KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:28 2014 Check: 00 .. Name: BACU017867/1-960 Len: 1050 Check: 6399 Weight: 1.00 Name: ENSBTAP00000009822/1-1006 Len: 1050 Check: 3470 Weight: 1.00 Name: ENSP00000261537/1-1006 Len: 1050 Check: 3034 Weight: 1.00 Name: bmy_04007T0/1-913 Len: 1050 Check: 8736 Weight: 1.00 Name: ENSTTRP00000002468/1-1006 Len: 1050 Check: 3069 Weight: 1.00 // 1 50 BACU017867/1-960 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009822/1-1006 MSNSRNNRVM VEGVGARVVR GPDWKWGKQD GGEGHVGTVR SFESPEEVVV ENSP00000261537/1-1006 MSNSRNNRVM VEGVGARVVR GPDWKWGKQD GGEGHVGTVR SFESPEEVVV bmy_04007T0/1-913 MSNSRNNRVM VEGVGARVVR GPDWKWGKQD GGEGHVGTVR SFESPEEVVV ENSTTRP00000002468/1-1006 MSNSRNNRVM VEGVGARVVR GPDWKWGKQD GGEGHVGTVR SFESPEEVVV 51 100 BACU017867/1-960 ---------- ---------- ---------- ---MCDTCRQ QPIIGIRWKC ENSBTAP00000009822/1-1006 VWDNGTAANY RCSGAYDLRI LDSAPTGIKH DGTMCDTCRQ QPIIGIRWKC ENSP00000261537/1-1006 VWDNGTAANY RCSGAYDLRI LDSAPTGIKH DGTMCDTCRQ QPIIGIRWKC bmy_04007T0/1-913 VWDNGTAANY RCSGAYDLRI LDSAPTGIKH DGTMCDTCRQ QPIIGIRWKC ENSTTRP00000002468/1-1006 VWDNGTAANY RCSGAYDLRI LDSAPTGIKH DGTMCDTCRQ QPIIGIRWKC 101 150 BACU017867/1-960 AECTNYDLCT VCYHGDKHHL RHRFYRITTP GSERVLLESR RKSKKITARG ENSBTAP00000009822/1-1006 AECTNYDLCT VCYHGDKHHL RHRFYRITTP GSERVLLESR RKSKKITARG ENSP00000261537/1-1006 AECTNYDLCT VCYHGDKHHL RHRFYRITTP GSERVLLESR RKSKKITARG bmy_04007T0/1-913 AECTNYDLCT VCYHGDKHHL RHRFYRITTP GSERVLLESR RKSKKITARG ENSTTRP00000002468/1-1006 AECTNYDLCT VCYHGDKHHL RHRFYRITTP GSERVLLESR RKSKKITARG 151 200 BACU017867/1-960 IFAGARVVRG VDWQWEDQDG GNGRRGKVTE IQDWSASSPH SAAYVLWDNG ENSBTAP00000009822/1-1006 IFAGARVVRG VDWQWEDQDG GNGRRGKVTE IQDWSASSPH SAAYVLWDNG ENSP00000261537/1-1006 IFAGARVVRG VDWQWEDQDG GNGRRGKVTE IQDWSASSPH SAAYVLWDNG bmy_04007T0/1-913 IFAGARVVRG VDWQWEDQDG GNGRRGKVTE IQDWSASSPH SAAYVLWDNG ENSTTRP00000002468/1-1006 IFAGARVVRG VDWQWEDQDG GNGRRGKVTE IQDWSASSPH SAAYVLWDNG 201 250 BACU017867/1-960 AKNLYRVGFE GMSDLKCVQD AKGGSFYRDH CPVLGEQNGN RNPGGLQIGD ENSBTAP00000009822/1-1006 AKNLYRVGFE GMSDLKCVQD AKGGSFYRDH CPVLGEQNGN RNPGGLQIGD ENSP00000261537/1-1006 AKNLYRVGFE GMSDLKCVQD