KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:40 2014 Check: 00 .. Name: ENSP00000357461/1-502 Len: 502 Check: 8715 Weight: 1.00 Name: ENSBTAP00000009892/1-501 Len: 502 Check: 3266 Weight: 1.00 Name: ENSTTRP00000013276/1-502 Len: 502 Check: 7779 Weight: 1.00 Name: bmy_09708T0/1-502 Len: 502 Check: 6153 Weight: 1.00 Name: BACU007472/1-392 Len: 502 Check: 3343 Weight: 1.00 // 1 50 ENSP00000357461/1-502 MARRCGPVAL LLGFGLLRLC SGVWGTDTEE RLVEHLLDPS RYNKLIRPAT ENSBTAP00000009892/1-501 MAWLSGPKAM LLSFGLLGLC SGVWGTDTEE RLVEHLLDPS RYNKLIRPAT ENSTTRP00000013276/1-502 MAWRSGPMAL LLSFGLLGLC SGVCGTDTEE RLVEHLLDPS RYNKLIRPAT bmy_09708T0/1-502 MAWRSGPMAL LLSFGLLGLC SGVCGTDTEE RLVEHLLDPS RYNKLIRPAT BACU007472/1-392 MAWRSGPMAL LLSFGLLGLC SGVCGTDTEE RLVEHLLDPS RYNKLIRPAT 51 100 ENSP00000357461/1-502 NGSELVTVQL MVSLAQLISV HEREQIMTTN VWLTQEWEDY RLTWKPEEFD ENSBTAP00000009892/1-501 NGSELVTVQL MVSLAQLISV HEREQIMTTN VWLTQEWEDY RLTWKPEEFD ENSTTRP00000013276/1-502 NGSELVTVQL MVSLAQLISV HEREQIMTTN VWLTQEWEDY RLTWKPEEFD bmy_09708T0/1-502 NGSELVTVQL MVSLAQLISV HEREQIMTTN VWLTQEWEDY RLTWKPEEFD BACU007472/1-392 NGSELVTVQL MVSLAQLISV HEREQIMTTN VWLTQEWEDY RLTWKPEEFD 101 150 ENSP00000357461/1-502 NMKKVRLPSK HIWLPDVVLY NNADGMYEVS FYSNAVVSYD GSIFWLPPAI ENSBTAP00000009892/1-501 NMKKVRLPSK HIWLPDVVLY NNADGMYEVS FYSNAVVSYD GSIFWLPPAI ENSTTRP00000013276/1-502 NMKKVRLPSK HIWLPDVVLY NNADGMYEVS FYSNAVVSYD GSIFWLPPAI bmy_09708T0/1-502 NMKKVRLPSK HIWLPDVVLY NNADGMYEVS FYSNAVVSYD GSIFWLPPAI BACU007472/1-392 NMKKVRLPSK HIWLPDVVLY NNADGMYEVS FYSNAVVSYD GSIFWLPPAI 151 200 ENSP00000357461/1-502 YKSACKIEVK HFPFDQQNCT MKFRSWTYDR TEIDLVLKSE VASLDDFTPS ENSBTAP00000009892/1-501 YKSACKIEVK HFPFDQQNCT MKFRSWTYDR TEIDLVLKSD VANLDDFTPS ENSTTRP00000013276/1-502 YKSACKIEVK HFPFDQQNCT MKFRSWTYDR TEIDLVLKSD VASLDDFTPS bmy_09708T0/1-502 YKSACKIEVK HFPFDQQNCT MKFRSWTYDR TEIDLVLKSD VASLDDFTPS BACU007472/1-392 YKSACKIEVK HFPFDQQNCT MKFRSWTYDR TEIDLVLKSD VASLDDFTPS 201 250 ENSP00000357461/1-502 GEWDIVALPG RRNENPDDST YVDITYDFII RRKPLFYTIN LIIPCVLITS ENSBTAP00000009892/1-501 GEWDIVALPG RRNENPDDST YVDITYDFII RRKPLFYTIN LIIPCVLITS ENSTTRP00000013276/1-502 GEWDIVALPG RRNENPDDST YVDITYDFII RRKPLFYTIN LIIPCVLITS bmy_09708T0/1-502 