KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:39:48 2014 Check: 00 .. Name: ENSTTRP00000006543/1-1594 Len: 1684 Check: 5026 Weight: 1.00 Name: ENSBTAP00000009955/1-1585 Len: 1684 Check: 9977 Weight: 1.00 Name: bmy_14577T0/1-1440 Len: 1684 Check: 5061 Weight: 1.00 Name: BACU009617/1-1622 Len: 1684 Check: 7586 Weight: 1.00 // 1 50 ENSTTRP00000006543/1-1594 ---------- ---------- ---------- --MLQSRSVD KQHAVINYDA ENSBTAP00000009955/1-1585 MSLTSWFLVS SGGTRHRLPR EMIFVGRDDC ELMLQSRSVD KQHAVINYDA bmy_14577T0/1-1440 ---------- ---------- -MIFVGRDDC ELMLQSRSVD KQHAVINYDA BACU009617/1-1622 MSLTSWFLVS SGGTRHRLPR EMIFVGRDDC ELMLQSRSVD KQHAVINYDA 51 100 ENSTTRP00000006543/1-1594 STDEHLVKDL GSLNGTFVND VRIPEQTYIT LKLEDKLRFG YDTNLFTVVR ENSBTAP00000009955/1-1585 STDEHLVKDL GSLNGTFVND VRIPEQTYIT LKLEDKLRFG YDTNLFTVVR bmy_14577T0/1-1440 STDEHLVKDL GSLNGTFVND VRIPEQTYIT LKLEDKLRFG YDI-LIDFVH BACU009617/1-1622 STDEHLVKDL GSLNGTFVND VRIPEQTYIT LKLEDKLRFG YDTNLFTVVR 101 150 ENSTTRP00000006543/1-1594 GEMRVPEEAL KHEKFTIQLQ LSQKSSESEL LKSACAKSID SKVADTAAEV ENSBTAP00000009955/1-1585 GEMRVPEEAL KHEKFTIQLQ LSQKSSESEL SKSACAKSID SKVADSATEV bmy_14577T0/1-1440 LLNLFKNLYS GHEKFTIQLQ LSQKSSESEL LKSACAKSID SKVADTAAEV BACU009617/1-1622 GEMRVPEEAL KHEKFTIQLQ LSQKSSESEL LKSACAKSID SKVADTMAEV 151 200 ENSTTRP00000006543/1-1594 PHKATEALKS EEKAIDTSAM PRGTPLYGQP SWWGDDEVDE QRAFKSNGKP ENSBTAP00000009955/1-1585 QHKPTEALKS EEKVVGTGLL PGKSPWTEEP ESWGRTELDT TEKFMLNSYP bmy_14577T0/1-1440 PHKATEALKS EEKAIDTSAM PRGTPLYGQP SWWGDDEVDE QRAFKSNGKP BACU009617/1-1622 PHKATEALKS EEKAIDTSAM PRGTPLYGQP SWWGDDEVDE QRAFKSNGKP 201 250 ENSTTRP00000006543/1-1594 EEKNHETGTS GCSIDAKQVE EQSAAANEEV LFPFCREPSY FEIPTKEFQQ ENSBTAP00000009955/1-1585 PDLSHESGTL GCSIDAKQVE EQSAAASEEV LFPFCREPSY FEIPTKEFQQ bmy_14577T0/1-1440 EEKNHETGTS GCSIDAKQVE EQSAAANEEV LFPFCREPSY FEIPTKEFQQ BACU009617/1-1622 EEKNRETGTS GCSIDAKQVE EQSAAANEEV LFPFCREPSY FEIPTKEFQQ 251 300 ENSTTRP00000006543/1-1594 PSQITESTIH EIPTKDTPSS HTAGAGHASF TIEFDDSTPG KVTIRDHVTK ENSBTAP00000009955/1-1585 PSQITESTIH EIPTKDTPSS HTTGAGHASF TIEFDDSTPG KVTIRDHVTK bmy_14577T0/1-1440 PSQITESTIH EIPTKDTPSS HTTGAGHASF TIEFDDSTPG KVTIRDHVTK BACU009617/1-1622 PSQITESTIH EIPTKDTPSS HTTGAGHASF