KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:40 2014 Check: 00 .. Name: ENSP00000453177/1-500 Len: 579 Check: 6765 Weight: 1.00 Name: ENSBTAP00000009893/1-502 Len: 579 Check: 3824 Weight: 1.00 Name: ENSTTRP00000003187/1-496 Len: 579 Check: 3895 Weight: 1.00 Name: bmy_12685T0/1-511 Len: 579 Check: 6853 Weight: 1.00 Name: BACU002846/1-547 Len: 579 Check: 688 Weight: 1.00 // 1 50 ENSP00000453177/1-500 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009893/1-502 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003187/1-496 ---------- ---------- ---------- ---------- ---------- bmy_12685T0/1-511 ---------- ---------- ---------- ---------- ---------- BACU002846/1-547 MVTARSSTQL SQTNPTGSLR LQKFSSGKGV ACEMKHQTFF QASLSLLIPE 51 100 ENSP00000453177/1-500 ---------- ----MEVSTN PSS--NIDPG DYVEMNDSIT HLPSKVVIQD ENSBTAP00000009893/1-502 ---------- ----MEVSSN LSSKTDTDSD SYAEVNDVIT QISSKVQIQD ENSTTRP00000003187/1-496 ---------- ----MEVSSN PSV--NIDPD NYVEVNDFIT QIPSKVQIQD bmy_12685T0/1-511 ---------- ------VSSN PSV--NIDPD NYVEVNDFIT QIPSKAQIQD BACU002846/1-547 QRQALSMAGA QMRQKRVSSN PSV--NIDPD NYVEVNDFIT QIPSKAQIQD 101 150 ENSP00000453177/1-500 ITMELHCPLC NDWFRDPLML SCGHNFCEAC IQDFWRLQAK ETFCPECKML ENSBTAP00000009893/1-502 ITTELHCPLC NDWFRDALML SCGHNFCQSC IQNFWKQQAN ETFCPECKML ENSTTRP00000003187/1-496 ITMELHCPLC NDWFCDPLML SCGHNFCQSC IQNFWKQQAQ ETFCPECKML bmy_12685T0/1-511 ITMELHCPLC NDWFRDPLML SCGHNFCQSC IQNFWKQQAK ETFCPECKML BACU002846/1-547 ITMELHCPLC NDWFRDPLML SCGHNFCQSC IQNFWKQQAK ETFCPECKML 151 200 ENSP00000453177/1-500 CQYNNCTFNP VLDKLVEKIK KLPLLKGHPQ CPEHGENLKL FSKPDGKLIC ENSBTAP00000009893/1-502 CQYSNCTFNL VLEKLVEKIK KLPLLKGHPR CPEHGENLKL FSKPDGRLIC ENSTTRP00000003187/1-496 CQYSNCTFNL VLEKL-EKIK KLPLFKGHPQ CPEHGENLKL FSKPDRKLIC bmy_12685T0/1-511 CQYSNCTFNL VLEKLVEKIK KLPLLKGHPQ CPEHGENLKL FSKPDGKLIC BACU002846/1-547 CQYSNCTFNL VLEKLVEKIK KLPLLKGHPQ CPEHGENLKL FSKPDGKLIC 201 250 ENSP00000453177/1-500 FQCKDARLSV GQSKEFLQIS DAVHFFTEEL AIQQGQLETT LKELQTLRNM ENSBTAP00000009893/1-502 FQCKDARLSV GQSKEFLQIS DAVHFFTEEL TIHQGQLEAT LKELQSLKNM ENSTTRP00000003187/1-496 FQCKDVRLSV GQSNEFLQIS DAVRFFTEEL TIHQGQLEAT LKELQSLRNM bmy_12685T0/1-511 FQCKDARLSV GQSKEFLQIS DAVRFFTEEL TIHQGQLEAT LKELQSLRNM BACU002846/1-547 FQCKDARLSV GQSKEFLQIS DAVRFFTEEL TIHQGQLEAT LKELQFLRNM 251 300 ENSP00000453177/1-500 QKEAIAAHKE NKLHLQQHVS MEFLKLHQFL HSKEKDILTE LREEGKALNE ENSBTAP00000009893/1-502 QKDAIAAHKE NKLHLQQHIS LEFLKLHQFL HSKEKDLLSE