KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:23 2014 Check: 00 .. Name: ENSTTRP00000006349/1-776 Len: 826 Check: 8306 Weight: 1.00 Name: bmy_20105T0/1-602 Len: 826 Check: 2874 Weight: 1.00 Name: ENSP00000295770/1-826 Len: 826 Check: 254 Weight: 1.00 Name: BACU014656/1-680 Len: 826 Check: 9268 Weight: 1.00 Name: ENSBTAP00000009782/1-822 Len: 826 Check: 529 Weight: 1.00 // 1 50 ENSTTRP00000006349/1-776 MAEPSAPESK HKSSLNSSPW SGLMALGNSR HGHHGPGAQC AHKAAGGAA- bmy_20105T0/1-602 ---------- ---------- ---------- ---------- ---------- ENSP00000295770/1-826 MAEPSAPESK HKSSLNSSPW SGLMALGNSR HGHHGPGAQC AHKAAGGAAP BACU014656/1-680 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009782/1-822 MAEPSAPESK HKSSLNSSPW SGLMALGNSR ---HGPGAQC AHKAAGGAA- 51 100 ENSTTRP00000006349/1-776 PKPAPAGLSG GLSQPAGWQS LLSFTILFLA WLAGFSSRLF AVIRFESIIH bmy_20105T0/1-602 ---------- ---------- ---------- ---------- ---------- ENSP00000295770/1-826 PKPAPAGLSG GLSQPAGWQS LLSFTILFLA WLAGFSSRLF AVIRFESIIH BACU014656/1-680 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009782/1-822 PKPAPAGLSG GLSQPAGWQS LLSFTILFLA WLAGFSSRLF AVIRFESIIH 101 150 ENSTTRP00000006349/1-776 EFDPWFNYRS THHLASHGFY EFLNWFDERA WYPLGRIVGG TVYPGLMITA bmy_20105T0/1-602 ---------- ---------- ---------- ---------- ---------- ENSP00000295770/1-826 EFDPWFNYRS THHLASHGFY EFLNWFDERA WYPLGRIVGG TVYPGLMITA BACU014656/1-680 ---------- ---------- ---------- ---------- ------MITA ENSBTAP00000009782/1-822 EFDPWFNYRS THHLASHGFY EFLNWFDERA WYPLGRIVGG TVYPGLMITA 151 200 ENSTTRP00000006349/1-776 GLIHWILNTL NITVHIRDVC VFLAPTFSGL TSISTFLLTR ELWNQGAGLL bmy_20105T0/1-602 ---------- ---------- ---------- MDAHNYMFTK HLT------- ENSP00000295770/1-826 GLIHWILNTL NITVHIRDVC VFLAPTFSGL TSISTFLLTR ELWNQGAGLL BACU014656/1-680 GLIHWILNTL NITVHIRDVC VFLAPTFSGL TSISTFLLTR ELWNQGAGLL ENSBTAP00000009782/1-822 GLIHWILNTL NITVHIRDVC VFLAPTFSGL TSISTFLLTR ELWNQGAGLL 201 250 ENSTTRP00000006349/1-776 AACFIAIVPG YISRSVAGSF DNEGIAIFAL QFTYYLWVKS VKTGSVFWTM bmy_20105T0/1-602 ---FF----- ----HSAGTF ---------- -INFIISVKS VKTGSVFWTM ENSP00000295770/1-826 AACFIAIVPG YISRSVAGSF DNEGIAIFAL QFTYYLWVKS VKTGSVFWTM BACU014656/1-680 AACFIAIVPG YISRSVAGSF DNEGIAIFAL QFTYYLWVKS VKTGSVFWTM ENSBTAP00000009782/1-822 AACFIAIVPG YISRSVAGSF DNEGIAIFAL