GEWDIVALPG RRNENPDDST YVDITYDFII RRKPLFYTIN LIIPCVLITS BACU007472/1-392 GEWDIVALPG RRNENPDDST YVDITYDFII RRKPLFYTIN LIIPCVLITS 251 300 ENSP00000357461/1-502 LAILVFYLPS DCGEKMTLCI SVLLALTVFL LLISKIVPPT SLDVPLVGKY ENSBTAP00000009892/1-501 LAILVFYLPS DCGEKMTLCI SVLLALTVFL LLISKIVPPT SLDVPLVGKY ENSTTRP00000013276/1-502 LAILVFYLPS DCGEKMTLCI SVLLALTVFL LLISKIVPPT SLDVPLVGKY bmy_09708T0/1-502 LAILVFYLPS DCGEKMTLCI SVLLALTVFL LLISKIVPPT SLDVPLVGKY BACU007472/1-392 LAILVFYLPS DCGEKMTLCI SVLLALTVFL LLISKIVPPT SLDVPLVGKY 301 350 ENSP00000357461/1-502 LMFTMVLVTF SIVTSVCVLN VHHRSPTTHT MAPWVKVVFL EKLPALLFMQ ENSBTAP00000009892/1-501 LMFTMVLVTF SIVTSVCVLN VHHRSPTTHT MAPWVKVVFL EKLPTLLFMQ ENSTTRP00000013276/1-502 LMFTMVLVTF SIVTSVCVLN VHHRSPTTHT MAPWVKVIFL EKLPKLLFMQ bmy_09708T0/1-502 LMFTMVLVTF SIVTSVCVLN VHHRSPTTHT MAPWVKVIFL EKLPTLLFMQ BACU007472/1-392 LMFTMVLVTF SIVTSVCVLN VHHRSPTTHT MAPWVK---- ---------- 351 400 ENSP00000357461/1-502 QPRHHCARQR LRLRRRQRER EGAGALFFRE APGADSCTCF VNRASVQGLA ENSBTAP00000009892/1-501 QPRHRCARQR LRLRRRQRER EGAGALF-RE ALGADSCTCF VNRASVQGLA ENSTTRP00000013276/1-502 QPRHRCARQR LRLRRRQRGR EGTGAVFYRE ALGADSCTCF VNRASVQGLA bmy_09708T0/1-502 QPRHRCARQR LRLRRCQRGL EGAGALFFRE ALGADSCTCF VNRASVQGLA BACU007472/1-392 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000357461/1-502 GAFGAEPAPV AGPGRSGEPC GCGLREAVDG VRFIADHMRS EDDDQSVSED ENSBTAP00000009892/1-501 GAFGSEPAPA AGPGRARGPC GCGLREAVDG VRFIADHMRS EDDDQSVSED ENSTTRP00000013276/1-502 GAFGSEPAPA AGPGRSGGPC GCGLREAVDG VRFIADHMRS EDDDQSVSED bmy_09708T0/1-502 GAFGSEPAPA TGPGRSGGQC GCGLREAVDG VRFIADHMRS EDDDQSVSED BACU007472/1-392 ---------- ---------- ---------- ---------- ------VSED 451 500 ENSP00000357461/1-502 WKYVAMVIDR LFLWIFVFVC VFGTIGMFLQ PLFQNYTTTT FLHSDHSAPS ENSBTAP00000009892/1-501 WKYVAMVIDR LFLWIFVFVC VFGTIGMFLQ PLFQNYATAT FLHADHSAPS ENSTTRP00000013276/1-502 WKYVAMVIDR LFLWIFVFVC VFGTIGMFLQ PLFQNYTTAT FLHADHSAPS bmy_09708T0/1-502 WKYVAMVIDR LFLWIFVFVC VFGTIGMFLQ PLFQNYTTAT FLHADNSAPS BACU007472/1-392 WKYVAMVIDR LFLWIFVFVC VFGTIGMFLQ PLFQNYTTAT FLHADNSAPS 501 550 ENSP00000357461/1-502 SK ENSBTAP00000009892/1-501 SK ENSTTRP00000013276/1-502 SK bmy_09708T0/1-502 SK BACU007472/1-392 SK