KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:28 2014 Check: 00 .. Name: ENSP00000355437/1-486 Len: 519 Check: 6570 Weight: 1.00 Name: ENSBTAP00000009824/1-487 Len: 519 Check: 4183 Weight: 1.00 Name: ENSTTRP00000014633/1-483 Len: 519 Check: 4600 Weight: 1.00 Name: bmy_19045T0/1-519 Len: 519 Check: 9128 Weight: 1.00 Name: BACU002953/1-519 Len: 519 Check: 221 Weight: 1.00 // 1 50 ENSP00000355437/1-486 MAWAPPGERL REDARCPVCL DFLQEPVSVD CGHSFCLRCI SEFCEKSDGA ENSBTAP00000009824/1-487 MASGSPGERL CEEARCPVCL DFLQNPVSVD CGHSFCLRCI SEFCEKSDSA ENSTTRP00000014633/1-483 MASGGPGERL CEEARCPVCL DFLQKPVSVD CGHSFCLRCI SEFCEKSDSA bmy_19045T0/1-519 MASGGPGERL CEEARCPVCL DFLQKPVSVD CGHSFCLRCI SEFCEKSDSA BACU002953/1-519 MASGGPGERL CEEARCPVCL DFLQKPVSVD CGHSFCLRCI SEFCEKSDSA 51 100 ENSP00000355437/1-486 QGGVYACPQC RGPFRPSGFR PNRQLAGLVE SVRRLGLGAG P-GARRCARH ENSBTAP00000009824/1-487 QGGIYACPQC RGPFRLESFR PNRQLASLVD SVRQLGLGAE PSGARLCVRH ENSTTRP00000014633/1-483 QSGLYACPQC RGPFRLESFR PNRQLASLVD SVRQLGLGAG PSGARLCVRH bmy_19045T0/1-519 QSGLYACPQC RGPFRLESFR PNRQLASLVD SVRQLGLGAG PSGARLCARH BACU002953/1-519 QSGLYACPQC RGPFRLESFR PNRQLASLVD SVRQLGLGAG PSGARLCVRH 101 150 ENSP00000355437/1-486 GEDLSRFCEE DEAALCWVCD AGPEHRTHRT APLQEAAGSY QVKLQMALEL ENSBTAP00000009824/1-487 GEELTRFCEE DQEVLCWVCD TTPEHRSHHT ISLQEAARCY QIKLQVAQEL ENSTTRP00000014633/1-483 GEELSRFCEE DQEALCWVCD TTPEHRSHRT TPLQEAARCY QVKLQMAQEH bmy_19045T0/1-519 GEDLSRFCEE DQEALCWVCD TTPEHRSHRT TPLQEAARCY QVKLQMAQEH BACU002953/1-519 GEELSRFCEE DQEALCWVCD TTPEHRSHRT TPLQEAARCY QVKLQMAQEH 151 200 ENSP00000355437/1-486 MRKELEDALT QEANVGKKTV IWKEKVEMQR QRFRLEFEKH RGFLAQEEQR ENSBTAP00000009824/1-487 VRKELEEAST QEANVGKKTV IWKEKVEMQR QRFRWEFEKY RGFLALEEQL ENSTTRP00000014633/1-483 VR-EMEEALT EAS--GRKTV IW-EKVETQR QRFRLEFEKY RGLLALEEQL bmy_19045T0/1-519 VRKEMEEALT QEANVGKKTV IWKEKVETQR QXFRLEFEKY RGLLALEEQL BACU002953/1-519 VRKEMEEALT QEANVGKKTV IWKEKVETQR QRFRLEFEKY RGLLALEEQL 201 250 ENSP00000355437/1-486 QLRRLEAEER ATLQRLRESK SRLVQQSKAL KELADELQER CQRPALGLLE ENSBTAP00000009824/1-487 QLRRLEEEER ATLQKLRESK NRLVQQSRAL KELAEELEER CQRPALGLLE ENSTTRP00000014633/1-483 QLRRLEEEER ATLQRLRESK NRLVQQSRAL KDLAEELEER CQRPALGLLE bmy_19045T0/1-519 QLRRLEEEER ATLQRLRESK NRLVHQSRAL KDLAEELEEM