KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:42 2014 Check: 00 .. Name: ENSTTRP00000013279/1-1260 Len: 1277 Check: 3325 Weight: 1.00 Name: ENSP00000357459/1-1226 Len: 1277 Check: 9139 Weight: 1.00 Name: ENSBTAP00000009896/1-1176 Len: 1277 Check: 8356 Weight: 1.00 Name: bmy_09709T0/1-1172 Len: 1277 Check: 3404 Weight: 1.00 Name: BACU007471/1-1092 Len: 1277 Check: 3963 Weight: 1.00 // 1 50 ENSTTRP00000013279/1-1260 MMSPIRDRAI DSRLKVERAT WWGRGEGSRR QWQSGVALCP RELQDPGCSL ENSP00000357459/1-1226 ---------M NPR------- ---------- ---------- -----QGYSL ENSBTAP00000009896/1-1176 ---------- ---------- ---------- ---------- -VLVLQGYSL bmy_09709T0/1-1172 ----GRDRLA AAV------- ---------- ----PIHFLF HLLVLQGCSL BACU007471/1-1092 MMSPIRDRAI DSR------- ---------- ---------- ----LKGCSL 51 100 ENSTTRP00000013279/1-1260 NRYQTHPVQG YEHSKLRHQQ PGLGSYPNSF QLQQIEFLKG QLPEAPLIGK ENSP00000357459/1-1226 SGYYTHPFQG YEHRQLRYQQ PGPGSSPSSF LLKQIEFLKG QLPEAPVIGK ENSBTAP00000009896/1-1176 NRYQARPAQG YEHSRHRHQQ PERGPCRDSF QLQQIEFLKG QLPEVPLFGK bmy_09709T0/1-1172 NRYQTHPVQG YEHSKLRHQQ PGLGSYPNSF QLQQIEFLKG QLPEAPLIGK BACU007471/1-1092 NRYQTHPVQG YEHSKLRHQQ PGLGSYPNSF QLQQIEFLKG QLPEAPLIGK 101 150 ENSTTRP00000013279/1-1260 QAPSLPLFLP GLGPRFP--- GPPARGGYLQ IPGVPRGVPL RSQVLPGGFQ ENSP00000357459/1-1226 QTPSLPPSLP GLRPRFPVLL ASSTRGRQVD IRGVPRGVHL RSQGLQRGFQ ENSBTAP00000009896/1-1176 QPPSLPPFLP GLWPRFP--- GPPARGGPLQ IRGVPRGVPL RSQVLPRRFQ bmy_09709T0/1-1172 QAPLLPLFLP GLRLGFP--- GPPARGGYFE IPGVPRGVPL RSQVLPRGFQ BACU007471/1-1092 Q--------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000013279/1-1260 HPTPRGWVQP WRGVDRLSSR FQELTISQNQ EQRILELLKE LGEGKATTAL ENSP00000357459/1-1226 HPSPRGRSLP QRGVDCLSSH FQELSIYQDQ EQRILKFLEE LGEGKATTAH ENSBTAP00000009896/1-1176 RPFPRGHIRP WRGVDRLSSH FQGLTISQDQ EQRTLELLDE LGDGKATTAR bmy_09709T0/1-1172 HPFPRGQVRP WSGVDRLSAR FRELTISQDQ EQRILELLEE LGEGKATTAH BACU007471/1-1092 ---------- ---------- --ELTISQDQ EQRILKLLAE LGEGKATTAH 201 250 ENSTTRP00000013279/1-1260 DLARKLQAQK KEINQVLYSL AKKGKLHREA GTPPLWRISV PV-ARNQPSQ ENSP00000357459/1-1226 DLSGKLGTPK KEINRVLYSL