KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:39:53 2014 Check: 00 .. Name: bmy_08175T0/1-595 Len: 809 Check: 3808 Weight: 1.00 Name: ENSBTAP00000009971/1-609 Len: 809 Check: 3305 Weight: 1.00 Name: BACU004685/1-631 Len: 809 Check: 993 Weight: 1.00 Name: ENSTTRP00000000352/1-602 Len: 809 Check: 8647 Weight: 1.00 // 1 50 bmy_08175T0/1-595 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009971/1-609 ---------- ---------A IGEYEDLRAE NQKTKEKCDK IRQERDEAVK BACU004685/1-631 MNSSDEEKQL QLISSLKEQA IGEYEDLRAE NQKTKEKCDK IRQERDEAVK ENSTTRP00000000352/1-602 ---------- ---------- IGEYEDLRAE NQKTKEKCDK IRQERDEAVK 51 100 bmy_08175T0/1-595 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009971/1-609 KLEEFQKISH MVIEEVNFMQ NHLEIEKTCR ESAEALATKL NKENKALKRI BACU004685/1-631 KLEEFQKISH MVIEEVNFMQ NHLEIEKTCR ESAEALATKL NKENKALKRI ENSTTRP00000000352/1-602 KLEEFQKISH MVIEEVNFMQ NHLEIEKTCR ESAEALATKL NKENKALKRI 101 150 bmy_08175T0/1-595 MLLLYCKIG- ---------- ---------- ---------- ---------- ENSBTAP00000009971/1-609 SMLYMAKLGP DVITEEINID DEDSAMDPED VAKTCVSVQC QKQIKELRDQ BACU004685/1-631 SMLYMAKLGP DVITEEINID DEDSTMDPEG AAETCVSVQC QKQIKELRDQ ENSTTRP00000000352/1-602 SMLYMAKLGP DVITEEINID DEDSTMDPEG AAETCVSVQC QKQIKELRDQ 151 200 bmy_08175T0/1-595 LIS------- ---------- ---------- ---------- ---------- ENSBTAP00000009971/1-609 IVSVQEEKKI LAIELENLKS RLVEVTEEVN KVKQEKDVLN LEVLEQRKVL BACU004685/1-631 IVSVQEEKKI LAIELENLKS KLVEVIEEVN KVKQEKDVLN SEVLEQRKVL ENSTTRP00000000352/1-602 IVSVQEEKKI LAIELENLKS KLVEVIEEVN KVKQEKDVLN SEVLEQRKVL 201 250 bmy_08175T0/1-595 ---------- ---------- -EFEKHFMLG VTHWLTCMFI EQNKLKRQSH ENSBTAP00000009971/1-609 EKCNRVSMLA VEEYEEMQVN LELEKDLRKK AESFAQEMFI EQNKLKRQSH BACU004685/1-631 EKCNRVSMLA VEEYEEMQVN LELEKDLRKK AESFAQEMFI EQNKLKRQSH ENSTTRP00000000352/1-602 EKCNRVSMLA VEEYEEMQVN LELEKDLRKK AESFAQEMFI EQNKLKRQSH 251 300 bmy_08175T0/1-595 LLLQNSAPDQ QLLKALDENA KLIQLLEEER IEHQQKVKKL EEQLQNETLR ENSBTAP00000009971/1-609 LLLQSSAPDR QLLNALDENA KLVQLLEEER IQHQQKVKEL EEQLQNETFH BACU004685/1-631 LLLQNSAPDQ QLLKALDENA KLIQLLEGER IEHQQKVKKL EEQLQNETLR ENSTTRP00000000352/1-602 LLLQNSAPDQ QLLKALDENA KLIQLLEEER IEHQQKVKKL EEQLQNETLR 301 350 bmy_08175T0/1-595 KEMHNLKQQL DLLEEDKKEL ELKYQNSEEK ARNLKHSVDE LQKRVNQSEN ENSBTAP00000009971/1-609 KEIHSLKQQL ELLEEDKKEL ELKYQNSEEK ARNLKHSVDE LQKRVNQSEN BACU004685/1-631 KEMHNLKQQL ELLEEDKKEL ELKYQNSEEK ARNLKHSVDE LQKRVNQSEN ENSTTRP00000000352/1-602 KEMHNLKQQL ELLEEDKKEL ELKYQNSEEK ARNLKHSVDE LQKRVNQSEN 351 400 bmy_08175T0/1-595 SVPPP-PPPP PPLPPPPPNP IRSLMSMIRK RSHPSGSGAK KEKAAQPETA ENSBTAP00000009971/1-609 SVPPPPPPPP PPPPPPPPNP IRSLMSMIRK RSHSSSGGAK KEKAAQPETT BACU004685/1-631 SVPPP-PPPP PPLPPPPPNP IRSLMSMIRK RSHPSGSGAK