KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:46 2014 Check: 00 .. Name: ENSP00000342513/1-138 Len: 142 Check: 356 Weight: 1.00 Name: ENSBTAP00000009939/1-134 Len: 142 Check: 3523 Weight: 1.00 Name: ENSTTRP00000008032/1-125 Len: 142 Check: 5053 Weight: 1.00 Name: bmy_01990T0/1-131 Len: 142 Check: 8683 Weight: 1.00 Name: BACU003250/1-131 Len: 142 Check: 9189 Weight: 1.00 // 1 50 ENSP00000342513/1-138 MRQKAVSLFL CYLLLFTCSG VEAGENAGKD AGKKKCSESS DSGSGFWKAL ENSBTAP00000009939/1-134 MRQKAVSLFL CYLLLYTCGC CEEEDEKRYS EE-------- NSDSSFWGMV ENSTTRP00000008032/1-125 MRQKAVSLVL CYLLLNTCGC ---EETKK-- ---------- --ESGFWGTL bmy_01990T0/1-131 MRQKAVSLVL CYLLLYTCGC ---EETDERR SG-------- DGDSGFWGTL BACU003250/1-131 MRQKAVSLVL CYLLLYTCGC ---EETDKRR SG-------- DGDSGFWGTL 51 100 ENSP00000342513/1-138 TFMAVGGGLA VAGLPALGFT GAGIAANSVA ASLMSWSAIL NGGGVPAGGL ENSBTAP00000009939/1-134 TYMAVGGGLM AAALPMLGFA STGIAANSLA SSLMSWSAVA NGGGVPAGGL ENSTTRP00000008032/1-125 TYMAVGGGLM AVALPALGFT STGIAANSVA ASLMSWSAVA NGGGVPAGGL bmy_01990T0/1-131 TYMAVGGGLM AMALPALGFA STGIAANSVA ASLMSWSAVA NGGGVPAGGL BACU003250/1-131 TYMAVGGGLM AMALPALGFS STGIAANSVA ASLMSWSAVA NGGGVPAGGL 101 150 ENSP00000342513/1-138 VATLQSLGAG GSSVVIGNIG ALMGYATHKY LDSEE----D EE ENSBTAP00000009939/1-134 VATLQSLGAS GGSALMAKIG AFLGYTVHKQ VESRQKESKE KK ENSTTRP00000008032/1-125 VATLQSLGAN GGSALMAKIG ALLGYTVHKQ TESRGKERAD EE bmy_01990T0/1-131 VATLQSLGAS GGSALMAKIG ALLGYTIHKQ IESRGKERAD EE BACU003250/1-131 VATLQSLGAS GGSALMAKIG ALLGYTVHKQ IESRGKERVD EE