AKKGKLQKEA GTPPLWKIAV STQAWNQHSG ENSBTAP00000009896/1-1176 DLARKLQAPK KDINRVLYSL AEKGKLHQEA GSPPLWRATV PVQAQNQPSQ bmy_09709T0/1-1172 DLAXKLQAQK KEINQVLYSL AKKGKLHREA GTPPLWRLSV PVQAWNQPSQ BACU007471/1-1092 DLAGKLQAQK KEINRVLYSL AKKGKLHREA GTPPLWRLSV PVQAWNQPSQ 251 300 ENSTTRP00000013279/1-1260 VARADSHSQG APSSDFSLET EDS----LTS GLXXXXXXXX XXXXXXXXXX ENSP00000357459/1-1226 VVRPDGHSQG APNSDPSLEP EDRNSTSVSE DLLEPFIAVS AQAWNQHSGV ENSBTAP00000009896/1-1176 ETRAESQTPG APSPDSSVET EGR------- ---------- ---------- bmy_09709T0/1-1172 VARADSHSRG APSSDFSLET EDR------- ---------- ---------- BACU007471/1-1092 VARADSHSQG APSSDFSLET EDR------- ---------- ---------- 301 350 ENSTTRP00000013279/1-1260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357459/1-1226 VRPDSHSQGS PNSDPGLEPE DSNSTSALED PLEFLDMAEI KEKICDYLFN ENSBTAP00000009896/1-1176 ---------- ---------- --STPCGLEE PPEPLDMAEI KEKICDHLFN bmy_09709T0/1-1172 ---------- ---------- --SFTSGLED PSEPLDMAEI KERICDYLFN BACU007471/1-1092 ---------- ---------- --SFTSGLED PPEPLDMAEI KEKICDYLFN 351 400 ENSTTRP00000013279/1-1260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357459/1-1226 VSDSSALNLA KNIGLTKARD INAVLIDMER QGDVYRQGTT PPIWHLTDKK ENSBTAP00000009896/1-1176 VSSSSALNLA KNIGLTKARD VNAVLIDLER QGDVYRQGTT PPIWYLTDKK bmy_09709T0/1-1172 VSSSSALNLA KNIGFTKARD VTAMLIDLER QGDVYRQGTT PPIWHLTDKK BACU007471/1-1092 VSSSSALNLA KNIGFTKARD VTAVLIDLER QGDVYRQGTT PPIWHLTDKK 401 450 ENSTTRP00000013279/1-1260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357459/1-1226 RERMQIKRNT NSVPETAP-A AIPETKRNAE FLTCNIPTSN ASNNMVTTEK ENSBTAP00000009896/1-1176 RERIQIKRNK DSVPETTQAA AVLETGKTTE GPTCNSPASD ASNSTVTPGK bmy_09709T0/1-1172 RERIQIKRNT NSVPETTQ-A AIQETRKIAE LPTCNLPASD ASNSMVTTEK BACU007471/1-1092 RERIQIKRNA NNVPETTQ-A AIQETRKIAD LPTCNLPASD ASNSMVTTEK 451 500 ENSTTRP00000013279/1-1260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357459/1-1226 VENGQEPVIK LENRQEARPE PARL--KPPV HYNGPSKAGY VDFENGQWAT ENSBTAP00000009896/1-1176 VENGQEPVVK LKLKQEATAE PVKL--KPPV YDNGPSKTGY VDFENGQWAT bmy_09709T0/1-1172 VENGQEPVVK LETRQEVTPE PIKLKPKPPV HDNGPSKTGY