KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:29 2014 Check: 00 .. Name: ENSP00000434724/1-254 Len: 274 Check: 3293 Weight: 1.00 Name: ENSBTAP00000009837/1-248 Len: 274 Check: 2489 Weight: 1.00 Name: ENSTTRP00000003768/1-254 Len: 274 Check: 2658 Weight: 1.00 Name: BACU002291/1-210 Len: 274 Check: 8983 Weight: 1.00 Name: bmy_12311T0/1-241 Len: 274 Check: 3347 Weight: 1.00 // 1 50 ENSP00000434724/1-254 MNSRQAWRLF LSQGRGDRWV SRPRGHFSPA LRREFFTTTT KEGYDRRPVD ENSBTAP00000009837/1-248 MWGRWVRPLL RSE------V SSPCGRFSPA LRRDFFTTKT KEGYDMRRVD ENSTTRP00000003768/1-254 MWGRWLGRLL RSEGSGACRV STPRGRFSPA LRRDFFTTAT KEGYDTRPVD BACU002291/1-210 ---------- ---------- ---------- ---------- -----MRRVD bmy_12311T0/1-241 MGGNALEAKI YYK------- ------KNCL LFSDIFTTTT KEGYDMRRVD 51 100 ENSP00000434724/1-254 ITPLEQRKLT FDTHALVQDL ETHGFDKTQA ETIVSALTAL SNVSLDTIYK ENSBTAP00000009837/1-248 ITPLEQRELT FDTHALVLDL EAHGFDKAQA ETIVSALTTL SNVSLDTIYK ENSTTRP00000003768/1-254 ITPLEQRKLT FDTHALVQDL ETHGFDKAQA ETIVSALTIL SNVSLDTIYK BACU002291/1-210 ITPLEQRKLT FDTHALVQDL ETHGFDKAQA ETIVSALTIL SNVSLDTIYK bmy_12311T0/1-241 ITPLEQRKLT FDTHALVQDL ETHGFDKAQA ETIVSALTIL SNVSLDTIYK 101 150 ENSP00000434724/1-254 EMVTQAQQEI TVQQLMAHLD AIRKDMVILE KSEFANLRAE NEKMKIELDQ ENSBTAP00000009837/1-248 EMVTQAQQEI TVQQLMAHLD SIRKDMVILE KSEFANLRAE NQKMKIELEQ ENSTTRP00000003768/1-254 EMVTQAQQEI TVQQLMAHLD SIRKDMVILE KSEFANLRAE NQKMKIELEQ BACU002291/1-210 EMVTQAQQEI TVQQLMAHLD SIRKDMVILE KSEFANLRAE NQKMKIELEQ bmy_12311T0/1-241 EMVTQAQQEI TVQQLMAHLD SIRKDMVILE KSEFANLRAE NQKMKIELEQ 151 200 ENSP00000434724/1-254 VKQQLMHETS RIRADNKLDI NLERSRVTDM FTDQEKQLME TTTEFTKKDT ENSBTAP00000009837/1-248 VKQQLINETS RIRADNKLDI NLERSRVTDM FTDQEKKLME ATTEFTRNDT ENSTTRP00000003768/1-254 VKQQLINETS RIRADNKLDI NLERSRVTDM FTDQEKKLME ATTEFTKNDT BACU002291/1-210 VKQQLINETS RIRADNKLDI NLERSRVTDM ---------- --------DT bmy_12311T0/1-241 VKQQLINETS RIRADNKLDI NLERSRVTDM FTDQEKKLME ATTEFTKNDT 201 250 ENSP00000434724/1-254 QTKSIISETS NKIDAEIASL KTLMESNKLE TIRYLAA-SV FT-----CLA ENSBTAP00000009837/1-248 KTRGIISEIG NKIDTEIASL KTLMESNKLE TIRYLAA-SV FT-----CLA ENSTTRP00000003768/1-254 KTRGIISETG NKIDTEIASL KTLMESNKLE TIRYLAA-SV FT-----CLA BACU002291/1-210 KTRGIISETG NKIDTEIASL KTLMESNKLE TIRYLAGKAV FVRERNYCHL bmy_12311T0/1-241 KTRGIISETG NKIDTEIASL KTLMESNKLE TIRYLAA-SV FT-----CLA 251 300 ENSP00000434724/1-254 IALGF---YR F---WK---- ---- ENSBTAP00000009837/1-248 IALGF---YR L---WK---- ---- ENSTTRP00000003768/1-254 IALGF---YR L---WK---- ---- BACU002291/1-210 I-FGLISSYL LREPWGTEEK KEEL bmy_12311T0/1-241 IALGF---YR L---WK---- ----