KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:26 2014 Check: 00 .. Name: ENSP00000347839/1-512 Len: 532 Check: 6619 Weight: 1.00 Name: ENSBTAP00000009814/1-511 Len: 532 Check: 1156 Weight: 1.00 Name: BACU004696/1-531 Len: 532 Check: 3795 Weight: 1.00 Name: bmy_08530T0/1-425 Len: 532 Check: 4383 Weight: 1.00 Name: ENSTTRP00000008298/1-532 Len: 532 Check: 5077 Weight: 1.00 // 1 50 ENSP00000347839/1-512 MMLSEQAQKW FPTHVQVTVL QAKDLKPKGK SGTNDTYTII QLGKEKYSTS ENSBTAP00000009814/1-511 MMLSEQAQKW FPTHVQVTVL QAKDLKPKGK SGTNDTYTII QLGKEKYSTS BACU004696/1-531 MMLSEQAQKW FPTHVQVTVL QAKALKPKGK SGTNDTYTII QLGKEKYSTS bmy_08530T0/1-425 MMLSEQAQKW FPTHVQVTVL QAKDLKPKGK SGTNDTYTII QLGKEKYSTS ENSTTRP00000008298/1-532 MMLSEQAQKW FPTHVQVTVL QAKDLKPKGK SGTNDTYTII QLGKEKYSTS 51 100 ENSP00000347839/1-512 VAEKTLEPVW KEEASFELPG LLIQGSPEKY ILFLIVMHRS LVGLDKFLGQ ENSBTAP00000009814/1-511 VAEKTLEPVW KEEASFELPG LLMQGNPEKY ILFLIVMHRS LVGLDKFLGQ BACU004696/1-531 VAEKTLEPVW KEEASFELPG LLMQGNPEKY ILFLVVMHRS LVGLDKFLGQ bmy_08530T0/1-425 VAEKTLEPVW KEEASFELPG LLMQGNPEKY ILFLIVMHRS LVGLDKFLGQ ENSTTRP00000008298/1-532 VAEKTLEPVW KEEASFELPG LLMQGNPEKY ILFLIVMHRS LVGLDKFLGQ 101 150 ENSP00000347839/1-512 VAINLNDIFE DKQRRKTEWF RLESKQGKRI KNRGEIKVNI QFMRNNMTAS ENSBTAP00000009814/1-511 VAINLNDIFE DKQRRKTEWF RLESKQGKRA KNRGEIKVNI QFMRNNMTAS BACU004696/1-531 VAINLNDIFE DKQRRKTEWF SLESKQGKRA KNRGEIKVNI QFMRNNMTAS bmy_08530T0/1-425 VAINLNDIFE DKQRRKTEWF SLESKQGKRA KNRGEIKVNI QFMRNNMTAS ENSTTRP00000008298/1-532 VAINLNDIFE DKQRRKTEWF SLESKQGKRA KNRGEIKVNI QFMRNNMTAS 151 200 ENSP00000347839/1-512 MFDLSMKDKT RSPFAKLKDK MKGRKNDGTF SDTSSAIIPS THMPDANSEF ENSBTAP00000009814/1-511 MFDLSMKDKT RSPFAKLKDK MKGRKTDGTF SDTSSAIIPS SHMPDAHTEF BACU004696/1-531 MFDLSMKDKT RSPFAKLKDK MKGRKNDGTF SDTSSAIIPS SHMPDANTEF bmy_08530T0/1-425 MFDLSMKDKT RSPFAKLKDK MKGRKNDGTF SDTSSAIIPS SHMPDANTEF ENSTTRP00000008298/1-532 MFDLSMKDKT RSPFAKLKDK MKGRKNDGTF SDTSSAIIPS SHMPDANTEF 201 250 ENSP00000347839/1-512 SSGEIQMKSK PKKPFLLGPQ RLSSAHSMSD LSGSHMSSEK LKAGTIGQTH ENSBTAP00000009814/1-511 SSSEIQMKSK PKKPFLLGPQ RLSSAHSMSD LTGAHVCSEK LKSGAVAQTH BACU004696/1-531 SSSEIQMKSK PKKPFLLGPQ RLSSAHSMSD LTGAHVSSEK LKSGTIAQTH bmy_08530T0/1-425 SSSEIQMKSK PKKPFLLGPQ RLSSAHSMSD LTGAHVSSEK LKSGTIAQTH ENSTTRP00000008298/1-532 