KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:39:47 2014 Check: 00 .. Name: ENSP00000438273/1-710 Len: 717 Check: 279 Weight: 1.00 Name: ENSBTAP00000009953/1-708 Len: 717 Check: 49 Weight: 1.00 Name: bmy_02493T0/1-717 Len: 717 Check: 9130 Weight: 1.00 Name: BACU004201/1-666 Len: 717 Check: 3666 Weight: 1.00 // 1 50 ENSP00000438273/1-710 ---MVMACRV VNKRRHMGLQ QLSSFAETGR TFLGPLKSSK FIIDEECHES ENSBTAP00000009953/1-708 -----MDCRV INRRRHTGLQ QLSSFAETGR TFLGPVKSSK FIIDEECHES bmy_02493T0/1-717 MMIHVMACRV INKRRHMGLQ QLSSFAETGR TFLGPVKSSK FIIDEECHET BACU004201/1-666 ---------- ------MGLQ QLSSFAETGR TFLGPVKSSK FIIDEECHET 51 100 ENSP00000438273/1-710 VLISSTVRLL ESLDLTSAVG QLLNEAVQAQ NNTYRTGIST LLFLVGAWSS ENSBTAP00000009953/1-708 VLISSTVRLL ESLDLTSAVG QLLNEAIQAQ NSTYRTGTST LLFLVGAWSS bmy_02493T0/1-717 VLISSTVRLL ESLDLTSAVG QLLNEAVQAQ NNTYRTGTST LLFLVGAWSS BACU004201/1-666 VLISSTVRLL ESLDLTSAVG QLLNEAVQAQ NNTYRTGTST LLFLVGAWSS 101 150 ENSP00000438273/1-710 AVEECLHLGV PISIIVSVMS EGLNFCSEEV VSLHVPVHNI FDCMDSTKTF ENSBTAP00000009953/1-708 AAEECLHLGV PMSLIASVMS EGLNSCIEEV ESLQVPIHSV CDHIDSTETF bmy_02493T0/1-717 AAEECLHLGV PISLIVSVMS EGLNSCIEEV VSLQVPIRNV FDHMVNTKTF BACU004201/1-666 AAEECLHLGV PISLIVSVMS EGLNSCIEEV VSLQVPIHNV FDHMVNTKTF 151 200 ENSP00000438273/1-710 SQLETFSVSL CPFLQVPSDT DLIEELHGLK DVASQTLTIS NLSGRPLKSY ENSBTAP00000009953/1-708 SGL---SVSL YPSLQIPSGT GLVQKEHDLK DVTSQSLAFC SLSGRPVKSP bmy_02493T0/1-717 SGPETFSVSV YPFLQIPSGT GLIQKERDLK DVASQSLAIY SLSGRPVKSP BACU004201/1-666 SGPETFSVSV YPFLQMPSGT GLIQKERDLK DVASQSLAIY SLSGRPVKSP 201 250 ENSP00000438273/1-710 ELFKPQTKVE ADNNTSR--- TLKNSLLADT CCRQSILIHS RHFNRTDNTE ENSBTAP00000009953/1-708 QLFRLQAKFE ADENISRTPQ TLKNNLLADT HCRKSVLTHS RHFSRTDR-H bmy_02493T0/1-717 QLFRSQAKVE ADGNTSQTPQ TLKNSPLADT RCRKSVLTHS RHFSRTGNNQ BACU004201/1-666 QLFRSQAKVE ADENTSQTPQ TLKNSPLADT RCRKSVLTHS RHFSRTGNNQ 251 300 ENSP00000438273/1-710 GVSKPDGFQE HVT-ATHKTY RCNDLVELAV GLSHGDHSSM KLVEEAVQLQ ENSBTAP00000009953/1-708 WISKPRGFLE QLSAAAPKTY SCSNLAELEV GLSHGDPSSM RLVDEAVRLQ bmy_02493T0/1-717 WISKPDGVPE QLSAATPKTY RCDDLVELEV GLSHGGHSSM KLVDEAVRLQ BACU004201/1-666 WISKPDVFLE QLSAATPKTY RCDDLVELEV GLSHGGHSSM KLVDEAVRLQ 301 350 ENSP00000438273/1-710 YQNACVQQGN CTKPFMFDIS RIFTCCLPGL PETSSCVCPG YITVVSVSNN ENSBTAP00000009953/1-708 HQNAGRQRGS HTGLFPFDIS RIFTCCLPGL PDTLSCVCPG YITVVSMSTA bmy_02493T0/1-717 YQNAGMQQGS CTMPFLFDIS RIFTCCLPGL PETFSCVCPG YITVVSIPST