VDFENGQWAT BACU007471/1-1092 VENGQEPVVK LETRQEVTPE PIKLKPKPPV HDNGPSKTGY VDFENGQWAT 501 550 ENSTTRP00000013279/1-1260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXPIS ENSP00000357459/1-1226 DDIPDDLNSI RAAPGEFRAI MEMPSFYSHG LPRCSPYKKL TECQLKNPIS ENSBTAP00000009896/1-1176 DDIPDDLNSI HAAPGEFRAI MEMPSFYSHG LPRCSPYKKL TECQLKNPIS bmy_09709T0/1-1172 DDIPDDLNSI HAAPGEFRAI MEMPSFYSHG LPRCSPYKKL AECQLKNPIS BACU007471/1-1092 DDIPDDLNSI HAAPGEFRAI MEMPSFYSHG LPRCSPYKKL AECQLKNPIS 551 600 ENSTTRP00000013279/1-1260 GLL-YAQFAS QTCEFN-IEQ SGPPHEPRFK FQVVISGREF PPAEAGSKKV ENSP00000357459/1-1226 GLLEYAQFAS QTCEFNMIEQ SGPPHEPRFK FQVVINGREF PPAEAGSKKV ENSBTAP00000009896/1-1176 GLLEYAQFAS QTCEFNMIEQ SGPPHEPRFK FQVVINGREF PPAEAGSKKV bmy_09709T0/1-1172 GLLEYAQFAS QTCEFNLIEQ SGPPHEPRFK FQVVISGREF PPAEAGSKKV BACU007471/1-1092 GLLEYAQFAS QTCEFNLIEQ SGPPHEPRFK FQVVISGREF PPAEAGSKKV 601 650 ENSTTRP00000013279/1-1260 AKQDAAMKAM TILLEEAKAK DSGRSEESYY CSSEKESEKT AESQTTTPSA ENSP00000357459/1-1226 AKQDAAMKAM TILLEEAKAK DSGKSEESSH YSTEKESEKT AESQTPTPSA ENSBTAP00000009896/1-1176 AKQDAAMKAM TILLEEAKAK DSGRSEESYH YSSEKESEKT AESQTATPSA bmy_09709T0/1-1172 AKQDAAMKAM TILLEEAKAK DSGRSEESYY CSSKKESEKT AESQTTTPSA BACU007471/1-1092 AKQDAAMKAM TILLEEAKAK DSGRSEESYY CSSKKESEKT AESQTTTPSA 651 700 ENSTTRP00000013279/1-1260 TSFLSGKNPV TTLLECVHKL GSSCEFRLLS REGPAHDPK- -----FQYCV ENSP00000357459/1-1226 TSFFSGKSPV TTLLECMHKL GNSCEFRLLS KEGPAHEPK- -----FQYCV ENSBTAP00000009896/1-1176 TSFLSGKNPV TTLLECVHKL GSSCEFRLLS REGPAHDPK- -----FQYCV bmy_09709T0/1-1172 TSFLSGKNPV TTLLECVHKL GSSCEFRLLS REGPAHDPKY ISCIMFQYCV BACU007471/1-1092 TSFLSGKNPV TTLLECVHKL GSSCEFRLLS REGPAHDPK- -----FQYCV 701 750 ENSTTRP00000013279/1-1260 AMGTHTFPTA SAPSKKAAKQ MAAEEAMKAL QGEATGSTSS DDQPGSMNTE ENSP00000357459/1-1226 AVGAQTFPSV SAPSKKVAKQ MAAEEAMKAL HGEATNSMAS DNQPEGMISE ENSBTAP00000009896/1-1176 AMGTHTFPTA SAPSKKAAKQ MAAEEAMKAL QGEATSSTSS EDQPGSTNTE bmy_09709T0/1-1172 AMGAHTFPTA SAPSKKVAKQ MAAEEAMKAL QGEATSSTSS DDQPGSMNTE BACU007471/1-1092 AMGTHTFPTA SAPSKKAAKQ MAAEEAMKAL QGEATSSTSS DDQPGSMNTE 751 800 ENSTTRP00000013279/1-1260 