KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:39:27 2014 Check: 00 .. Name: ENSP00000303490/1-638 Len: 823 Check: 8044 Weight: 1.00 Name: ENSBTAP00000009815/1-638 Len: 823 Check: 7653 Weight: 1.00 Name: bmy_08132T0/1-802 Len: 823 Check: 7085 Weight: 1.00 Name: ENSTTRP00000009229/1-638 Len: 823 Check: 2786 Weight: 1.00 // 1 50 ENSP00000303490/1-638 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009815/1-638 ---------- ---------- ---------- ---------- ---------- bmy_08132T0/1-802 VRPVPCGVPE VKTGEERTGF RTGSPRLPYF RSRPPMRAEG AVRSGLPVFI ENSTTRP00000009229/1-638 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000303490/1-638 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009815/1-638 ---------- ---------- ---------- ---------- ---------- bmy_08132T0/1-802 CKVGRLCQGA GRFESQLFVF ASSPASELSL LLPLLLRYSD STKDRQTLSL ENSTTRP00000009229/1-638 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000303490/1-638 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009815/1-638 ---------- ---------- ---------- ---------- ---------- bmy_08132T0/1-802 WPYSSRQIPR EAVVGRRRRF YSDHFGKLKA QGPLIVLIST TFQLRTACCP ENSTTRP00000009229/1-638 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000303490/1-638 ---------- --MAAELRMI LYEDDSVQVQ YVDGSTLQLS PCGTEFLFEK ENSBTAP00000009815/1-638 ---------- --MAAEVQMV LYEDDSVQVQ YIDGSRLQLS PCGSEFLFEK bmy_08132T0/1-802 LPWKDILSII TIMAAEVQIV LYEDDSVQVQ YVDGSRLQLS PCGSEFLFEK ENSTTRP00000009229/1-638 ---------- --MAAEVQIV LYEDDSVEVQ YVDGSRLQLS PCGSEFLFEK 201 250 ENSP00000303490/1-638 SPPVSAHPLE QPERIRQRTH FVISTYREQL QRALDFRNSS ATCPFLSETI ENSBTAP00000009815/1-638 APPVSAHPLQ QPERIRQRTH FVISAYREQL QRALDFRNSF ATCPFLSESI bmy_08132T0/1-802 APPISAHPLQ QPERIRQRTH FVISTYREQL QRALDFRNSF ATCPFLSESI ENSTTRP00000009229/1-638 APPISAHPLQ QPERIRQRTH FVISTYREQL QRALDFRNSF ATCPFLSESI 251 300 ENSP00000303490/1-638 IPSERKKHIF IDITEVRWPS LDTDGTMIYM ESGIVKITSL DGHAYLCLPR ENSBTAP00000009815/1-638 IPSEMKTRIL IDVSEVRWPS LDTGDGMTYM QSGTVRISSL DGHAYLCLPK bmy_08132T0/1-802 IPSERKKHIF TDISEVRWPG LDTDDGMICM QSGTVKISSL DGHAYLCLPK ENSTTRP00000009229/1-638 IPSERKMRIF TDISEVRWPD LDTDGGMICM QSGTVKISSL DGHAYLCLPK 301 350 ENSP00000303490/1-638 SQHEFTVHFL CKVSQKSDSS AVLSETNNKA PKDKLVEKTG KICIRGNLPG ENSBTAP00000009815/1-638 SQHEFTVHFL CKVSQKPDSS IEVSEKNNKG KKDKQVEKAG KICTRGSLSG bmy_08132T0/1-802 SQHEFTVHFL CKVSQKPDSS IVLSEKNNKA KKDKVVEKAG KICTYGSLSG ENSTTRP00000009229/1-638 SQHEFTVHFL CKVSQKPDSS IVLSEKNNKA KKDKLVEKAG KICTYGSFSG 351 400 ENSP00000303490/1-638 QRLKNKENEF HCQIMKSKET LKKMSCVNGT EGREELPSPG TKHTCVYTWV ENSBTAP00000009815/1-638 QRLKNKENEL YHQIMKSEEP SEK-SCVNGA KGREVLSSPH PKDTCIYTWV bmy_08132T0/1-802 QRLENKENEL YYQITKSKEP LEK-SCVNGT EGREALSSPG TKDTCVYTWV ENSTTRP00000009229/1-638 QRLKNKENEL YYQITKSKEP LEK-SCVNGT EGREALSSPG