KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:39:29 2014  Check: 00 ..

 Name: ENSP00000344942/1-251     Len:    256  Check:  473  Weight:  1.00
 Name: ENSBTAP00000009843/1-254  Len:    256  Check:  6225  Weight:  1.00
 Name: bmy_05757T0/1-256         Len:    256  Check:  9289  Weight:  1.00
 Name: ENSTTRP00000000148/1-256  Len:    256  Check:  8986  Weight:  1.00

//


                          1                                                   50
ENSP00000344942/1-251     MSGSNPKAAA AASAAGPGGL VAGKEEKKKA GGGVLNRLKA RRQAPHHAAD 
ENSBTAP00000009843/1-254  MSGSNSKAAA LGSAVGPAGL VTGKEEKKKA GGGVLNRLKG RRQAPHHAAD 
bmy_05757T0/1-256         MSGSNSKAAA VGSAAGPGGL VTGKEEKKKA GGGVLNRLKA RRQAPHHAAD 
ENSTTRP00000000148/1-256  MSGSNSKAAA VGSAAGPGGL VTGKEEKKKA GGGVLNRLKA RRQAPHHAAD 


                          51                                                 100
ENSP00000344942/1-251     DGVGAAVTEQ ELLALDTIRP EHVLRLSRVT ENYLCKPEDN IYSIDFTRFK 
ENSBTAP00000009843/1-254  DGIGAAVTEQ ELLALDTIRP EHVLRLSQVT ENYLCKPEDN IYSIDFTRFK 
bmy_05757T0/1-256         DGIGAAVTEQ ELLALDTIRP EHVLRLSRVT ENYLCKPEDN VYSIDFTRFK 
ENSTTRP00000000148/1-256  DGIGAAVTEQ ELLALDTIRP EHVLRLSRVT ENYLCKPEDN VYSIDFTRFK 


                          101                                                150
ENSP00000344942/1-251     IRDLETGTVL FEIAKPCVSD QEEDEEEG-- ---GGDVDIS AGRFVRYQFT 
ENSBTAP00000009843/1-254  IRDLETGTVL FEIAKPCVSD QEEEEDEEGE A--GGDVDVS AGRFVRYQFT 
bmy_05757T0/1-256         IRDLETGTVL FEIAKPCVSD QEEEEEEEEE EAAGGDVDVS AGRFVRYQFT 
ENSTTRP00000000148/1-256  IRDLETGTVL FEIAKPCVSD QEEEEEEAAA AAAGGDVDVS AGRFVRYQFT 


                          151                                                200
ENSP00000344942/1-251     PAFLRLRTVG ATVEFTVGDK PVSNFRMIER HYFREHLLKN FDFDFGFCIP 
ENSBTAP00000009843/1-254  PAFLRLRTVG ATVEFTVGDK PVSNFRMIER HYFRERLLKN FDFDFGFCIP 
bmy_05757T0/1-256         PAFLRLRTVG ATVEFTVGEK PVSNFRMIER HYFRERLLKN FDFDFGFCIP 
ENSTTRP00000000148/1-256  PAFLRLRTVG ATVEFTVGDK PVSNFRMIER HYFRERLLKN FDFDFGFCIP 


                          201                                                250
ENSP00000344942/1-251     SSRNTCEHIY EFPQLSEDVI RLMIENPYET RSDSFYFVDN KLIMHNKADY 
ENSBTAP00000009843/1-254  SSRNTCEHIY EFPQLSEDVI RLMIENPYET RSDSFYFVDN KLIMHNKADY 
bmy_05757T0/1-256         SSRNTCEHIY EFPQLSEDVI RLMIENPYET RSDSFYFVDN KLIMHNKADY 
ENSTTRP00000000148/1-256  SSRNTCEHIY EFPQLSEDVI RLMIENPYET RSDSFYFVDN KLIMHNKADY 


                          251                                                300
ENSP00000344942/1-251     AYNGGQ 
ENSBTAP00000009843/1-254  AYNGGQ 
bmy_05757T0/1-256         AYNGGQ 
ENSTTRP00000000148/1-256  AYNGGQ