SFDNLESVMP SKVRRISELV RYLNTNPVGG LLEYARSHGF AAEFKLVDQS ENSP00000357459/1-1226 SLDNLESMMP NKVRKIGELV RYLNTNPVGG LLEYARSHGF AAEFKLVDQS ENSBTAP00000009896/1-1176 AFDNLESVMP NKVRRISELV RYLNTNPVGG LLEYARSHGF AAEFKLVDQS bmy_09709T0/1-1172 SFDNLESVMP TKVRRISELV RYLNTNPVGG LLEYARSHGF AAEFKLVDQS BACU007471/1-1092 SFDNLESVMP NKVRRISELV RYLNTNPVGG LLEYARSHGF AAEFKLVDQS 801 850 ENSTTRP00000013279/1-1260 GPPHEPKFVY QAKVGGRWFP AVCAHSKKQG KQEAADAALR VLIGEDEKAE ENSP00000357459/1-1226 GPPHEPKFVY QAKVGGRWFP AVCAHSKKQG KQEAADAALR VLIGENEKAE ENSBTAP00000009896/1-1176 GPPHEPKFVY QAKVGGRWFP AVCAHSKKQG KQEAADAALR VLIGEDEKAE bmy_09709T0/1-1172 GPPHEPKFVY QAKVGGRWFP AVCAHSKKQG KQEAADAALR VLIGEDEKAE BACU007471/1-1092 GPPHEPKFVY QAKVGGRWFP AVCAHSKKQG KQEAADAALR VLIGEDEKAE 851 900 ENSTTRP00000013279/1-1260 RMGFTEVTPV TGASLRRTML LLSRSPEAQP KT-LPLTGST FHDQIAMLSH ENSP00000357459/1-1226 RMGFTEVTPV TGASLRRTML LLSRSPEAQP KT-LPLTGST FHDQIAMLSH ENSBTAP00000009896/1-1176 RMGFTEVTPV TGASLRRTML LLSRSPEAKR KTELPLTGST FHDQIAMLSH bmy_09709T0/1-1172 RMGFTE---- ---------- ---------- ---LPLTGST FHDQIAMLSH BACU007471/1-1092 RMGFTE---- ---------- ---------- ---LPLTGST FHDQIAMLSH 901 950 ENSTTRP00000013279/1-1260 RCFNALTNSF QPSLLGRKIL AAIIMKKDSE DLGVVVSLGT GNRCVKGDSL ENSP00000357459/1-1226 RCFNTLTNSF QPSLLGRKIL AAIIMKKDSE DMGVVVSLGT GNRCVKGDSL ENSBTAP00000009896/1-1176 RCFNALTNSF QPSLLGRKIL AAIIMKKDSD DLGVVVSLGT GNRCVKGDSL bmy_09709T0/1-1172 RCFNALTNSF QPSLLGRKIL AAIIMKKDSE DLGVVVSLGT GNRCVKGDSL BACU007471/1-1092 RCFNALTNSF QPSLLGRKIL AAIIMKKDSE DLGVVVSLGT GNRCVKGDSL 951 1000 ENSTTRP00000013279/1-1260 SLKGETVNDC HAEIISRRGF IRFLYSELMK YNPQTAKDSI FEPAKGGEKL ENSP00000357459/1-1226 SLKGETVNDC HAEIISRRGF IRFLYSELMK YNSQTAKDSI FEPAKGGEKL ENSBTAP00000009896/1-1176 SLKGETVNDC HAEIISRRGF IRFLYSELMK YNPQTAKDSI FEPAKGGEKL bmy_09709T0/1-1172 SLKGETVNDC HAEIISRRGF IRFLYSELMK YNPQTAKDSI FEPAKGGEKL BACU007471/1-1092 SLKGETVNDC HAEIISRRGF IRFLYSELMK YNPQTAKDSI FEPAKGGEKL 1001 1050 ENSTTRP00000013279/1-1260 QIKKTVSFHL YISTAPCGDG ALFDKSCSDR AVESTDSRHY PVFENPKQGK ENSP00000357459/1-1226 QIKKTVSFHL YISTAPCGDG ALFDKSCSDR AMESTESRHY