AKGGSFYRDH CPVLGEQNGN RNPGGLQIGD bmy_04007T0/1-913 AKNLYRVGFE GMSDLKCVQD AKGGSFYRDH CPVLGEQNGN RNPGGLQIGD ENSTTRP00000002468/1-1006 AKNLYRVGFE GMSDLKCVQD AKGGSFYRDH CPVLGEQNGN RNPGGLQIGD 251 300 BACU017867/1-960 LVNIDLDLEI VQSLQHGHGG WTDGMFETLT TTGTVCGIDE DHDIVVQYPS ENSBTAP00000009822/1-1006 LVNIDLDLEI VQSLQHGHGG WTDGMFETLT TTGTVCGIDE DHDIVVQYPS ENSP00000261537/1-1006 LVNIDLDLEI VQSLQHGHGG WTDGMFETLT TTGTVCGIDE DHDIVVQYPS bmy_04007T0/1-913 LVNIDLDLEI VQSLQHGHGG WTDGMFETLT TTGTVCGIDE DHDIVVQYPS ENSTTRP00000002468/1-1006 LVNIDLDLEI VQSLQHGHGG WTDGMFETLT TTGTVCGIDE DHDIVVQYPS 301 350 BACU017867/1-960 GNRWTFNPAV LTKANIVRSG DAAQGAEGGP SQFQVGDLVQ VCYDLERIKL ENSBTAP00000009822/1-1006 GNRWTFNPAV LTKANIVRSG DAAQGAEGGT SQFQVGDLVQ VCYDLERIKL ENSP00000261537/1-1006 GNRWTFNPAV LTKANIVRSG DAAQGAEGGT SQFQVGDLVQ VCYDLERIKL bmy_04007T0/1-913 GNRWTFNPAV LTKANIVRSG DAAQGAEGGP SQFQVGDLVQ VCYDLERIKL ENSTTRP00000002468/1-1006 GNRWTFNPAV LTKANIVRSG DAAQGAEGGP SQFQVGDLVQ VCYDLERIKL 351 400 BACU017867/1-960 LQRGHGEWAE AMLPTLGKVG RVQQIYSDSD LKVEVCGTSW TYNPAAVSKV ENSBTAP00000009822/1-1006 LQRGHGEWAE AMLPTLGKVG RVQQIYSDSD LKVEVCGTSW TYNPAAVSKV ENSP00000261537/1-1006 LQRGHGEWAE AMLPTLGKVG RVQQIYSDSD LKVEVCGTSW TYNPAAVSKV bmy_04007T0/1-913 LQRGHGEWAE AMLP------ ---------- ---------- ---------- ENSTTRP00000002468/1-1006 LQRGHGEWAE AMLPTLGKVG RVQQIYSDSD LKVEVCGTSW TYNPAAVSKV 401 450 BACU017867/1-960 ASAGSAISNA SGERLSQLLK KLFETQESGD LNEELVKAAA NGDVAKVEDL ENSBTAP00000009822/1-1006 ASAGSAISNA SGERLSQLLK KLFETQESGD LNEELVKAAA NGDVAKVEDL ENSP00000261537/1-1006 ASAGSAISNA SGERLSQLLK KLFETQESGD LNEELVKAAA NGDVAKVEDL bmy_04007T0/1-913 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002468/1-1006 ASAGSAISNA SGERLSQLLK KLFETQESGD LNEELVKAAA NGDVAKVEDL 451 500 BACU017867/1-960 LKRPDVDVNG QCAGHTAMQA ASQNGHVDIL KLLLKQNVDV EAEDKDGDRA ENSBTAP00000009822/1-1006 LKRPDVDVNG QCAGHTAMQA ASQNGHVDIL KLLLKQNVDV EAEDKDGDRA ENSP00000261537/1-1006 LKRPDVDVNG QCAGHTAMQA ASQNGHVDIL KLLLKQNVDV EAEDKDGDRA bmy_04007T0/1-913 -------VNG QCAGHTAMQA ASQNGHVDIL KLLLKQNVDV EAEDKDGDRA ENSTTRP00000002468/1-1006 LKRPDVDVNG QCAGHTAMQA ASQNGHVDIL KLLLKQNVDV EAEDKDGDRA 501 550 