KEKAAQPETA ENSTTRP00000000352/1-602 SVPPP-PPPP PPLPPPPPNP IRSLMSMIRK RSHPSGSGAK KEKAAQPETA 401 450 bmy_08175T0/1-595 EEVTDLKRQA VEEMMDRIKK GVHLRPVNQT ARPKAKPESS KVSESAVNEL ENSBTAP00000009971/1-609 EEVTDLKRQA VEEMMDRIKK GVHLRPVNQT ARPNAKPESA KGSESAVNEL BACU004685/1-631 EEVTDLKRQA VEEMMDRIKK GVHLRPVNQT ARPKAKPESS KGSESAVNEL ENSTTRP00000000352/1-602 EEVTDLKRQA VEEMMDRIKK GVHLRPVNQT ARPKAKPESS KGSESAVNEL 451 500 bmy_08175T0/1-595 KGILGTLNKS TSSRSLKSLH IENSETELER ILRRRKLTTE ADSSSPTGIL ENSBTAP00000009971/1-609 KGMLGTLNKS TSSRSLKSLH IENSETELER ILRRRKLTTE ADSSSPTGIL BACU004685/1-631 KGILGTLNKS TSSRSLKSLH IENSETELER ILRRRKLTTE ADSSSPTGIL ENSTTRP00000000352/1-602 KGILGTLNKS TSSRSLKSLH IENSETELER ILRRRKLTTE ADSSSPTGIL 501 550 bmy_08175T0/1-595 ATSESKSMPV LGSVSSVTKT ALNKKTLEAE FNSPSPPTPE PGEGSCKLEG ENSBTAP00000009971/1-609 ATSESKSMPV LGSVSSVTKT ALNKKTLEAE FNSPPPPTPE PGEGSCKWEG BACU004685/1-631 ATSESKSMPV LGSVSSVTKT ALNKKTLEAE FNSPSPPTPE PGEGSCKLEG ENSTTRP00000000352/1-602 ATSESKSMPV LGSVSSVTKT ALNKKTLEAE FNSPSPPTPE PGEGSCKLEG 551 600 bmy_08175T0/1-595 CTSSKVTFQM SAGLSHKEKE EFYLISLCLK NNLNQKILQL LPSFVCLLFS ENSBTAP00000009971/1-609 CSSSKVTFQP PSNTGYRKQ- ---------- ---------- ---------- BACU004685/1-631 CTSSKVTFQP PSNTGCRRQ- ---------- ---------- ---------- ENSTTRP00000000352/1-602 CTSSKVTFQP PSNTGCRKQ- ---------- ---------- ---------- 601 650 bmy_08175T0/1-595 KMPLHSGNGT LILICGDTTV VFFRSHLHSV LHIFCIFEPT QDKVIRDNRI ENSBTAP00000009971/1-609 ----YTGSGK ---------- ---QAKPVVV LDPVSTHEP- ---------- BACU004685/1-631 ----YIGSEK ---------- ---QAEPVVV LDPVSTYEP- ---------- ENSTTRP00000000352/1-602 ----YIGSEK ---------- ---QAEPVVV LDPVSTYEP- ---------- 651 700 bmy_08175T0/1-595 PSCKRKIRLC SLPQVDRKVC DVSKYVRPVA PHRFIFLRSQ WIFHGDLKLY ENSBTAP00000009971/1-609 ---------- ---------- ---------- ---------- ---------- BACU004685/1-631 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000352/1-602 ---------- ---------- ---------- ---------- ---------- 701 750 bmy_08175T0/1-595 KITKSLKSSQ KRVSERNNKN YLCCNATTVH CCSNCIKGLG GKKKKLLYKD ENSBTAP00000009971/1-609 -------QTK DQVAEKD--- ---------- ---------- ---------- BACU004685/1-631 -------QTK DHVAEKD--- ---------- ---------- ---------- ENSTTRP00000000352/1-602 -------QTK DQVAEKD--- ---------- ---------- ---------- 751 800 bmy_08175T0/1-595 KFKSFHFLSL KVNAALSSPV TQSDKSLSPF IIKFNFGNTT CNCSDSSDEE ENSBTAP00000009971/1-609 ---------- --------PA QHKDDE---- ------GETK PGYK----QR BACU004685/1-631 ---------- --------PT QHKDDE---- ------GEIK PEYKEDSVEK ENSTTRP00000000352/1-602 ---------- --------PA QHKDDE---- ------GEIK PEDKEDSVEK 801 850 bmy_08175T0/1-595 LKKKN---- ENSBTAP00000009971/1-609 VRDTSSSNC BACU004685/1-631 IRDTDSSNC ENSTTRP00000000352/1-602 ---------