LREEGKALNE ENSTTRP00000003187/1-496 QRDAIAAHKE NKLHLQQHIS SEVLKLHQFL HSKEKDALNE LREEGKALNE bmy_12685T0/1-511 QKDAIAAHKE NKLHLQQHIS LEFLKLHQFL HSKEKDALNE LREEGKALNE BACU002846/1-547 QKDAIAAHKE NKLHLQQHIS LEFLKLHQFL HSKEKDALNE LREEGKALNE 301 350 ENSP00000453177/1-500 EMELNLSQLQ EQCLLAKDML VSIQAKTEQQ NSFDFLK--- --DIT----- ENSBTAP00000009893/1-502 EMELNLSHIQ EQCLLAKEML VSIQARMEQQ NPFDFLK--- --DIT----- ENSTTRP00000003187/1-496 EMELNLSHIQ EQCLLAREML VSIQARMEQQ NSFDFLK--- --DII----- bmy_12685T0/1-511 EMELNLSHIQ EQCLLAKEML VSIQARMEQQ NSFDFLKVRL HTNMTMGTIE BACU002846/1-547 EMELNLSHIQ EQCLLAKEML ---------- ---------- --DIT----- 351 400 ENSP00000453177/1-500 ---TLLHSLE QGMKVLATRE LISRKLNLGQ YKGPIQYMVW REMQDTLCPG ENSBTAP00000009893/1-502 ---PLLDSLE QGMRMLTPKE LVSRKLSPGV FKGPIQYTIW RDMQSTLSPG ENSTTRP00000003187/1-496 ---PLLDSLE QGMRVLTPRE LISRKLNPGL FKGPIQYMMW REMQSTLSPG bmy_12685T0/1-511 GERGLERILE QGMRVLTPRE LISRKLNPGL FRGPIQYMMW REMQSTLSPG BACU002846/1-547 ---PLLDSLE QGMRVLTPRE LISRKLNPGL FRGPIQYMMW REMQSTLSPG 401 450 ENSP00000453177/1-500 LSPLTLDPKT AHPNLVLSKS QTSVWHGDIK KIMPDDPERF DSSVAVLGSR ENSBTAP00000009893/1-502 LSPLTLDPKT AHPNLVLSKN RTSVWHGDIK QLMPDDPERF DSSVAVLGSK ENSTTRP00000003187/1-496 LSPLTLDPKT AHPNLVLSKN QTSVWHGDMK QVMPDDPERF DSSVAVLGSK bmy_12685T0/1-511 LSPLTLDPKT AHPNLVLSKN RTSVWHGDIK QVMPDDPERF DSSVAVLGSK BACU002846/1-547 LSPLTLDPKT AHPNLVLSKN RTSVWHGDIK QVMPDDPERF DSSVAVLGSK 451 500 ENSP00000453177/1-500 GFTSGKWYWE VEVAKKTKWT VGVVRESIIR KGSCPLTPEQ GFWLLRLRNQ ENSBTAP00000009893/1-502 GFTSGKWYWE VEVAKKTKWT VGVVRESILR KGSCPLTPEQ GFWLLRLRNQ ENSTTRP00000003187/1-496 GFTSGRWYWE VEVAKKTKWT VGVVRESILR KGSCPLTPEQ GFWLLRLRNQ bmy_12685T0/1-511 GFTSGRWYWE VEVAKKTKWT VGVVRESILR KGSCPLTPEQ GFWLLRLRNQ BACU002846/1-547 GFTSGRWYWE VEVAKKTKWT VGVVRESILR KGSCPLTPEQ GFWLLRLRNQ 501 550 ENSP00000453177/1-500 TDLKALDLPS FSLTLTNNLD KVGIYLDYEG GQLSFYNAKT MTHIYTFSNT ENSBTAP00000009893/1-502 TDLKALDFPS CSLKLTNNLN KVGIYLDYEG GQVSFYNAKT MTHIYTFSSV ENSTTRP00000003187/1-496 TDLKALDLPS CSMKLTNNLN KVGIYLDYEG GQVSFYNAKT MTHIYTFSST bmy_12685T0/1-511 TDLKALDLPS CSLKLTNNLN KVGIYLDYEG GQVSFYNAKT MTHIYTFSST BACU002846/1-547 TDLKALDLPS CSLKLTNNLN KVGIYLDYEG GQVSFYNAKT MTHIYTFSST 551 600 ENSP00000453177/1-500 FMEKLYPYFC PCLNDGGENK EPLHILHPQ ENSBTAP00000009893/1-502 FMEKLYPYFC PCLNDGGENK EPLHILHPQ ENSTTRP00000003187/1-496 FMEKLYPYFC PCLNDGGENK EPLHIL--- bmy_12685T0/1-511 FMEKLYPYFC PCLNDGGENK EPLHILHPQ BACU002846/1-547 FMEKLYPYFC PCLNDGGENK EPLHILHPQ