KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:39:46 2014 Check: 00 .. Name: ENSP00000441755/1-520 Len: 652 Check: 9614 Weight: 1.00 Name: ENSBTAP00000009942/1-637 Len: 652 Check: 9761 Weight: 1.00 Name: bmy_12540T0/1-523 Len: 652 Check: 780 Weight: 1.00 Name: BACU003099/1-640 Len: 652 Check: 4819 Weight: 1.00 // 1 50 ENSP00000441755/1-520 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009942/1-637 --MPVYLFIS FCRTEMDAKK PRKGSLTSFP MLKATKKQNL ASVKVESKPL bmy_12540T0/1-523 ------MNRK GCRCLHLGKS PCNGILTDI- ---------- ---------- BACU003099/1-640 MQFLPPPTPK GTKTEMDAKN PRKCSLTSFP ILKARKKQNL TSVKVESKPL 51 100 ENSP00000441755/1-520 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009942/1-637 LQIQKPPSKV TNFRMTQFLN KNTNTSFTSL PFVDTKGKKT MVNFPHISSK bmy_12540T0/1-523 ---------- ---------- ---------- ---------- ---------- BACU003099/1-640 LQIQKPPSKV KSFRMTQFLN KNRNTTFMPL PFVDTKGKKN MVNFPRISSK 101 150 ENSP00000441755/1-520 ---------- -------MPA SELKASEIPF HPSIKTQDPK AEEKSPKKQK ENSBTAP00000009942/1-637 LPLKQPLLYQ ESPAHC-QKS SELKPSETVF PSNVKTQDAK AEEKPPKKHK bmy_12540T0/1-523 ---------- ---------- ---------- ---------- ---------- BACU003099/1-640 LPLKQPLLHH ENQTHSQGSS SEPKSSETRF PSNIKTQDPK PEEKPPKKRK 151 200 ENSP00000441755/1-520 --VTLTAAEA LKLFKNQLSP YEQSEILGYA ELWFLGLEAK KLDTAPEKFS ENSBTAP00000009942/1-637 HKVPLTAAEA LKFFKKQLSS YEQSEILGYT ELWFLGLEAE KLHMAPEKFS bmy_12540T0/1-523 --CSVVHTEA LKFFKNQLSS YEQSEVLGYT ELWFLGLEAE KLHMAPDKFS BACU003099/1-640 RKVPLRAAEA LKIFKNQLSS YEQSEVLGYT ELWVLGLEAE KLHVAPDKFS 201 250 ENSP00000441755/1-520 KTSFDDEHGF YLKVLHDHIA YRYEVLETIG KGSFGQVAKC LDHKNNELVA ENSBTAP00000009942/1-637 KTSFDDEHGS YMKVLHDHIA YRYEVLEIIG KGSFGQVAKC LDHKNNELVA bmy_12540T0/1-523 KTSFDDKHGS YMKVLHDHIA YRYEVLEMIG KGSFGQVAKC LDHKNNELVA BACU003099/1-640 KTSFDDKHGS YMKVLHDHIA YRYEVLEMIG KGSFGQVAKC LDHKNNELVA 251 300 ENSP00000441755/1-520 LKIIRNKKRF HQQALMELKI LEALRKKDKD NTYNVVHMKD FFYFRNHFCI ENSBTAP00000009942/1-637 LKIIRNKKRF HHQALVELKI LEALRRKDKD NTYNVVHMKD FFYFRNHLCI bmy_12540T0/1-523 LKIIRNKKRF HHQALVELKI LEALRRKDKD NTYNVVHMKD FFYFRNHLCI BACU003099/1-640 LKIIRNKKRF HHQALVELKI LEAVRRKDKD NTYNVVHMKD FFYFRNHLCI 301 350 ENSP00000441755/1-520 TFELLGINLY ELMKNNNFQG FSLSIVRRFT