KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:52 2014 Check: 00 .. Name: bmy_21064T0/1-346 Len: 489 Check: 6322 Weight: 1.00 Name: ENSTTRP00000012051/1-488 Len: 489 Check: 2770 Weight: 1.00 Name: ENSBTAP00000009970/1-474 Len: 489 Check: 7377 Weight: 1.00 Name: ENSP00000296328/1-489 Len: 489 Check: 2121 Weight: 1.00 Name: BACU003812/1-489 Len: 489 Check: 1208 Weight: 1.00 // 1 50 bmy_21064T0/1-346 ---------- ---------- ---------- ---MLETYHN NLEVAVAMFL ENSTTRP00000012051/1-488 MAAHGGSAAS SALKGLIQQF TAITGASESV GKHMLEACNN NLEMAVTMFL ENSBTAP00000009970/1-474 ---------- -----LFSCF YTISGASESV GKHMLEACNN NLEMAVTMFL ENSP00000296328/1-489 MAAHGGSAAS SALKGLIQQF TTITGASESV GKHMLEACNN NLEMAVTMFL BACU003812/1-489 MAAHGGSAAS SALKGLIQQF TAITGASESV GKHMLEACNN NLEMAVTMFL 51 100 bmy_21064T0/1-346 DGGGMAEEPS TSSASVSTVR SHTDEEVRAS VSQKQEILVE LEPLFGAPKR ENSTTRP00000012051/1-488 DGGGIAEEPS TSSASVSTVR PHTEEEVRAP IPQKQEILVE PEPLFGAPKR ENSBTAP00000009970/1-474 DGGGIAEEPS TSSASVSTVR PHTEEEVRAP IPQKQEILVE PEPLFGAPKR ENSP00000296328/1-489 DGGGIAEEPS TSSASVSTVR PHTEEEVRAP IPQKQEILVE PEPLFGAPKR BACU003812/1-489 DGGGIAEEPS TSSASVSTVR PHTEEEVRAP IPQKQEILVE PEPLFGAPKR 101 150 bmy_21064T0/1-346 RQPARSIFGG FRDFQTETLR QEQELRNAGA LDKKRTTLAE LFWPPIDLMH ENSTTRP00000012051/1-488 RRPARSIFDG FRDFQTETIR QEQELRNGGA IDKKLTTLAD LFRPPIDLMH ENSBTAP00000009970/1-474 RRPARSIFDG FRDFQTETIR QEQELRNGGA IDKKLTTLAD LFRPPIDLMH ENSP00000296328/1-489 RRPARSIFDG FRDFQTETIR QEQELRNGGA IDKKLTTLAD LFRPPIDLMH BACU003812/1-489 RRPARSIFDG FRDFQTETIR QEQELRNGGA IDKKLTTLAD LFRPPIDLMH 151 200 bmy_21064T0/1-346 EGSLETAKEC GQMQNKWLMI NIQNVQDFAC QCLNREVRSK EDVENIIREH ENSTTRP00000012051/1-488 KGSFETAKEC GQMQNKWLMI NIQNVQDFAC QCLNRDVWSN EAVKNIIREH ENSBTAP00000009970/1-474 KGSFETAKEC GQMQNKWLMI NIQNVQDFAC QCLNRDVWSN EAVKNIIREH ENSP00000296328/1-489 KGSFETAKEC GQMQNKWLMI NIQNVQDFAC QCLNRDVWSN EAVKNIIREH BACU003812/1-489 KGSFETAKEC GQMQNKWLMI NIQNVQDFAC QCLNRDVWSN EAVKNIIREH 201 250 bmy_21064T0/1-346 FIFWQVYHDS EESQRYIQFY KLGDLPYVST LDPGTGQKLV EWYQLDLSSF ENSTTRP00000012051/1-488 FIFWQXXXXX XXXXXYIQFY KLGDFPYVSI LDPRTGQKLV EWHQLDVSSF