KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:39 2014 Check: 00 .. Name: ENSBTAP00000009888/1-407 Len: 417 Check: 8375 Weight: 1.00 Name: bmy_05338T0/1-408 Len: 417 Check: 8441 Weight: 1.00 Name: ENSP00000219345/1-412 Len: 417 Check: 7899 Weight: 1.00 Name: BACU018784/1-370 Len: 417 Check: 9766 Weight: 1.00 Name: ENSTTRP00000003415/1-408 Len: 417 Check: 7405 Weight: 1.00 // 1 50 ENSBTAP00000009888/1-407 MG-CLCLYRS TLLTGGLLFL L----MLADP AFPAGSRPPV VLVPGDMGNQ bmy_05338T0/1-408 MGLRLCPYRA ALLPSGLLLL L----MLTVA ALPAGRPPPV VLVPGDLGNQ ENSP00000219345/1-412 MGLHLRPYRV GLLPDGLLFL LLLLMLLADP ALPAGRHPPV VLVPGDLGNQ BACU018784/1-370 ---------- ---------- ---------- ---------- --VPGDLGNQ ENSTTRP00000003415/1-408 MGLRLCPYRA ALLPSGLLLL L----MLTDL ALPAGRPPPV VLVPGDLGNQ 51 100 ENSBTAP00000009888/1-407 LEAKLDKPSV VHYVCSKRTD HYFTLWLNLE LLLPVIIDCW IDNVRLIY-- bmy_05338T0/1-408 LEAKLDKPTV VHYLCSKRTD SYFTLWLNLE LLLPVIIDCW IDNIRPSHWS ENSP00000219345/1-412 LEAKLDKPTV VHYLCSKKTE SYFTIWLNLE LLLPVIIDCW IDNIRLVY-- BACU018784/1-370 LEAKLDKPTV VHYLCSKRTD SYFTLWLNLE LLLPVIIDCW IDNIRLVY-- ENSTTRP00000003415/1-408 LEAKLDKPTV VHYLCSKRTD SYFTLWLNLE LLLPVIIDCW IDNIRLVY-- 101 150 ENSBTAP00000009888/1-407 NQTSHTTQFP EGVDVRVPGF GDTFS---ME FLDPSKSSVG SYLHTMVESL bmy_05338T0/1-408 SWTPAKAVWV CSPSSWPPGN GDGGSDGLRE WEEPC----- SYFHTMVENL ENSP00000219345/1-412 NKTSRATQFP DGVDVRVPGF GKTFS---LE FLDPSKSSVG SYFHTMVESL BACU018784/1-370 NRTSRTTQFP DGVDVRVPGF GKTFS---LE FLDPSKSSVG SYFHTMVENL ENSTTRP00000003415/1-408 NRTSRTTQFP DGVDVRVPGF GKTFS---LE FLDPSKSSVG SYFHTMVESL 151 200 ENSBTAP00000009888/1-407 VSWGYERGKD VRGAPYDWRR APNENGPYFL ALRKMIEEMY QLYGGPVVLV bmy_05338T0/1-408 VGWGYTRGED VRGAPYDWRR APNENGPYFL ALREMIEEMH QLYGGPVVLA ENSP00000219345/1-412 VGWGYTRGED VRGAPYDWRR APNENGPYFL ALREMIEEMY QLYGGPVVLV BACU018784/1-370 VGWGYTRGED VRGAPYDWRR APNENGPYFL ALREMIEEMH QLYGGPVVLA ENSTTRP00000003415/1-408 VGWGYTRGED VRGAPYDWRR APNENGPYFL ALREMIEEMH QLYGGPVVLA 201 250 ENSBTAP00000009888/1-407 AHSMGNMYML YFLQHQPQDW KDKYIRAFVA LGPPWGGVPK TLRVLASGDN bmy_05338T0/1-408 AHSMGNMYTL YFLQQQPQAW KDKYIHAFVA LGPPWGGVAK TLRVLASGDN ENSP00000219345/1-412 AHSMGNMYTL YFLQRQPQAW KDKYIRAFVS LGAPWGGVAK TLRVLASGDN BACU018784/1-370 AHSMGNMYTL YFLQQQPQAW KDKYIHAFVA LGPPWGGVAK TLRVLASGDN ENSTTRP00000003415/1-408 AHSMGNMYTL YFLQQQPQAW KDKYIHAFVA LGPPWGGVAK TLRVLASGDN 251 300 ENSBTAP00000009888/1-407 NRIPVIRSLK IRAQQRSAVS TTWLLPYSYT WSPQKVFVRT PKANYTLQDY bmy_05338T0/1-408 NRIPVIGPLK IREQQRSAVS TSWLLPYNYT WSPKKVFVHT PTANYTLQDY ENSP00000219345/1-412 NRIPVIGPLK IREQQRSAVS TSWLLPYNYT WSPEKVFVQT PTINYTLRDY BACU018784/1-370 NRIPVIGPLK IREQQRSAVS TSWLLPYNYT WSPKKVFVHT PTANYTLQDY ENSTTRP00000003415/1-408 NRIPVIGPLK IREQQRSAVS TSWLLPYNYT WSPKKVFVHT PTANYTLQDY 301 350 ENSBTAP00000009888/1-407 RQFFQDIGFK DGWSMRQDTE GLVEATVPPG VRLHCLYGTG VPTPESFDYE bmy_05338T0/1-408 RRFFQDIGFE DGWLMRQDTE GLVEAMVPPG VRLHCLYGTG VPTPDSFYYE ENSP00000219345/1-412 RKFFQDIGFE DGWLMRQDTE GLVEATMPPG VQLHCLYGTG VPTPDSFYYE BACU018784/1-370 RRFFQDIGFE DGWLMRQDTE GLVEAMVPPG VRLHCLYGTG VPTPDSFYYE ENSTTRP00000003415/1-408 RRFFQDIGFE DGWLMRQDTE GLVEAMVPPG VRLHCLYGTG VPTPDSFYYE 351 400 ENSBTAP00000009888/1-407 SFPDRDPKIH YGTGDGTVNL QSALHCHTWR GLQKQEVSLQ ALPGNEHIAM bmy_05338T0/1-408 SFPDRDPKIC FGDGDGTVNL QSALQCQAWR GRQEQEVSLQ ALPGTEHIAM ENSP00000219345/1-412 SFPDRDPKIC FGDGDGTVNL KSALQCQAWQ SRQEHQVLLQ ELPGSEHIEM BACU018784/1-370 SFPDRDPKIC FGDGDGTVNL QSALQCQAWR GRQEQKVSLQ ALPGTEHIAM ENSTTRP00000003415/1-408 SFPDRDPKIC FGDGDGTVNL QSALQCQAWR GHQEQEVSLQ ALPGTEHIAM 401 450 ENSBTAP00000009888/1-407 LANTTTLAYL KRVLLGP bmy_05338T0/1-408 LANATTLAYL KRVLLGP ENSP00000219345/1-412 LANATTLAYL KRVLLGP BACU018784/1-370 LANATTLAYL KRVLLGP ENSTTRP00000003415/1-408 LANATTLAYL KRVLLGP