LSVLKCLQML SVEKIIHCDL ENSBTAP00000009942/1-637 TFELLGINLY ELMKNNSFQG FSLSIVRRFT LSVLKCLQML YMEKIIHCDL bmy_12540T0/1-523 TFELLGINLY ELMKNNSFQG FSLSIVRRFT LSVLKCLQML YIEKIIHCDL BACU003099/1-640 TFELLGINLY ELMKNNSFQG FSLSIVRRFT LSVLKCLQML YIEKIIHCDL 351 400 ENSP00000441755/1-520 KPENIVLYQK GQASVKVIDF GSSCYEHQKV YTYIQSRFYR SPEVILGHPY ENSBTAP00000009942/1-637 KPENIVLYQK GQVSVKVIDF GSSCYEHQKV YTYIQSRFYR SPEVILGHPY bmy_12540T0/1-523 KPENIVLYQK GQVSVKVIDF GSSCYEHQKV YTYIQSRFYR SPEVILGHPY BACU003099/1-640 KPENIVLYQK GQVSVKVIDF GSSCYEHQKV YTYIQSRFYR SPEVILGHTY 401 450 ENSP00000441755/1-520 DVAIDMWSLG CITAELYTGY PLFPGENEVE QLACIMEVLG LPPAGFIQTA ENSBTAP00000009942/1-637 NMAIDMWSLG CIMAELYTGY PLFPGENEVE QLACIMEVLG LPPSRFIQTA bmy_12540T0/1-523 NMAIDMWSLG CIMAELYTGY PLFPGENEAE QLACIMEVLG LPPTHFIQTA BACU003099/1-640 NMAIDMWSLG CIMAELYTGY PLFPGENEAE QLACIMEVLG LPPTHFIQTA 451 500 ENSP00000441755/1-520 SRRQTFFDSK GFPKNITNNR GKKRYPDSKD LTMVLKTYDT SFLDFLR--- ENSBTAP00000009942/1-637 SRRQMFFDSK GFPKNITNNR GKKRYPDSKD LTVLLKTCDT SFLDFLR--- bmy_12540T0/1-523 SRRQTFFDSK GFPKNITNNR GKKRYPDSKD LTMVLKTYDT SFLDFLRKWK BACU003099/1-640 SRRQTFFDSK GFPKNITNNR GKKRYPDSKD LTMVLKTYDT SFLDFLR--- 501 550 ENSP00000441755/1-520 ----RCLV-- ---WEPSLRM TPDQALKHAW IHQSRNLKPQ PRPQTLRKSN ENSBTAP00000009942/1-637 ----RCLV-- ---WEPSLRM TPDQALKHAW IHEPRNLKAR PRLQTLRKTS bmy_12540T0/1-523 QNPNRCWALL VCSWEPSLRM TPDQALKHAW IHEPRNLKAQ PRLQTLRQTS BACU003099/1-640 ----KCLV-- ---WEPSLRM TPDQALKHAW IHEPRNLKAQ PRLQTLRKTS 551 600 ENSP00000441755/1-520 SFFPSETRKD KVQGCHHSSR KADEITKETT EKTKDSPTKH VQHSGDQQDC ENSBTAP00000009942/1-637 LCFPSESRKD KVQAQHHSGK KDVVLQVEAK DKIKDGATKQ DENRGNQRGS bmy_12540T0/1-523 LCFPSEARKN KVQGQHHLGK KEVILQIETK DKIKGGATKQ DQNSANQQGS BACU003099/1-640 LCFPSEARKD KVQGQHHLGK EEVILQIETK DKIKGGTTKQ DQNSANQQGS 601 650 ENSP00000441755/1-520 LQHGADTVQL PQLVDAPKKS EAAVGAEVSM TSPG-QSKNF SLKNTNVLPP ENSBTAP00000009942/1-637 GQHTAEVIQL PHLAEASGKP EVAVGPAESK TSSGQQNKKS SPKNTNALPP bmy_12540T0/1-523 VQHTAELVQL PHLAEASGKP EAVVGPAESK ISTGQQNKNC SPKNTNILPP BACU003099/1-640 VQHTAEVVQL PHLAEASGKP EAVVGPAESK TSTGQQNKNC SPKNTNILPP 651 700 ENSP00000441755/1-520 IV ENSBTAP00000009942/1-637 IV bmy_12540T0/1-523 IV BACU003099/1-640 IV