BACU017867/1-960 VHHAAFGDEG AVIEVLHRGS ADLNARNKRR QTPLHIAVNK GHLQVVKTLL ENSBTAP00000009822/1-1006 VHHAAFGDEG AVIEVLHRGS ADLNARNKRR QTPLHIAVNK GHLQVVKTLL ENSP00000261537/1-1006 VHHAAFGDEG AVIEVLHRGS ADLNARNKRR QTPLHIAVNK GHLQVVKTLL bmy_04007T0/1-913 VHHAAFGDEG AVIEVLHRGS ADLNARNKRR QTPLHIAVNK GHLQVVKTLL ENSTTRP00000002468/1-1006 VHHAAFGDEG AVIEVLHRGS ADLNARNKRR QTPLHIAVNK GHLQVVKTLL 551 600 BACU017867/1-960 DFGCHPSLQD SEGDTPLHDA ISKKRDDILA VLLEAGADVT ITNNNGFNAL ENSBTAP00000009822/1-1006 DFGCHPSLQD SEGDTPLHDA ISKKRDDILA VLLEAGADVT ITNNNGFNAL ENSP00000261537/1-1006 DFGCHPSLQD SEGDTPLHDA ISKKRDDILA VLLEAGADVT ITNNNGFNAL bmy_04007T0/1-913 DFGCHPSLQD SEGDTPLHDA ISKKRDDILA VLLEAGADVT ITNNNGFNAL ENSTTRP00000002468/1-1006 DFGCHPSLQD SEGDTPLHDA ISKKRDDILA VLLEAGADVT ITNNNGFNAL 601 650 BACU017867/1-960 HHAALRGNPS AMRVLLSKLP RPWIVDEKKD DGYTALHLAA LNNHVEVAEL ENSBTAP00000009822/1-1006 HHAALRGNPS AMRVLLSKLP RPWIVDEKKD DGYTALHLAA LNNHVEVAEL ENSP00000261537/1-1006 HHAALRGNPS AMRVLLSKLP RPWIVDEKKD DGYTALHLAA LNNHVEVAEL bmy_04007T0/1-913 HHAALRGNPS AMRVLLSKLP RPWIVDEKKD DGYTALHLAA LNNHVEVAEL ENSTTRP00000002468/1-1006 HHAALRGNPS AMRVLLSKLP RPWIVDEKKD DGYTALHLAA LNNHVEVAEL 651 700 BACU017867/1-960 LVHQGNANLD IQNVNQQTAL HLAVERQHTQ IVRLLVRAGA KLDIQDKDGD ENSBTAP00000009822/1-1006 LVHQGNANLD IQNVNQQTAL HLAVERQHTQ IVRLLVRAGA KLDIQDKDGD ENSP00000261537/1-1006 LVHQGNANLD IQNVNQQTAL HLAVERQHTQ IVRLLVRAGA KLDIQDKDGD bmy_04007T0/1-913 LVHQGNANLD IQNVNQQTAL HLAVERQHTQ IVRLLVRAGA KLDIQDKDGD ENSTTRP00000002468/1-1006 LVHQGNANLD IQNVNQQTAL HLAVERQHTQ IVRLLVRAGA KLDIQDKDGD 701 750 BACU017867/1-960 TPLHEALRHH TLSQLRQLQD MQDVGKVDAA WEPSKNTLIM GLGTQGAEKK ENSBTAP00000009822/1-1006 TPLHEALRHH TLSQLRQLQD MQDVGKVDAA WEPSKNTLIM GLGTQGAEKK ENSP00000261537/1-1006 TPLHEALRHH TLSQLRQLQD MQDVGKVDAA WEPSKNTLIM GLGTQGAEKK bmy_04007T0/1-913 TPLHEALRHH TLSQLRQLQD MQDVGKVDAA WEPSKNTLIM GLGTQGAEKK ENSTTRP00000002468/1-1006 TPLHEALRHH TLSQLRQLQD MQDVGKVDAA WEPSKNTLIM GLGTQGAEKK 751 800 BACU017867/1-960 SAASIACFLA ANGADLSIRN KKGQSPLDLC PDPSLCKALA KCHKEKVSGQ ENSBTAP00000009822/1-1006 SAASIACFLA ANGADLSIRN KKGQSPLDLC PDPSLCKALA KCHKEKVSGQ ENSP00000261537/1-1006 SAASIACFLA ANGADLSIRN