TIEFDDSTPG KVTIRDHVTK 301 350 ENSTTRP00000006543/1-1594 FTSDQRHKSK KSSPGTQDLP GIQTGMMAPE NKVADWLAQN NPPQMVWERS ENSBTAP00000009955/1-1585 FTSDQRHKSK KSSPGTQDLP GIQTGMMAPE NKVADWLAQN NPPQMVWERT bmy_14577T0/1-1440 FTSDQRHKSK KSSPGTQDLP GIQTGMMAPE NKVADWLAQN NPPQMVWERS BACU009617/1-1622 FTSDQRHKSK KSSPGAQDLP GIQTGMMAPE NKVADWLAQN NPPQVAWERS 351 400 ENSTTRP00000006543/1-1594 EEDSKSIKSD VPVYLKRLKG NKHDDGTQSD SENAGAHRRC SKRATLEEHL ENSBTAP00000009955/1-1585 EEDSKSIKSD VPVYLKRLKG NKHDDGTQSD SENAGAHRRC SKRATLEEHL bmy_14577T0/1-1440 EEDSKSIKSD VPVYLKRLKG NKHDDGTQSD SENAGAHRRC SKRATLEEHL BACU009617/1-1622 EEDSKSIKSD VPVYLKRLKG NKHDDGTQSD SENAGAHRRC SKRATLEEHL 401 450 ENSTTRP00000006543/1-1594 RRHHSEQKKL QKAQATEKHQ DQAVVSHTAF MIAFFDEDNP RKRRSYSFTH ENSBTAP00000009955/1-1585 RRHHSEQKKL QKAQATEKHQ DQAV------ ---------- ---------- bmy_14577T0/1-1440 RRHHSEQKKL QKAQATEKHQ DQAV------ ---------- ---------- BACU009617/1-1622 RRHHSEQKKL QKAQATEKHQ DQAV------ ---------- ---------- 451 500 ENSTTRP00000006543/1-1594 STGILCQETT YSAPHTKLEK TKSPTADAKV VSLSLQTSSA HHRGGHGVPH ENSBTAP00000009955/1-1585 ---------- ---------- ---------- ------TSSA HHRGGHGVPH bmy_14577T0/1-1440 ---------- ---------- ---------- ---------- ---------- BACU009617/1-1622 ---------- ---------- ---------- ------TSSA HHRGGHGVPH 501 550 ENSTTRP00000006543/1-1594 GKLLKQKSEE PSVSIPFLQT ALLRSSGSLG HRPSQEMDKM LKNQATSAAS ENSBTAP00000009955/1-1585 GKLLKQKSEE PSVSIPFLQT ALLRSSGSLG HRPSQEMDKM LKNQATSAAS bmy_14577T0/1-1440 ---------- ---------- ---------- ---------- ---------- BACU009617/1-1622 GKLLKQKSEE PSVSIPFLQT ALLRSSGSLG HRPSQEMDKM LKNQATSAAS 551 600 ENSTTRP00000006543/1-1594 EKDNDDDQSD KGTYTIELEN PNSEEVEARK MKDKVFGVDD NQDYNRPVIK ENSBTAP00000009955/1-1585 EKDNDDDQSD KGTYTIELEN PNSEEVEARK MIDKVFGVDD NQDYNRPIIN bmy_14577T0/1-1440 --DNDDDQSD KGTYTIELEN PNSEEVEARK MIDKVFGVDD NQDYNRPVIK BACU009617/1-1622 EKDNDDDQSD KGTYTIELEN PNSEEVEARK MIDKVFGVDD NQDYNRPVIK 601 650 ENSTTRP00000006543/1-1594 EKHKDLVKDW ALNSAAVVME ERKPLSTPGF HSSE------ ---------- ENSBTAP00000009955/1-1585 EKHKDLVKDW ALSSAAVVME ERKPLSTPGF HNSE------ ---------- bmy_14577T0/1-1440 EKHKDLVKDW ALNSAAVVME ERKPLSTPGF HSSE------ ---------- BACU009617/1-1622 EKHKDLVKDW ALNSAAVVME ERKPLSTPGF