KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:25 2014 Check: 00 .. Name: ENSBTAP00000009796/1-241 Len: 349 Check: 883 Weight: 1.00 Name: ENSP00000358525/1-241 Len: 349 Check: 1524 Weight: 1.00 Name: BACU002679/1-312 Len: 349 Check: 5088 Weight: 1.00 Name: bmy_16688T0/1-294 Len: 349 Check: 8377 Weight: 1.00 Name: ENSTTRP00000010551/1-241 Len: 349 Check: 8657 Weight: 1.00 // 1 50 ENSBTAP00000009796/1-241 ---------- ---------- ---------- ---------- ---------- ENSP00000358525/1-241 ---------- ---------- ---------- ---------- ---------- BACU002679/1-312 ---------- ---------- ---------- -------MLS GCPMASKDTV bmy_16688T0/1-294 MPALSSHRVL ARGRAVQGAG WHAGPKLSSA SGPNNSFSEG AAFCPGHTEV ENSTTRP00000010551/1-241 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000009796/1-241 ---MSMLFYT LITALLIGIQ AAPHTESNVP AGHAIPQAHW IKLQHSLDTV ENSP00000358525/1-241 ---MSMLFYT LITAFLIGIQ AEPHSESNVP AGHTIPQAHW TKLQHSLDTA BACU002679/1-312 HSVMSMLFYT LITALWIGVQ AEAYTQSNVP AGHAIPQAHW TNLQHSLDTA bmy_16688T0/1-294 HSVMSMLFYT LITALWIGVQ AKAHTQSNVP AGHAIPQAHW TNLQHSLDTA ENSTTRP00000010551/1-241 ---MSMLFYT LITALWIGVQ AEAHTQSNVP AGHAIPQAHW TNLQHSLDTA 101 150 ENSBTAP00000009796/1-241 LRRAHSAPAG PIAARVAGQT HNITVDPKLF KKRRLRSPRV LFSTQPPPVA ENSP00000358525/1-241 LRRARSAPAA AIAARVAGQT RNITVDPRLF KKRRLRSPRV LFSTQPPREA BACU002679/1-312 LRRAHSGPAA AIAARVAGQT RKITVDPKLF KKRRLRSPRV LFSTQPPPVA bmy_16688T0/1-294 LRRAHSGPAA AIAARVAGQT RKITVDPKLF KKRRLRSPRV LFSTQPPPVA ENSTTRP00000010551/1-241 LRRAHSGPAA AIAARVAGQT RKITVDPELF KKRRLRSPRV LFSTQPPPAA 151 200 ENSBTAP00000009796/1-241 ADTQDLDFEA GGASSFNRTH RSKRSSSHPV FHRGEFSVCD SISVWVGDKT ENSP00000358525/1-241 ADTQDLDFEV GGAAPFNRTH RSKRSSSHPI FHRGEFSVCD SVSVWVGDKT BACU002679/1-312 ADAQDLDLEA GGAAPFNRTH RSKRSSSHPV FHRGEFSVCD SVSVWVGDKA bmy_16688T0/1-294 ADAQDLDLEA GGAAPFNRTH RSKRSSSHPV FHRGEFSVCD SVSVWVGDKA ENSTTRP00000010551/1-241 ADAQGLDLEA GGAAPFNRTH RSKRSSSHPV FHRGEFSVCD SVSVWVGDKA 201 250 ENSBTAP00000009796/1-241 TATDIKGKEV MVLGEVNINN SVFKQYFFET KCRDPNPVDS GCRGIDAKHW ENSP00000358525/1-241 TATDIKGKEV MVLGEVNINN SVFKQYFFET KCRDPNPVDS GCRGIDSKHW BACU002679/1-312 TATDIKGKEV MVLGEVNINN SVFKQYFFET KCRDPNPVDS GCRGIDSKHW bmy_16688T0/1-294 TATDIKGKEV MVLGEVNINN SVFKQYFFET KCRDPNPVDS GCRGIDSKHW ENSTTRP00000010551/1-241 TATDIKGKEV MVLGEVNINN SVFKQYFFET KCRDPNPVDS GCRGIDSKHW 251 300 ENSBTAP00000009796/1-241 NSYCTTTHTF VKALTMDGKQ AAWRFIRIDT ACVCVLSR-- ---------- ENSP00000358525/1-241 NSYCTTTHTF VKALTMDGKQ AAWRFIRIDT ACVCVLSR-- ---------- BACU002679/1-312 NSYCTTTHTF VKALTMDGKQ AAWRFIRIDT ACVCVLSXXX XXXXXXXXXX bmy_16688T0/1-294 NSYCTTTHTF VKALTMDGKQ AAWRFIRIDT ACVCVLSR-- ---------- ENSTTRP00000010551/1-241 NSYCTTTHTF VKALTMDGKQ AAWRFIRIDT ACVCVLSR-- ---------- 301 350 ENSBTAP00000009796/1-241 ---------- ---------- ---------- --KTGQRA-- --------- ENSP00000358525/1-241 ---------- ---------- ---------- --KAVRRA-- --------- BACU002679/1-312 XXXXXXXXXX XAGKLGGEPD RPRALSLSPL PLHTLRRPSL PQPVNYFKL bmy_16688T0/1-294 ---------- ---------- ---------- --KAGRRA-- --------- ENSTTRP00000010551/1-241 ---------- ---------- ---------- --KAGRRA-- ---------