ENSBTAP00000009970/1-474 FIFWQVYHDS EEGQRYIQFY KLGDFPYVSI LDPRTGKKLV EWHQLDVSSF ENSP00000296328/1-489 FIFWQVYHDS EEGQRYIQFY KLGDFPYVSI LDPRTGQKLV EWHQLDVSSF BACU003812/1-489 FIFWQVYHDS EEGQRYIQFY KLGDFPYVSI LDPRTGQKLV EWHQLDVSSF 251 300 bmy_21064T0/1-346 LD-------- ---------- ---------- ---------- ---------- ENSTTRP00000012051/1-488 LDQVTGFLGE HGQLDGLSSS PPKKCARSES LIDASEDSQL EAAIRASLQE ENSBTAP00000009970/1-474 LDQVTGFLGE HGQLDGLSSS PPKKCARSES LIDASEDSQL EAAIRASLQE ENSP00000296328/1-489 LDQVTGFLGE HGQLDGLSSS PPKKCARSES LIDASEDSQL EAAIRASLQE BACU003812/1-489 LDQVTGFLGE HGQLDGLSSS PPKKCARSES LIDASEDSQL EAAIRASLQE 301 350 bmy_21064T0/1-346 ------QAKQ DSRSDEESES EFFSGSEEFI SVCVSDEEEE IENPAKSGKS ENSTTRP00000012051/1-488 THFDSTQTKQ DSRSDEESES ELFSGSEEFI SVCGSDEEEE IENLAKSRKS ENSBTAP00000009970/1-474 THFDSTQTKQ DSRSDEESES ELFSGSEEFI SVCGSDEEEE IENLAKSRKS ENSP00000296328/1-489 THFDSTQTKQ DSRSDEESES ELFSGSEEFI SVCGSDEEEE VENLAKSRKS BACU003812/1-489 THFDSTQTKQ DSRSDEESES ELFSGSEEFI SVCGSDEEEE IENLAKSRKS 351 400 bmy_21064T0/1-346 XHKDLGHRKE ENRRSLAEPP ARTEPGTATN HQGLPAVDSE XLXMPPEKSD ENSTTRP00000012051/1-488 PHKDLGHRKE ENRRSLTEPP ARTEPGTATN HQGLPAMDSE ILEMSPEKSD ENSBTAP00000009970/1-474 PHKDLGHRKE ENRRSMTEPP ARTEPGTATN HQGLPVMDSE ILEMSPEKSD ENSP00000296328/1-489 PHKDLGHRKE ENRRPLTEPP VRTDPGTATN HQGLPAVDSE ILEMPPEKAD BACU003812/1-489 PHKDLGHRKE ENRRSLTEPP ARTEPGTATN HQGLPAMDSE ILEMSPEKSD 401 450 bmy_21064T0/1-346 GILEGIDVNG PKAQLMLRYP DGKKR----- ---------- ---------- ENSTTRP00000012051/1-488 GIVEGIDVNG PKAQLMLRYP DGKREQITLP EQAKLLAL-K HVQSKGYPNE ENSBTAP00000009970/1-474 GIVEGIDVNG PKAQLMLRYP DGKREQITLP EQAKLLALVK HVQSKGYPNE ENSP00000296328/1-489 GVVEGIDVNG PKAQLMLRYP DGKREQITLP EQAKLLALVK HVQSKGYPNE BACU003812/1-489 GIVEGIDVNG PKAQLMLRYP DGKREQITLP EQAKLLALVK HVQSKGYPNE 451 500 bmy_21064T0/1-346 -----TNHSS RAS------- ---------- --------- ENSTTRP00000012051/1-488 RFELLTNFPR RKLSHLDYDI TLQEAGLCPQ ETVFVQERN ENSBTAP00000009970/1-474 RFELLTNFPR RKLSHLDYDI TLQEAGLCPQ ETVFVQERN ENSP00000296328/1-489 RFELLTNFPR RKLSHLDYDI TLQEAGLCPQ ETVFVQERN BACU003812/1-489 RFELLTNFPR RKLSHLDYDI TLQEAGLCPQ ETVFVQERN