HSSESQNCEQ LPRNLGGNSK 651 700 ENSTTRP00000006543/1-1594 ---------- -EGTSSSGNK RWVSQWASLA ANHTRHDQEE RIMELSVPVS ENSBTAP00000009955/1-1585 ---------- -EGTSSSGNK RWVSQWASLA ANHTRHDQEE RIMELSVPVP bmy_14577T0/1-1440 ---------- -EGTSSSGNK RWVSQWASLA ANHTRHDQEE RIMELSVPVS BACU009617/1-1622 IQQTLVPLGF TEGASSSGNK RWVSQWASLA ANHTRHDQEE RIMELSVPVS 701 750 ENSTTRP00000006543/1-1594 LENDTDISES GLSVRSTGSA TSLASQGERK RRTLPQLPNE EKSLESSRTK ENSBTAP00000009955/1-1585 LEHDTDISES GISLRSTGSA ASLASQGERR RRTLPQLPSE EKSLESSRAK bmy_14577T0/1-1440 LENDTDISES GLSVRSTGSA TCLASQGERK RRTLPQLPNE EKSLESSRTK BACU009617/1-1622 LENDTDISES GLSVRSTGSA TSLASQGERK RRTLPQLPNE EKSLESSRTK 751 800 ENSTTRP00000006543/1-1594 VIAQRSEIGE KQDTELQEKE APTQVYQKDK QDAERALSKM NRAVNGETLK ENSBTAP00000009955/1-1585 VLAQRSEIGE KQDTELQEKE APAQVYQKDK QDTDRALSKI NRAVNGETLK bmy_14577T0/1-1440 VIAQRSEIGE KQDTELQEKE APTQVYQKDK QDAERALSKM NRAVNGETLK BACU009617/1-1622 VIAQRSEIGE KQDTELQEKE APTQVYQKDK QDAERALSKM NRAVNGETLK 801 850 ENSTTRP00000006543/1-1594 SGGDNKTLLH LGSSYSGKEK SENDKEASFV KQTLAKIQQQ EQKEQAQWTP ENSBTAP00000009955/1-1585 NGGDSKTLLH LGSSYSGKEK SETDKETSLV KQTLAKIQQQ EQKEQAQWTP bmy_14577T0/1-1440 SGGDNKTLLH LGSSYSGKEK SETDKEASFV KQTLAKIQQQ EQKEQAQWTP BACU009617/1-1622 SGGDNKTLLH LGSSYSGKEK SETDKEASFV KQTLAKIQQQ EQKEQAQWTP 851 900 ENSTTRP00000006543/1-1594 TKLSSSKNIS GQIDRCREEP FKQESQPQEK IPGLSTSKGE RVIQNEGKRR ENSBTAP00000009955/1-1585 TKLSSSKNIA GQIDRCREES FKQESQPQEK IPGLSAGKGE RAVQNEGKRR bmy_14577T0/1-1440 TKLSSSKNIS GQIDRCREEP FKQESQPQEK IPGLSTSKGE RVIQKEGKRR BACU009617/1-1622 TKLSSSKNIS GQIDRCREEP FKQESQPQEK IPGLSTSKGE RVIQNEGKRR 901 950 ENSTTRP00000006543/1-1594 KAEEILKSQT SKGGDKKESS KSLVRQGSFT IEKPSPNIPI ELIPHINKQA ENSBTAP00000009955/1-1585 KAEEILKSQT SKGGDKKESS KSLVRQGSFT IEKPSPNIPI ELIPHINKQP bmy_14577T0/1-1440 KAEEILKSQT SKGGDKKESS KSLVRQGSFT IEKPSPNIPI ELIPHINKQA BACU009617/1-1622 KAEEILKSQT SKGGDKKESS KSLVRQGSFT IEKPSPNIPI ELIPHINKQA 951 1000 ENSTTRP00000006543/1-1594 SST-SSLALT TASRIRERSD SMDTDSSLDT TLILKDTEAV MAFLEAKLRE ENSBTAP00000009955/1-1585 SSTPPSLALT TASRIRERSD SMDTDSSMDT TLILKDTEAV MAFLEAKLRE bmy_14577T0/1-1440 SSTSSSLALT TASRIRERSD SMDTDSSLDT TLILKDTEAV MAFLEAKLRE BACU009617/1-1622 SSTSSSLALT TASRIRERSD