PVFENPKQGK ENSBTAP00000009896/1-1176 QIKKSVSFHL YISTAPCGDG ALFDKSCSDR AVESTDSRHY PVFENPKQGK bmy_09709T0/1-1172 QIKKTVSFHL YISTAPCGDG ALFDKSCSDR AVESTDSRHY PVFENPKQGK BACU007471/1-1092 QIKKTVSFHL YISTAPCGDG ALFDKSCSDR AVESTDPRHY PVFENPKQGK 1051 1100 ENSTTRP00000013279/1-1260 LRTKVENGEG TIPVESSDIV PTWDGIRLGE RLRTMSCSDK ILRWNVLGLQ ENSP00000357459/1-1226 LRTKVENGEG TIPVESSDIV PTWDGIRLGE RLRTMSCSDK ILRWNVLGLQ ENSBTAP00000009896/1-1176 LRTKVENGEG TIPVESSDIV PTWDGIRLGE RLRTMSCSDK ILRWNVLGLQ bmy_09709T0/1-1172 LRTKVENGEG TIPVESSDIV PTWDGIRLGE RLRTMSCSDK ILRWNVLGLQ BACU007471/1-1092 LRTKVENGEG TIPVESSDIV PTWDGIRLGE RLRTMSCSDK ILRWNVLGLQ 1101 1150 ENSTTRP00000013279/1-1260 GALLTHFLQP VYLKSVTLGY LFSQGHLTRA ICCRVTRDGS AFEDGLRHPF ENSP00000357459/1-1226 GALLTHFLQP IYLKSVTLGY LFSQGHLTRA ICCRVTRDGS AFEDGLRHPF ENSBTAP00000009896/1-1176 GALLTHFLQP VYLKSVTLGY LFSQGHLTRA ICCRVTRDGS AFEDGLRHPF bmy_09709T0/1-1172 GALLTHFLQP VYLKSVTLGY LFSQGHLTRA ICCRVTRDGS AFEDGLRHPF BACU007471/1-1092 GALLTHFLQP VYLKSVTLGY LFSQGHLTRA ICCRVTRDGS AFEDGLRHPF 1151 1200 ENSTTRP00000013279/1-1260 IVNHPKVGRV SVYDSKRQSG KTKETSVNWC LADGYDLEIL DGTRGTVDGP ENSP00000357459/1-1226 IVNHPKVGRV SIYDSKRQSG KTKETSVNWC LADGYDLEIL DGTRGTVDGP ENSBTAP00000009896/1-1176 IVNHPKVGRV SVYDSKRQSG KTKETSVNWC LADGYDLEIL DGTRGTVDGP bmy_09709T0/1-1172 IVNHPKVGRV SVYDSKRQSG KTKETSVNWC LADGYDLEIL DGTRGTVDGP BACU007471/1-1092 IVNHPKVGRV SVYDSKRQSG KTKETSVNWC LADGYDLEIL DGTRGTVDGP 1201 1250 ENSTTRP00000013279/1-1260 RNELSRVSKK NIFLLFKKLC SFRYRRDLLR LSYGEAKKAA RDYEIAKNYF ENSP00000357459/1-1226 RNELSRVSKK NIFLLFKKLC SFRYRRDLLR LSYGEAKKAA RDYETAKNYF ENSBTAP00000009896/1-1176 RNELSRVSKK NIFLLFKKLC SFRYRRDLLR LSYGEAKKAA RDYEIAKNYF bmy_09709T0/1-1172 RNELSRVSKK NIFLLFKKLC SFRYRRDLLR LSYGEAKRAA RDYEIAKNYF BACU007471/1-1092 RNELSRVSKK NIFLLFKKLC SFRYRRDLLR LSYGEAKRAA RDYEIAKNYF 1251 1300 ENSTTRP00000013279/1-1260 KKSLKDMGYG NWISKPQEEK NFYLCPV ENSP00000357459/1-1226 KKGLKDMGYG NWISKPQEEK NFYLCPV ENSBTAP00000009896/1-1176 KKSLKDMGYG NWISKPQEEK NFYLCPV bmy_09709T0/1-1172 KKSLKDMGYG NWISKPQEEK NFYLCPV BACU007471/1-1092 KKSLKDMGYG NWISKPQEEK NFYLCPV