BACU004201/1-666 YQNA------ ---------- ---------- ---------G YITVVSISST 351 400 ENSP00000438273/1-710 PVIKELQNQP VRIVLIEGDL TENYRHLGFN KSANIKTVLD SMRLQEDSSE ENSBTAP00000009953/1-708 TLVKELQNQP VRVVLVEGDL TENYRHLGFN KPANIKTVSE SVKVQQDSSE bmy_02493T0/1-717 TLIKELQNQP IRVVLVEGDL TENYRHLGFN KSASIKTVSE SVKLQQDGSE BACU004201/1-666 TLIKELKNQP IRVVLVEGDL TENYRHLGFN KSASIKTVSE SLKLQQDGSE 401 450 ENSP00000438273/1-710 ELWANHVLQV LIQFKVNLVL VQGNVSERLI EKCINSKRLV IGSVNGSVMQ ENSBTAP00000009953/1-708 ELWTDHVLQV LIKFNVNLVL ARGNVSERLA EKCTDSKQLV IGSVQDSVLQ bmy_02493T0/1-717 ELWTDHVLQV LIKFNVNLVL AQGNVSERLI EKCTDNKRLV IGSVNGNVMQ BACU004201/1-666 ELWTDHVLQV LIKFNVNLVL AQGNVSERLI EKCTDNKRLV IGSVNGNVMQ 451 500 ENSP00000438273/1-710 AFAEAAGAVQ VAYITQVNED CVGDGVCVTF WRSSPLDVVD RNNRIAILLK ENSBTAP00000009953/1-708 AFAEASGAVQ VAYLTHMNEN CVGSGVSVTT WRSIPSDTID GISRMAVVLK bmy_02493T0/1-717 AFAEASGAVQ VAYITQINEN CVGNGVCVTI WRSIPFDAVD QINRMAIVLN BACU004201/1-666 AFAEASGAVQ VAYITQVNEN CVGNGVCVTI WRSIPFDAVD RINRMAIVLK 501 550 ENSP00000438273/1-710 TEGINLVTAV LTNPVTAQMQ IKEDRFWTCA YRLYYALKEE KVFLGGGAVE ENSBTAP00000009953/1-708 TEGINLVTVV LTSPVIAQMQ TKEDRFWTCA SRLYYALKEQ KVFLGGGAVE bmy_02493T0/1-717 TEGINLVTVV LTSPVTAQMQ TKEDTFWTCA YRLYHALKEQ KVFLGGGAVE BACU004201/1-666 TEGINLVTVV LTSPVTAQMQ TKEDTFWTCA YRLYHALKEQ KVFLGGGAVE 551 600 ENSP00000438273/1-710 FLCLSCLHIL AEQSLKKENH ACSGWLHNTS SWLASSLAIY RPTVLKFLAN ENSBTAP00000009953/1-708 ILCLTHLQSL AGQSVNKGNQ DCSGWLHNTS SWLASSAALY RPTVLKCLAD bmy_02493T0/1-717 LLCLSHLQIL AEQSVNKGNQ GCSGWLHNTS SWLASSVTQY RPTVLKCLAN BACU004201/1-666 FLCLSHLQIL AEQSVNKGNQ GCSGWLHNTS SWLASSVTQY RPTVLKCLAN 601 650 ENSP00000438273/1-710 GWQKYLSTLL YNTANYSSEF EASTYIQHHL QNATDSGSPS SYILNEYSKL ENSBTAP00000009953/1-708 GWHRYLSTLL RNTAVYSSDS EAATSIQCHL QNAADSGSPS SYILNEYSKL bmy_02493T0/1-717 GWHRYLSTLL YNTASYSSEF EAGTFIQHHL QNAADSGSPS SYVLNEYSKL BACU004201/1-666 GWRRYLSTLL YNTASYSSEF EAGTFIQHHL QNAADSGSPS SYVLNEYSKL 651 700 ENSP00000438273/1-710 NSRIFNSDIS NKLEQIPRVY DVVTPKIEAW RRALDLVLLV LQTDSEIITG ENSBTAP00000009953/1-708 NSVILNLGIS DKLEPIPRVY DVVTPKIEAW RRALDLVLLV LQTDNEIITG bmy_02493T0/1-717 NSGILNSDIS DKLEQIPRVY DIVTPKIEAW RRALDLVLLV LQTDSEIITG BACU004201/1-666 NSGILNSDIS DKPEQIPRVY DVVTPKIEAW RRALDLVLLV LQTDSEIITG 701 750 ENSP00000438273/1-710 HGHTQINSQE LTGFLFL ENSBTAP00000009953/1-708 LAHTQKSSQE SEGFLFL bmy_02493T0/1-717 LGHTQINSQE SEGILFL BACU004201/1-666 LGHTQINSQE SEGILFL