SMDTDSSLDT TLILKDTEAV MAFLEAKLRE 1001 1050 ENSTTRP00000006543/1-1594 DNKTDEGPDT PSYNRDNSIS PESDXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000009955/1-1585 DTKTDEGPDT PSYNRDNSIS PESDVDTAST ISLVTGETER KSTQKRKSFT bmy_14577T0/1-1440 DNKTDEGPDT PSYNRDNSIS PESDVDTAST ISLVTGETER KSTQKRKSFT BACU009617/1-1622 DNKTDEGPDT PSYNRDNSIS PESDVDTAST ISLVTGETER KSTQKRKSFT 1051 1100 ENSTTRP00000006543/1-1594 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000009955/1-1585 SLYKDRCSTG SPSKDVAKSS SSGAREKIEK KTKSRSADIG SRAEGRKFVQ bmy_14577T0/1-1440 SLYKDRCSTG SPSKDVTKSS SSGAREKIEK KTKSRSTDVG SRAEGRKFVQ BACU009617/1-1622 SLYKDRCSTG SPSKDVTKSS SSGAREKIEK KTKSRSTDVG SRAEGRKFVQ 1101 1150 ENSTTRP00000006543/1-1594 XXXXXXXPSV DLTDDDQTSS VPHSAISDVM SSDQETYSCK SHGRTPLTST ENSBTAP00000009955/1-1585 SSGRIRQPSV DLTDDDQTSS VPHSAISDVM SSDQETYSCK SHGRTPFTST bmy_14577T0/1-1440 SSGRIRQPSV DLTDDDQTSS VPHSAISDVM SSDQETYSCK SHGRTPLTST BACU009617/1-1622 SSGRIRQPSV DLTDDDQTSS VPHSAISDVM SSDQETYSCK SHGRTPLTST 1151 1200 ENSTTRP00000006543/1-1594 DEHARSKLEG SKVTKSKTSP GAPGSSSKST TLPRPRPTRT SLLRRARLGE ENSBTAP00000009955/1-1585 DEHAHSKLEG SKVTKSKTSP GAPGSSSKST TLPRPRPTRT SLLRRARLGE bmy_14577T0/1-1440 DEHAHSKLEG SKVTKSKTSP GAPGASSKST TLPRPRPTRT SLLRRARLGE BACU009617/1-1622 DEHAHSKLEG SKVTKSKTSP GAPGASSKST TLPRPRPTRT SLLRRARLGE 1201 1250 ENSTTRP00000006543/1-1594 ASDSELADAD KASVASEVST TSSTSKPPTG RRNISRIDLL AQPRRTRLGS ENSBTAP00000009955/1-1585 ASDSELADAD KASVASEVST TSSTSKPPTG RRNISRIDLL AQPRRTRLGS bmy_14577T0/1-1440 ASDSELADAD KASVASEVST TSSTSKPPTG RRNISRIDLL AQPRRTRLGS BACU009617/1-1622 ASDSELADAD KASVASEVST TSSTSKPPTG RRNISRIDLL AQPRRTRLGS 1251 1300 ENSTTRP00000006543/1-1594 LSARSDSEAT ISRSSASSRT AEAIIRSGAR LVPSDKFSPR IRANSISRLS ENSBTAP00000009955/1-1585 LSARSDSEAT ISRSSASSRT AEAIIRSGAR LVPSDKFSPR IRANSISRLS bmy_14577T0/1-1440 LSARSDSEAT ISRSSASSRT AEAIIRSGAR LVPSDKFSPR IRANSISRLS BACU009617/1-1622 LSARSDSEAT ISRSSASSRT AEAIIRSGAR LVPSDKFSPR IRANSISRLS 1301 1350 ENSTTRP00000006543/1-1594 DSKVKSMTST HGSPSVNARW RRFPTDYAST SEDEFGSNRN SPKHTRLRTS ENSBTAP00000009955/1-1585 DSKVKSMTSA HGSPSVNSRW RRFPTDYAST SEDEFGSNRN SPKHTRLRTS bmy_14577T0/1-1440 DSKVKSMTST HGSPSVNSRW RRFPTDYAST SEDEFGSNRN SPKHTRLRTS BACU009617/1-1622 