TKDTCVYTWV 401 450 ENSP00000303490/1-638 KQCWSVAACP EEWKYPLSLA LHFHNKISNM SKIDAHITQS RFLTSDISEE ENSBTAP00000009815/1-638 KQCWSVASCP EEWKYPLSLA LHFHDKISSM SGIDADITQK RMLTSDVSEE bmy_08132T0/1-802 KHCWSVASCP EEWKYPLSLA LRFHNKISSM SGTDADITQK RILTSDVSEE ENSTTRP00000009229/1-638 KQCWSVASCP EEWEYPLSLA LRFHNKISNM SGTDADITQK RILTSDVSEE 451 500 ENSP00000303490/1-638 RGKVVSVLPR ALSLSCPVPH LHRWNFCDSL LQRQ--SDEY SYPELVKMVW ENSBTAP00000009815/1-638 RGKEVSVLPR ALLLSCPAPH LHRWNFSDSL SQKQFGEEEY SYHELVKVVW bmy_08132T0/1-802 RGKEVSVLPR ALLLSCPVPH LHRWNYCDSL S--QFGEEEY SYPELVKVVW ENSTTRP00000009229/1-638 RGKEVSVLPR ALLLSCPVPH LHRWEFCDSL SQRQFVEEEY SYPELVKVVW 501 550 ENSP00000303490/1-638 YKGVTYRLTH QNMNSIEIYS GDGSVFKSEG AYFGNYFTYY SIQEGSGKRE ENSBTAP00000009815/1-638 YKGVTYRLTH KHMNSIEIYP GDGSVFKSEG AYLGNYFTYY SIREESEERE bmy_08132T0/1-802 YKGITYRLTH KNMNSIEVYP GDGSVFKSEG AYLGNYFIYY SIQEGSEERE ENSTTRP00000009229/1-638 YKGITYRLTH KNMNSIEVYP GDGSVFKSEG AYLGNYFIYY SIQEGSEEXX 551 600 ENSP00000303490/1-638 EKTYSVNNLP PDRPGSPFTV GSLIKQATRI LQHCVKMRLS LSHNYRICCW ENSBTAP00000009815/1-638 EKTYAVNNLP PDRPGSPFSV CSLIKQATRI LQHCAKMRLS LSHNYRVCCW bmy_08132T0/1-802 EKTYSVNNLP PDRPGSPFSV CSLIKQATRI LQHCAKMKLS LSHNYHICCW ENSTTRP00000009229/1-638 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXI LQHCAKMKLS LSHNYHICCW 601 650 ENSP00000303490/1-638 KMVPGINDSN ILPLVLKESL IPSVGRFLAY SDDKVHAIFL DGITLTLNWN ENSBTAP00000009815/1-638 KMVPGINDSS VLPLLLRESF VPGVGRFLAY SDDKVHAIFL DGITLTLNWN bmy_08132T0/1-802 KMVPGINDSN ILPLLLRESF IPNVGRFLAY SDDKVHAVFL DGITLTLNWN ENSTTRP00000009229/1-638 KMVPGINDSN ILPLLLRESF IPNVGRFLAY SDDKVHAVFL DGITLTLNWN 651 700 ENSP00000303490/1-638 FSSPIEKRQV NQGLNLGWCK LTFPDGQEQL IQIEHPEPYE RYVTTVTSWC ENSBTAP00000009815/1-638 FGSFIEKRQV NRGLTLGWCK LTFPDGQNQL IQIQHPRPYE RYVTTVISWC bmy_08132T0/1-802 FSSLIEKRQV NRGLSLGWCK LTFPDGQNQL IQIQHPGPYE RYVTTVISWC ENSTTRP00000009229/1-638 FSSLIEKRQV NRGLNLCWCK LTFPDGQNQL IQIQHPGPYE RYVTTVISWC 701 750 ENSP00000303490/1-638 RRLTQTSPRE MPTHSSSSVL QENWSVASEL EKIQKFNLLL ENSGILNQIS ENSBTAP00000009815/1-638 RRLTQISQQE IPIHPSSSVP EESWSVASEL EKIQKFNLLL ESSGVLNQTS bmy_08132T0/1-802 RRLTQTSQKE VPTHPSSSVP EENWYF---- ---------- ---GVLSQIS ENSTTRP00000009229/1-638 RRLTQTSQKE MPTHPSSSVP EENWSVASEL EKIQKFNLLL ENSGVLSQIS 751 800 ENSP00000303490/1-638 NKKNEQQSFD HYKPGSSETL LGEVNENRVS IALKKTSEIL HDIDCLLSNS ENSBTAP00000009815/1-638 NKKNK-QSLD RCKPKSSETL LKEVNEKSVS VALKKTSEIL QDIDNLLSNS bmy_08132T0/1-802 NKKNE-QSLD HCKPESSETL LKEVNEKSVS VALKKTSEIL QDIDCLLSNS ENSTTRP00000009229/1-638 NKKNE-QSLD HCKPKSSEDL LKEVNEKSVS VALKKTSEIL QDIDCLLSNS 801 850 ENSP00000303490/1-638 KK-------- ---------- --- ENSBTAP00000009815/1-638 KW-------- ---------- --- bmy_08132T0/1-802 KRFEKKFYKT VVVAVLSCGV IHY ENSTTRP00000009229/1-638 KR-------- ---------- ---