KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:43 2014 Check: 00 .. Name: ENSP00000380334/1-348 Len: 399 Check: 7124 Weight: 1.00 Name: ENSTTRP00000008053/1-270 Len: 399 Check: 9753 Weight: 1.00 Name: ENSBTAP00000009911/1-339 Len: 399 Check: 1940 Weight: 1.00 Name: bmy_01165T0/1-356 Len: 399 Check: 6080 Weight: 1.00 Name: BACU000862/1-339 Len: 399 Check: 1252 Weight: 1.00 // 1 50 ENSP00000380334/1-348 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008053/1-270 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009911/1-339 ---------- ---------- ---------- ---------- ---------- bmy_01165T0/1-356 QAGASLKAAP EDSWDHSRDS GWLEGSEGQT QPGPGWERTS ATPAPGPLTA BACU000862/1-339 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000380334/1-348 MAVAQQLRAE SDFEQLPDDV AISANIADIE EKRGFTSHFV FVIEVKTKGG ENSTTRP00000008053/1-270 MATAQQLRAE SDFNQLPDDI ATSANIADIE EKKGFTSHFV FVIEVKTKGG ENSBTAP00000009911/1-339 MAKAQQLRAE SDFDQLPDDI AISANIADIE EKRGFTSHFV FVIEVKTKGG bmy_01165T0/1-356 MAVAQQLRAE SDFDQLPDDI ATSANIADIE EKKGFTSHFV FVIEVKTKGG BACU000862/1-339 MAVAQQLRAE SDFDQLPDDI ATSANIADIE EKKGFRSHFV FVIEVKTKGG 101 150 ENSP00000380334/1-348 SKYLIYRRYR QFHALQSKLE ERFGPDSKSS ALACTLPTLP AKVYVGVKQE ENSTTRP00000008053/1-270 SKYLIYRRYR QFYALQSKLE ERFGPENKAS PYTCILPTLP AKVYVGVKQE ENSBTAP00000009911/1-339 SKYLIYRRYR QFYALQSKLE ERFGQESKTS PLTCILPTLP AKVYVGVKQE bmy_01165T0/1-356 SKYLIYRRYR QFYALQSKLE ERFGPESKAS PYTCVLPTLP AKVYMGVKQE BACU000862/1-339 SKYLIYRRYR QFYALQSKLE ERFGPESKAS PYTCVLPTLP AKVYMGVKQE 151 200 ENSP00000380334/1-348 IAEMRIPALN AYMKSLLSLP VWVLMDEDVR IFFYQSPYDS EQVPQALRRL ENSTTRP00000008053/1-270 IAEMRIPALN AYMKHLLSLP IWVLMDEDVR IFFYQSSYDA EQVPQALRRL ENSBTAP00000009911/1-339 IAEMRIPALN AYMKHLLSLP IWVLMDEDVR IFFYQSSYDA EQVPQALRRL bmy_01165T0/1-356 IAEMRIPALN AYMKHLLSLP IWVLMDEDVR IFFYQSSYDA EQVPQALRRL BACU000862/1-339 IAEMRIPALN AYMKHLLSLP IWVLMDEDVR IFFYQSSYDA EQVPQALRRL 201 250 ENSP00000380334/1-348 RPRTRKVKSV SPQGNSVDRM AAPRAEALFD FTGNSKLELN FKAGDVIFLL ENSTTRP00000008053/1-270 RPRTRKVKST SPQGAGFDRM AAPRAEALFD FTGNSKLELN FKVGDVIFLL ENSBTAP00000009911/1-339 RPRTRRVKSE SPQAAGIDRM AAPRAEALFD FTGNSKHELN FKVGDVIFLL bmy_01165T0/1-356 RPRTRKVKSA SPQGAGFDRM AAPRA----- ---------- ---------- BACU000862/1-339 RPRTRKVKSA SPQGAGFDRM AAPRAEALFD FTGNSKLELN FKVGDVIFLL 251 300 ENSP00000380334/1-348 SRINKDWLEG TVRGATGIFP LSFVKILKDF PEEDDPTNWL RCYYYEDTIS ENSTTRP00000008053/1-270 SRINKDWLEH LKARRGSQIS QKAVTGCQGP ARPGQPHPPL P--------- ENSBTAP00000009911/1-339 SRINKDWLEG TVQGTTGIFP VSFVKILKDF PEEEDPTNWL RCYYYEDTIS bmy_01165T0/1-356 --------EG TFRGTTGIFP VSFVKILKDF PEEDDPTNWL RCYYYEDTIS BACU000862/1-339 SRINKDWLEG TVRGTTGIFP VSFVKILKDF PEEDDPTNWL RCYYYEDTIS 301 350 ENSP00000380334/1-348 TIKSVAWEGG ACPAFLPSLR PLPLTSPSHG SLSHSKAPSG SQMSHNAVTS ENSTTRP00000008053/1-270 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009911/1-339 TIKDIAVE-- ------EDLS STPLFKDLLE LMRREFQRED IALNYRDAEG bmy_01165T0/1-356 TIKDIAVE-- ------EDLK STPLFKDLLE LMRREFRRED IALNYQDAEG BACU000862/1-339 TIKDIAVE-- ------EDLK STPLFKDLLE LMRREFRRED IALNYQDAEG 351 400 ENSP00000380334/1-348 HQRPGWPGQP HSPFPHPTPH FQPDASLLQP VTPLGTSRWR KISAALPY- ENSTTRP00000008053/1-270 ---------- ---------- FQPAASSPLP LVPLGTSQWR KTSKAPHSS ENSBTAP00000009911/1-339 DLVRLLSDED VKLMVKRARG LPSQKRLFPW KLHVTQEDNY KVYNTVP-- bmy_01165T0/1-356 DLVRLLSDED VRLMVKWAQG LPSQKHLFPW KLHITQEDNY KVYNTVP-- BACU000862/1-339 DLVRLLSDED VRLMVKWAQG LPSQKHLFPW KLHITQQDNY KVYNTVP--