619 LRYLGSTSPK NIARVIINVT DVDEPPIFQQ PFYHFQLQEN QKKPLIGSVL bmy_05308T0/1-732 LRYLSSTSTK NIARVIINVT DVDEPPSFQQ PFYHFQLREN QKKPLIGSVL BACU018079/1-782 LRYLSSTSTK NIARVIINVT DVDEPPSFQQ PFYHFQLREN QKKPLIGSVL 401 450 ENSP00000344115/1-784 AMDPDAARHS IGYSIRRTSD KGQFFRVTKK GDIYNEKELD REVYPWYNLT ENSTTRP00000010433/1-779 AVDPDAAKRS IRYSIRRTSD KGQFFGITKQ GNIYNEKELD REVYPWCNLT ENSBTAP00000009760/1-619 AKDPDAAQRD IRYSIRRTSD KGQFFGITKK GGIYNDKELD REVYPWYNLT bmy_05308T0/1-732 AVDPDAAKRS IRYSIRRTSD KGQFFGITKQ GNIYNEKELD REVYPWCNLT BACU018079/1-782 AVDPDAAKRS IRYSIRRTSD KGQFFGITKQ GNIYNEKELD REVYPWCNLT 451 500 ENSP00000344115/1-784 VEAKELDSTG TPTGKESIVQ VHIEVLDEND NAPEFAKPYQ PKVCENAVHG ENSTTRP00000010433/1-779 VEAKEVDSSG TPTGKESIVQ VHIEVLDEND NAPEFAKPYE PKVCENAAQG ENSBTAP00000009760/1-619 VEAKEVDLSG TPTGKESIVQ VHIEVMDEND NAPEFAKPYE PKVCENAPQG bmy_05308T0/1-732 VEAKELDSSG TPTGKESIVQ VHIEVMDEND NAPEFAKPYE PKVCENAAQG BACU018079/1-782 VEAKELDSSG TPTGKESIVQ VHIEVMDEND NAPEFAKPYE PKVCENAAQG 501 550 ENSP00000344115/1-784 QLVLQISAID KDITPRNVKF KFILNTEN-N FTLTDNHDNT ANITVKYGQF ENSTTRP00000010433/1-779 KLVVQISAID KDITPRDVKF KFSLSTEDSN FTLTDNHXXX XXXXXXXXXX ENSBTAP00000009760/1-619 KLVVQISATD KDITPRDVKF KFSLSTEDSN FTLIDNHDNT ANIIVKYGYF bmy_05308T0/1-732 KLVVQISAID KDITPRDVKF KFSLSTEDSN FTLTDNHDNT ANITVKYGYF BACU018079/1-782 KLVVQISAID KDITPRDVKF KFSLSTEDSN FTLTDNHDNT ANITVKYGYF 551 600 ENSP00000344115/1-784 DREHTKVHFL PVVISDNGMP SRTGTSTLTV AVCKCNEQGE FTFCEDMAAQ ENSTTRP00000010433/1-779 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXEVAAQ ENSBTAP00000009760/1-619 DRERAKVHHL PVLISDNGRP SLTGTSTLHV TVCKCNEHGE FTLCEEAAAQ bmy_05308T0/1-732 DRERAKVHHL PVLISDNGRP SLTGTSMLDV TVCKCNERGE FTLCEEVAAQ BACU018079/1-782 DRERAKVHHL PVLISDNGRP SLTGTSMLDV TVCKCNERGE FTLCEEVAAQ 601 650 ENSP00000344115/1-784 VGVSIQAVVA ILLCILTITV ITLLIFLRRR LRKQARAHGK SVPEIHEQLV ENSTTRP00000010433/1-779 VGVSIQ-VVA IILCILTITV ITLLIILRRR LRKQARAHGK SVPEIHEQLV ENSBTAP00000009760/1-619 VGISIQALVA IFLCILTFTV ITLLIILRRR LRKQARAHGK SVPEIHEQLV bmy_05308T0/1-732 VGVSIQALVA IFLCILTITV ITLLIILRRR LRKQARAHGK SVPEIHEQLV BACU018079/1-782 VGVSIQALVA IFLCILTITV ITLLIILRRR LRKQARAHGK SVPEIHEQLV 651 700 ENSP00000344115/1-784 TYDEEGGGEM DTTSYDVSVL NSVRRGGAKP PRPALDARPS LYAQVQKPPR ENSTTRP00000010433/1-779 TYDEEGGGEM DTTSYDVSVL NSVRHGGTKP PRPALDTRPS LYAQVQKPPR ENSBTAP00000009760/1-619 TYDEEGGGEM DTTSYDVSVL NSARHGGAKP PRPALDARPS LYAQVQKPPR bmy_05308T0/1-732 TYDEEGGGEM DTTSYDVSVL NSVRHGGTKP PRPALDTRPS LYAQVQKPPR BACU018079/1-782 TYDEEGGGEM DTTSYDVSVL NSVRHGGTKP PRPALDTRPS LYAQVQKPPR 701 750 ENSP00000344115/1-784 HAPGAHGGPG EMAAMIEVKK DEADHDGDGP PYDTLHIYGY EGSESIAESL ENSTTRP00000010433/1-779 HAPGAH-GPG EMAAMIEVKK DEADHDGGGP PYDTLHIYGY EGAESIAESL ENSBTAP00000009760/1-619 QAPGAH-APG EMAAMIGVKK DEADHDGGGP PYDTLHIYGY EGAESIAESL bmy_05308T0/1-732 HAPGAH-GPG EMAAMIEVKK DEADHDGGGP PYDTLHIYGY EGAESIAESL BACU018079/1-782 HAPGAH-GPG EMAAMIEVKK DEADHDGGGP PYDTLHIYGY EGAESIAESL 751 800 ENSP00000344115/1-784 SSLGTDSSDS DVDYDFLNDW GPRFKMLAEL YGSDPREELL Y ENSTTRP00000010433/1-779 SSLGTDSSDS DIDYDFLNDW GPRFKMLAEL YGSDPREELV Y ENSBTAP00000009760/1-619 SSLGTDSSDS DIDYDFLNDW GPRFKMLAEL YGSDPQEELV Y bmy_05308T0/1-732 SSLGTDSSDS DIDYDFLNDW GPRFKMLAEL YGSEPREELV Y BACU018079/1-782 SSLGTDSSDS DIDYDFLNDW GPRFKMLAEL YGSDPREELV Y