SSSEIQMKSK PKKPFLLGPQ RLSSAHSMSD LTGAHVSSEK LKAGTVAQTH 251 300 ENSP00000347839/1-512 LLGHQLDSFG TVPESGSLKS PHRRTLSFDT SKMNQPDSIV DEGELCFGRQ ENSBTAP00000009814/1-511 LLGRQIDSFG AVPESGSLKS PHRRTLSFDT SKMNQPDSSV DAGESAFGRQ BACU004696/1-531 LLGHQIDSFG AVPESGSLRS PHRRTLSFDT SKMNQPDSTA GEGESSFGRQ bmy_08530T0/1-425 LLGHQIDSFG XVPESGSLRS PHRRTLSFDT SKMNQPDSSV GEGESSFGRQ ENSTTRP00000008298/1-532 LLGHQIGSFG AVPESGSLRS PHRRTLSFDT SKMNQPDSSV GEGESSFGRQ 301 350 ENSP00000347839/1-512 NDPFTNVTAS LPQKFATLPR KKNPFEESSE TWDSSMNLFS KPIEIRKENK ENSBTAP00000009814/1-511 NDPFTNVTAS LPQKFATLPR KKNPFEESSE SWDSSVNLFS KSIEVRKENK BACU004696/1-531 NDPFTNVTAS LPQKFATLPR KKNPFEESSE SWDSSMNLFS KSTEIRKENK bmy_08530T0/1-425 NDPFTNVTAS LPQKFATLPR KKNPFEESSE SWDSSMNLFS KSTEVRKENK ENSTTRP00000008298/1-532 NDPFTNVTAS LPQKFATLPR KKNPFEESNE SWDSSMNLFS KSTEVRKENK 351 400 ENSP00000347839/1-512 REKREKVSLF ERVTGKKDSR RSDKLNNGGS DSPCDLKSPN AFSENRQDYF ENSBTAP00000009814/1-511 REKREKVSLF ERVTGKKD-R RSDKLNNGGA DSPCDLKSPN AFSEHRQDYF BACU004696/1-531 REKREKVSLF ERVTGKKDSR RSDRLNNGGS DSPCDLKSPN AFSENRQDYF bmy_08530T0/1-425 REKREKVSLF ERVTGKKDSR RSDRLNNGGS DSPCDLKSPN AFSENRQDYF ENSTTRP00000008298/1-532 REKREKVSLF ERVTGKKDSR RSDRLNNGGS DSPCDLKSPN AFSENRQDYF 401 450 ENSP00000347839/1-512 DYESTNPFTA KFRASNIMPS SS-------- ---------- -FHMSPTSNE ENSBTAP00000009814/1-511 DYESTNPFTT KFRASNIMPS SS-------- ---------- -FHVNPTSHE BACU004696/1-531 DYESTNPFTT KFRASNIMPS SSSVWAMKVF LIDQQQIHKD SFHMNPTSNE bmy_08530T0/1-425 DYESTNPFTA KFRASNIMPS SR-------- ---------- -IQL------ ENSTTRP00000008298/1-532 DYESTNPFTT KFRASNIMPS SRDSLLNPVL AGWGSLRRAE PFHMNPTSNE 451 500 ENSP00000347839/1-512 DLRKIPDSNP FDATAGYRSL TYEEVLQELV KHKELLRRKD THIRELEDYI ENSBTAP00000009814/1-511 DLRKIPESNP FDATAGYRSL TYEEVLQELV KHKELLRRKD SHIRELEDYI BACU004696/1-531 DLRKIPDSNP FDATAGYRSL TYEEVLQELV KHKELLRRKD SHIRELEDYI bmy_08530T0/1-425 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008298/1-532 DLRKIPDSNP FDATAGYRSL TYEEVLQELV KHKELLRRKD SHIRELEDYI 501 550 ENSP00000347839/1-512 DNLLVRVMEE TPSILRVPYE PSRKAGKFSN S- ENSBTAP00000009814/1-511 DNLLVRVMEE TPSILRVPYE PSRKAGKFSN T- BACU004696/1-531 DNLLVRVMEE TPSILRVPYE PSRKAGKFSN S- bmy_08530T0/1-425 ---------- ---------- ---------- -- ENSTTRP00000008298/1-532 DNLLVRVMEE TPSILRVPYE PSRKAGKFST SS