KKGQSPLDLC PDPNLCKALA KCHKEKVSGQ bmy_04007T0/1-913 SAASIACFLA ANGADLSIRN KKGQSPLDLC PDPSLCKALA KCHKEKVSGQ ENSTTRP00000002468/1-1006 SAASIACFLA ANGADLSIRN KKGQSPLDLC PDPSLCKALA KCHKEKVSGQ 801 850 BACU017867/1-960 VGSRSPSMIS NDSETLEECM VCSDMKRDTL FGPCGHIATC SLCSPRVKKC ENSBTAP00000009822/1-1006 VGSRSPSMIS NDSETLEECM VCSDMKRDTL FGPCGHIATC SLCSPRVKKC ENSP00000261537/1-1006 VGSRSPSMIS NDSETLEECM VCSDMKRDTL FGPCGHIATC SLCSPRVKKC bmy_04007T0/1-913 VGSRSPSMIS NDSETLEECM VCSDMKRDTL FGPCGHIATC SLCSPRVKKC ENSTTRP00000002468/1-1006 VGSRSPSMIS NDSETLEECM VCSDMKRDTL FGPCGHIATC SLCSPRVKKC 851 900 BACU017867/1-960 LICKEQVQSR TKIEECVVCS DKKAAVLFQP CGHMCACENC ASLMKKCVQC ENSBTAP00000009822/1-1006 LLCKEQVQSR TKIEECVVCS DKKAAVLFQP CGHMCACENC ASLMKKCVQC ENSP00000261537/1-1006 LICKEQVQSR TKIEECVVCS DKKAAVLFQP CGHMCACENC ANLMKKCVQC bmy_04007T0/1-913 LICKEQVQSR TKIEECVVCS DKKAAVLFQP CGHMCACENC ANLMKKCVQC ENSTTRP00000002468/1-1006 LICKEQVQSR TKIEECVVCS DKKAAVLFQP CGHMCACENC ANLMKKCVQC 901 950 BACU017867/1-960 RAVVERRVPF IMCCGGKSSE DATDDISSGN IPVLQKDKDN TNVNADVQKL ENSBTAP00000009822/1-1006 RAVVERRVPF IMCCGGKSAE DATDDISSGN IPVLQKDKDN TNVNADVQKL ENSP00000261537/1-1006 RAVVERRVPF IMCCGGKSSE DATDDISSGN IPVLQKDKDN TNVNADVQKL bmy_04007T0/1-913 RAVVERRVPF IMCCGGKSSE DATDDISSGN IPVLQKDKDN TNVNADVQKL ENSTTRP00000002468/1-1006 RAVVERRVPF IMCCGGKSSE DATDDISSGN IPVLQKDKDN TNVNADVQKL 951 1000 BACU017867/1-960 QQQLQDIKEQ EEIQSSGEQ- ------SPHG TALLSLTKLV ETQKVNRTLH ENSBTAP00000009822/1-1006 QQQLQDIKEQ TMCPVCLDRL KNMIFLCGHG TCQLCGDRMS ECPICRKAIE ENSP00000261537/1-1006 QQQLQDIKEQ TMCPVCLDRL KNMIFLCGHG TCQLCGDRMS ECPICRKAIE bmy_04007T0/1-913 QQQLQDIKEQ TMCPVCLDRL KNMIFLCGHG TCQLCGDRMS ECPICRKAIE ENSTTRP00000002468/1-1006 QQQLQDIKEQ TMCPVCLDRL KNMIFLCGHG TCQLCGDRMS ECPICRKAIE 1001 1050 BACU017867/1-960 HYILNFARDM SSPNLPPESI TANLKSQPGV ESIPGKTCKR RQDSFVQKSG ENSBTAP00000009822/1-1006 RRILLY---- ---------- ---------- ---------- ---------- ENSP00000261537/1-1006 RRILLY---- ---------- ---------- ---------- ---------- bmy_04007T0/1-913 RRILLY---- ---------- ---------- ---------- ---------- ENSTTRP00000002468/1-1006 RRILLY---- ---------- ---------- ---------- ----------