DSKVKSMTST HGSPSVNSRW RRFPTDYAST SEDEFGSNRN SPKHTRLRTS 1351 1400 ENSTTRP00000006543/1-1594 PALKTTRLQS SGSAMPTSSS FKHRIKEQED YIRDWTAHRE EIARISQDLA ENSBTAP00000009955/1-1585 PALKTTRLQS SGSAMPTSSS FKHRIKEQED YIRDWTAHRE EIARISQDLA bmy_14577T0/1-1440 PALKTTRLQS SGSAMPTSSS FKHRIKEQED YIRDWTAHRE EIARISQDLA BACU009617/1-1622 PALKTTRLQS SGSAMPTSSS FKHRIKEQED YIRDWTAHRE EIARISQDLA 1401 1450 ENSTTRP00000006543/1-1594 LIAREINDVA GEIDSVTSSG TAPSTTVSTA ATTPGSAIDT REEVGDLHGE ENSBTAP00000009955/1-1585 LIAREINDVA GEIDSVTSSG TAPSTTVSTA ATTPGSAIDT REE------- bmy_14577T0/1-1440 LIAREINDVA GEIDSVTSSG TAPSTTVSTA ATTPGSAIDT RE-------- BACU009617/1-1622 LIAREINDVA GEIDSVTSSG TAPSTTVSTA ATTPGSAIDT REEVGDLHGE 1451 1500 ENSTTRP00000006543/1-1594 MHKLVDRVFD ESLNFRKIPP LVHSKTPEGN NCRSSDPRPQ PTEPPDHLTI ENSBTAP00000009955/1-1585 ---LVDRVFD ESLNFRKIPP LVHSKTPEGN NCRSSDPRPQ PAEPPDHLTI bmy_14577T0/1-1440 ---------- ---------- ---------- ---------- ---------- BACU009617/1-1622 MHKLVDRVFD ESLNFRKIPP LVHSKTPEGN NCRSSDPRPQ PAEPPDHLTI 1501 1550 ENSTTRP00000006543/1-1594 TRRRTWSRDE ---------- ---------- ---------- ILFKDKDRNW ENSBTAP00000009955/1-1585 TRRRTWSRDE VMGDNLLLSS VFQFSKKIRQ SIDKTAGKIR ILFKDKDRNW bmy_14577T0/1-1440 ---------E VMGDNLLLSS VFQFSRKIRQ SIDKTAGKIR ILFKDKDRNW BACU009617/1-1622 TRRRTWSRDE VMGDNLLLSS VFQFSRKIRQ SIDKTAGKIR ILFKDKDRNW 1551 1600 ENSTTRP00000006543/1-1594 DEIESKLRAE SEVPIVKTSS MEISSILQEL KRVEKQLQAI NAMIDPDGTL ENSBTAP00000009955/1-1585 DEIESKLRAE SEVPIVKTSS MEISSILQEL KRVEKQLQAI NAMIDPDGTL bmy_14577T0/1-1440 DEIESKLRAE SEVPIVKTSS MEISSILQEL KRVEKQLQAI NAMIDPDGTL BACU009617/1-1622 DEIESKLRAE SEVPIVKTSS MEISSILQEL KRVEKQLQAI NAMIDPDGTL 1601 1650 ENSTTRP00000006543/1-1594 EALNNMGFPS AILPSPSKQK SSPVNNHSSP GQTPTLCQPE ARVLHPAAVS ENSBTAP00000009955/1-1585 EALNNMGFPS AILPSPPKQK SSPVNDHSSP GQTPTLCQPE ARVLHPAAGA bmy_14577T0/1-1440 EALNNMGFPS AILPSPSKQK SSPVNNHSSP GQTPTLCQPE ARVLHPAAVS BACU009617/1-1622 EALNNMGFSS AILPSPSKQK SSPVNNHSSP GQTPTLCQPE ARVLHPAAVS 1651 1700 ENSTTRP00000006543/1-1594 VSAEFENAES EADFSIHFNR FNPDGEEEDV IVHE ENSBTAP00000009955/1-1585 VSAEFENAES EADFSIHFNR FNPDGEEEDV TVQE bmy_14577T0/1-1440 VSAEFENAES EADFSIHFNR FNPDGEEEDV TVHE BACU009617/1-1622 VSAEFENAES EADFSIHFNR FNPDGEEEDV TVHE