CQRPALGLLE BACU002953/1-519 QLRRLEEEER ATLQRLRESK NRLVHQSRAL KDLAEELEER CQRPALSLLE 251 300 ENSP00000355437/1-486 GVRGVLS--- ---------- ---------- ---------R SKAVTRLEAE ENSBTAP00000009824/1-487 GVGGALS--- ---------- ---------- ---------R SKNVTRLEPE ENSTTRP00000014633/1-483 GAGGALS--- ---------- ---------- ---------R SKSVTRLDLE bmy_19045T0/1-519 GAGGALSRYV YFLNQRMGWE RLGRLVDNPT ENCGFCALLR SKSVTRLDPE BACU002953/1-519 GVGGALSRYV YFLNQRMGWE RLGRLVDNPT EDCGFCALLR SKSVTRLDPE 301 350 ENSP00000355437/1-486 NIPMELKTAC CIPGRRELLR KFQVDVKLDP ATAHPSLLLT ADLRSVQDGE ENSBTAP00000009824/1-487 SIVMELKTMC RIPGMREMLR KFQVDIKLDP ATAHPSLLLT ADLRSVQDGE ENSTTRP00000014633/1-483 TIPMELKTMC RIPGMREMLR KFQVDIKLDP ATAHPSLLLT ADLRSVQDGE bmy_19045T0/1-519 TIPMELKTMC RIPGMREMLR KFQVDIKLDP ATAHPSLLLT ADLRSVQDGE BACU002953/1-519 TIPMELKTMC RIPGMREMLR KFQVDIKLDP ATAHPSLLLT ADLRSVQDGE 351 400 ENSP00000355437/1-486 PWRDVPNNPE RFDTWPCILG LQSFSSGRHY WEVLVGEGAE WGLGVCQDTL ENSBTAP00000009824/1-487 LWRDVPNNPE RFDTWPCILG LQNFSSGRHY WEVMVGERAE WGLGVCQDTV ENSTTRP00000014633/1-483 LWRDVPNNPE RFDTWPCILG LQNFSSGRHY WEVMVGERAE WGLGVCQDTV bmy_19045T0/1-519 LWRDVPNNPE RFDTWPCILG LQNFSSGRHY WEVVVGERAE WGLGVCQDTV BACU002953/1-519 LWRDVPNNPE RFDTWPCILG LQNFSSGRHY WEVVVGERAE WGLGVCQDTV 401 450 ENSP00000355437/1-486 PRKGETTPSP ENGVWALWLL KGNEYMVLAS PSVPLLQLES PRCIGIFLDY ENSBTAP00000009824/1-487 SRKGEITPSP ENGVWAMWLL KGSEYMVLAS PSVPLLHLER PRCIGIFLDY ENSTTRP00000014633/1-483 SRKGETTPSP ENGVWAMWLL KGSEYMVLAS PSVPLLHLER PRCIGIFLDY bmy_19045T0/1-519 SRKGETTPSP ENGVWAMWLL KGSEYMVLAS PSVPLLHLER PRCIGIFLDY BACU002953/1-519 SRKGETTPSP ENGVWAMWLL KGSEYMVLAS PSVPLLHLER PRCIGIFLDY 451 500 ENSP00000355437/1-486 EAGEISFYNV TDGSYIYTFN QLFSGLLRPY FFICDATPLI LPPTTIAGSG ENSBTAP00000009824/1-487 EAGEISFYNI TNGSFIYTFN HLFSGFLRPY FFICDTTPLI LPPMTEVELE ENSTTRP00000014633/1-483 EAGEISFYNI THGSYIYTFN HLFSGFLRPY FFICDTAPLI LPPMTEVELE bmy_19045T0/1-519 EAGEISFYNI TNGSYIYTFN HLFSGFLRPY FFICDTTPLI LPPMTEVELE BACU002953/1-519 EAGEISFYNI TNGSYIYTFN HLFSGFLRPY FFICDTTPLI LPPMTEVELE 501 550 ENSP00000355437/1-486 NWASRDHLDP ASDVRDDHL ENSBTAP00000009824/1-487 NWTSRGHSDS ASDIRDDSS ENSTTRP00000014633/1-483 NWASRGHFHP ASNIRDDPS bmy_19045T0/1-519 NWASRGHFHP ASNITDDPS BACU002953/1-519 NWASRGHFHP ASNITDDPS