QFTYYLWVKS VKTGSVFWTM 251 300 ENSTTRP00000006349/1-776 CCCLSYFYMV SAWGGYVFII NLIPLHVFVL LLMQRYSKRV YIXXXXXXXX bmy_20105T0/1-602 CCCLSYFYMV SAWGGYVFII NLIPLHVFVL LLMQRYSKRV YIAYSTFYIV ENSP00000295770/1-826 CCCLSYFYMV SAWGGYVFII NLIPLHVFVL LLMQRYSKRV YIAYSTFYIV BACU014656/1-680 CCCLSYFYMV SAWGGYVFII NLIPLHVFVL LLMQRYSKRV YIAYSTFYIV ENSBTAP00000009782/1-822 CCCLSYFYMV SAWGGYVFII NLIPLHVFVL LLMQRYSKRV YIAYSTFYIV 301 350 ENSTTRP00000006349/1-776 XXXXXXXXXX XXXXX----- ---------- ---------- ---------- bmy_20105T0/1-602 GLILSMQIPF VGFQPIRTSE HMAAAGVFAL LQAYAFLQYL RDRLTKQEFQ ENSP00000295770/1-826 GLILSMQIPF VGFQPIRTSE HMAAAGVFAL LQAYAFLQYL RDRLTKQEFQ BACU014656/1-680 GLILSMQIPF VGFQPIRTSE HMAAAGVFAL LQAYAFLQYL RDRLTKQEFQ ENSBTAP00000009782/1-822 GLILSMQIPF VGFQPIRTSE HMAAAGVFAL LQAYAFLQYL RDRLTKQEFQ 351 400 ENSTTRP00000006349/1-776 ---------- ----XXXXXX XXXXXYIAPW SGRFYSLWDT GYAKIHIPII bmy_20105T0/1-602 TLFFLGVSLA AGAVFLSVIY LTYTGYIAPW SGRFYSLWDT GYAKIHIPII ENSP00000295770/1-826 TLFFLGVSLA AGAVFLSVIY LTYTGYIAPW SGRFYSLWDT GYAKIHIPII BACU014656/1-680 TLFFLGVSLA AGAVFLSVIY LTYTGYIAPW SGRFYSLWDT GYAKIHIPII ENSBTAP00000009782/1-822 TLFFLGVSLA AGAVFLSVIY LTYTGYIAPW SGRFYSLWDT GYAKIHIPII 401 450 ENSTTRP00000006349/1-776 ASVSEHQPTT WVSFFFDLHI LVCTFPAGLW FCIKNINDER VFVALYAISA bmy_20105T0/1-602 ASVSEHQPTT WVSFFFDLHI LVCTFPAGLW FCIKNINDER VFVALYAISA ENSP00000295770/1-826 ASVSEHQPTT WVSFFFDLHI LVCTFPAGLW FCIKNINDER VFVALYAISA BACU014656/1-680 ASVSEHQPTT WVSFFFDLHI LVCTFPAGLW FCIKNINDER VFVALYAISA ENSBTAP00000009782/1-822 ASVSEHQPTT WVSFFFDLHI LVCTFPAGLW FCIKNINDER VFVALYAISA 451 500 ENSTTRP00000006349/1-776 VYFAGVMVRL MLTLTPVVCM LSAIAFSNVF EHYLGDDMKR ENPPVEDSSD bmy_20105T0/1-602 VYFAGVMVRL MLTLTPVVCM LSAIAFSNVF EHYLGDDMKR ENPPVEDSSD ENSP00000295770/1-826 VYFAGVMVRL MLTLTPVVCM LSAIAFSNVF EHYLGDDMKR ENPPVEDSSD BACU014656/1-680 VYFAGVMVRL MLTLTPVVCM LSAIAFSNVF EHYLGDDMKR ENPPVEDSSD ENSBTAP00000009782/1-822 VYFAGVMVRL MLTLTPVVCM LSAIAFSNVF EHYLGDDMKR ENPPVEDSSD 501 550 ENSTTRP00000006349/1-776 EDDKRNPGNL YDKAGKVRKH VTEQEKTEEG LGPNIKSIVT MLMLMLLMMF bmy_20105T0/1-602 EDDKRNPGNL YDKAGKVRKH VTEQEKTEEG LGPNIKSIVT MLMLMLLMMF ENSP00000295770/1-826 EDDKRNQGNL YDKAGKVRKH ATEQEKTEEG LGPNIKSIVT MLMLMLLMMF BACU014656/1-680 EDDKRNPGNL YDKAGKVRKH VTEQEKTEEG LGPNIKSIVT MLMLMLLMMF