KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:19 2014 Check: 00 .. Name: ENSP00000321005/1-332 Len: 414 Check: 318 Weight: 1.00 Name: ENSBTAP00000009774/1-255 Len: 414 Check: 6785 Weight: 1.00 Name: bmy_15238T0/1-305 Len: 414 Check: 736 Weight: 1.00 Name: BACU008442/1-284 Len: 414 Check: 4282 Weight: 1.00 Name: ENSTTRP00000004895/1-295 Len: 414 Check: 773 Weight: 1.00 // 1 50 ENSP00000321005/1-332 MRLLVLLWGC LLLPGYEALE GPEEISGFEG DTVSLQCTYR EELRDHRKYW ENSBTAP00000009774/1-255 MRPLLMLWGC LVLPGYGSVV NPKEISGFEG DTVSLQCTYE EELKKHQKYW bmy_15238T0/1-305 MRPLVLLWGC LVLPGCGALV GPKEISGFEG GTVSLQCTYG EELKKYRKYW BACU008442/1-284 MRPLVLLWGC LVLPGYGSLV GPKEISGFEG GTVSLQCTYG EELKKYRKYW ENSTTRP00000004895/1-295 MRPLVLLWGC LVLPGYEALE GPKEVSGFEG DTVSLQCTYG EELKKYRKYW 51 100 ENSP00000321005/1-332 CRKGGILFSR CSGTIYAEEE GQETMKGRVS IRDSRQELSL IVTLWNLTLQ ENSBTAP00000009774/1-255 CREAGLFISR CTGTVFSGEY GQE---GRVS VHDNPRENRF TVILRNLTLK bmy_15238T0/1-305 CRESGFLISR CSGTVYSGEY GQE---GRVS VHDNPRQLRF EVILRNLTLK BACU008442/1-284 CRESGFLISR CSGTVYSGEY GQE---GRVS VHDSPRQLRF EVILRNLTLK ENSTTRP00000004895/1-295 CRESGFLISR CSGTVYSGEY GQE---GRVS VHDNPRQLRF EVTLRNLTLK 101 150 ENSP00000321005/1-332 DAGEYWCGVE KRGPDESLLI SLFVFPGPCC PPSPSPTFQP LATTRLQPKA ENSBTAP00000009774/1-255 DRGKYLCGVK RLGFDKTMSV SLLVFP---- ---------- ---------- bmy_15238T0/1-305 DMGQYWCGVK RVGFDKTFSV SLLVFP---- ---------- ---------- BACU008442/1-284 DMGQYWCGVK RVGFDKTFSV SLLVFP---- ---------- ---------- ENSTTRP00000004895/1-295 DVGQYWCGAK RMGFDKTFSV SLLVFP---- ---------- ---------- 151 200 ENSP00000321005/1-332 KAQQTQPPGL TSPGLYPAAT TAKQGKTGAE APPLPGTSQY GHERTSQY-- ENSBTAP00000009774/1-255 ---------- ---------- ---------- ---------- ---------- bmy_15238T0/1-305 ---------- ASAGLHLTVT TAKLGKTGAE ASPFTGTSPS ECAATSPYAG BACU008442/1-284 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004895/1-295 ---------- ASAGLHLTVT TAKLGKTGAE VSPFTGTSPS EHAGTSPY-- 201 250 ENSP00000321005/1-332 ---------- ---------- ---------- ---------- TGTSPHPATS ENSBTAP00000009774/1-255 ---------- ---------- ---------- ---------- -GTSLHPATS bmy_15238T0/1-305 TSPHPATSPF ARTSSHPATS PYAGTSPYTR TSPYAAALTN AGTSPHPATS BACU008442/1-284 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004895/1-295 ---------- ---------- ---------- ---------- AGTSPHPATS 251 300 ENSP00000321005/1-332 PPAGSSRPPM QLDSTSAEDT SPALSSGSSK PRVSIPMVRI LAPVLVLLSL ENSBTAP00000009774/1-255 PPAGISQPAT QLDSTSTEDT SFVPS-SSSK SRVSIPLIRI LAPVLVLLAL bmy_15238T0/1-305 PPAGISRQAT QLDSTSTEDT SF--GVHPDD PHV------- ---------- BACU008442/1-284 ---GISRQAT QLDSTSTEDT NFVPSRSSSK PRVSIPMTRM LAPVLVLLAL ENSTTRP00000004895/1-295 PPAGISRQAT RLDSTSTEDT SFVPIRSSSK TRVSVPMTRM LAPVLVLLAL 301 350 ENSP00000321005/1-332 LSAAGLIAFC SHLLLWRKEA QQATETQRNE KFCLSRL--- ---------- ENSBTAP00000009774/1-255 LLATGLAALG NYMFQRREKA QLASETQKKD KVHLSHL--- ---------- bmy_15238T0/1-305 --GPGPGAAG P-------SA GHRPGRPRQL RAP------- ---------- BACU008442/1-284 LLATGLAALG SYMLQWRKKA QLAMETPRKE KVHLSHLPLG NSWVPEYAVI ENSTTRP00000004895/1-295 LLATGLAALG SYMLQWRKKA QLATETQRKE KVHLSHL--- ---------- 351 400 ENSP00000321005/1-332 ---------- ---------- -------TAE EKEAPSQAPE GDVISMPPLH ENSBTAP00000009774/1-255 ---------- ---------- -------TSE DDEASWRDPK GDMTPASTLP bmy_15238T0/1-305 ---------- ---------- -------TSK EDEASWQTPE GDMTPGPPLP BACU008442/1-284 DLAGPTGPPA SPKPSASPNV EIQCLSQTSK EDEASWQTPE GDMTPGPPLP ENSTTRP00000004895/1-295 ---------- ---------- -------TSK EDEASWQTPE GDMTPGPPLP 401 450 ENSP00000321005/1-332 TSEEELGFSK FVSA ENSBTAP00000009774/1-255 MSGDEPGFSK FSSV bmy_15238T0/1-305 VSGDEPDFSK FISV BACU008442/1-284 VSRDEPDFSK FISV ENSTTRP00000004895/1-295 VSGDEPDFSK FISV