ENSBTAP00000009782/1-822 EDDKRNPGNL YDKAGKVRKH VTEQEKTEEG LGPNIKSIVT MLMLMLLMMF 551 600 ENSTTRP00000006349/1-776 AVHCTWVTSN AYSSPSVVLA SYNHDGTRNI LDDFREAYFW LRQNTDEHAR bmy_20105T0/1-602 AVHCTWVTSN AYSSPSVVLA SYNHDGTRNI LDDFREAYFW LRQNTDEHAR ENSP00000295770/1-826 AVHCTWVTSN AYSSPSVVLA SYNHDGTRNI LDDFREAYFW LRQNTDEHAR BACU014656/1-680 AVHCTWVTSN AYSSPSVVLA SYNHDGTRNI LDDFREAYFW LRQNTDEHAR ENSBTAP00000009782/1-822 AVHCTWVTSN AYSSPSVVLA SYNHDGTRNI LDDFREAYFW LRQNTDEHAR 601 650 ENSTTRP00000006349/1-776 VMSWWDYGYQ IAGMANRTTL VDNNTWNNSH IALVGKAMSS NETAAYKIMR bmy_20105T0/1-602 VMSWWDYGYQ IAGMANRTTL VDNNTWNNSH IALVGKAMSS NETAAYKIMR ENSP00000295770/1-826 VMSWWDYGYQ IAGMANRTTL VDNNTWNNSH IALVGKAMSS NETAAYKIMR BACU014656/1-680 VMSWWDYGYQ IAGMANRTTL VDNNTWNNSH IALVGKAMSS NETAAYKIMR ENSBTAP00000009782/1-822 VMSWWDYGYQ IAGMANRTTL VDNNTWNNSH IALVGKAMSS NETAAYKIMR 651 700 ENSTTRP00000006349/1-776 SLDVDYVLVI FGGVIGYSGD DINKFLWMVR IAEGEHPKDI RESDYFTPQG bmy_20105T0/1-602 SLDVDYVLVI FGGVIGYSGD DINKFLWMVR IAEGEHPKDI RESDYFTPQG ENSP00000295770/1-826 TLDVDYVLVI FGGVIGYSGD DINKFLWMVR IAEGEHPKDI RESDYFTPQG BACU014656/1-680 SLDVDYVLVI FGGVIGYSGD DINKFLWMVR IAEGEHPKDI RESDYFTPQG ENSBTAP00000009782/1-822 SLDVDYVLII FGGVIGYSGD DINKFLWMVR IAEGEHPKDI RESDYFTSQG 701 750 ENSTTRP00000006349/1-776 EFRVDKAGSP TLLNCLMYKM SYYRFGEMQL DFRTPPGFDR TRNAEIGNKD bmy_20105T0/1-602 EFRVDKAGSP TLLNCLMYKM SYYRFGEMQL DFRTPPGFDR TRNAEIGNKD ENSP00000295770/1-826 EFRVDKAGSP TLLNCLMYKM SYYRFGEMQL DFRTPPGFDR TRNAEIGNKD BACU014656/1-680 EFRVDKAGSP TLLNCLMYKM SYYRFGEMQL DFRTPPGFDR TRNAEIGNKD ENSBTAP00000009782/1-822 EFRVDKAGSP TLLNCLMYKM SYYRFGEMQL DFRTPPGFDR TRNAEIGNKD 751 800 ENSTTRP00000006349/1-776 IKFKHLEEAF TSEHWLVRIY KVKAPDNRET LDHKPRVTNI FPKQKYLSKK bmy_20105T0/1-602 IKFKHLEEAF TSEHWLVRIY KVKAPDNRVT LDHKPR---- ---------- ENSP00000295770/1-826 IKFKHLEEAF TSEHWLVRIY KVKAPDNRET LDHKPRVTNI FPKQKYLSKK BACU014656/1-680 IKFKHLEEAF TSEHWLVRIY KVKAPDNRVT LDHKPRVTNI FPKQKYLSKK ENSBTAP00000009782/1-822 IKFKHLEEAF TSEHWLVRIY KVKAPDNRET LDHKPRVTNI FPKQKYLSKK 801 850 ENSTTRP00000006349/1-776 TAKRKRGYIK NKLVFKKGKK ISKKTV bmy_20105T0/1-602 TAKRKRGYIK NKLVFKKGKK ISKKTV ENSP00000295770/1-826 TTKRKRGYIK NKLVFKKGKK ISKKTV BACU014656/1-680 TAKRKRGYIK NKLVFKKGKK ISKKTV ENSBTAP00000009782/1-822 TAKRKRGYIK NKLVFKKGKK ISKKTL